Eucgr.H00552 (Eucalyptus grandis)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Eucgr.H00552 T300965_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.H00552.1 NFX 253 270
Eucgr.H00552.1 NFX 308 326
Eucgr.H00552.1 NFX 372 390
Eucgr.H00552.1 NFX 430 448
Eucgr.H00552.1 NFX 486 497
Eucgr.H00552.1 NFX 524 542
Eucgr.H00552.1 NFX 581 598
Eucgr.H00552.1 NFX 634 650
Eucgr.H00552.1 NFX 663 694

Links

Other NFX family TFs
Other Eucalyptus grandis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.850
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.844
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.844
TCM_012484 Theobroma cacao TCM_012484 N 0.844
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.843
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.838
TCM_017029 Theobroma cacao TCM_017029 N 0.835
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.825
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.825
Bo5g010600 Brassica oleracea Bo5g010600 N 0.819
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.819
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.819
Bra019958 Brassica rapa Bra019958 N 0.819
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.819
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.819
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.815
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.815
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.809
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.806
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.806
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.806
PK00983.1 Cannabis sativa PK00983.1 N 0.806
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.800
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.787
Cla018720 Citrullus lanatus Cla018720 N 0.781
Bra031704 Brassica rapa Bra031704 N 0.764
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.750
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.750
Pm025049 Prunus mume Pm025049 N 0.750
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.750
Bra018458 Brassica rapa Bra018458 N 0.744
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.744
MDP0000280911 Malus domestica MDP0000280911 N 0.738
Bo8g059130 Brassica oleracea Bo8g059130 N 0.738
27791.m000083 Ricinus communis 27791.m000083 N 0.738
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.731
Ca_16794 Cicer arietinum Ca_16794 N 0.719
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.713
mgf004430m Mimulus guttatus mgf004430m N 0.706