CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K02284
(
Eucalyptus grandis
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Eucgr.K02284
T300967_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K02284.1
NFX
106
123
CPHVCVLQCHPGPCPPCK
Eucgr.K02284.1
NFX
161
179
CGRHWCGETCHVGPCDPCH
Eucgr.K02284.1
NFX
225
243
CGNHKCHEICHPGPCGECE
Eucgr.K02284.1
NFX
283
301
CGIHRCKDKCHAGDCAPCL
Eucgr.K02284.1
NFX
339
352
CGRHRCSDRCCPQS
Eucgr.K02284.1
NFX
371
389
CGQHSCEVLCHSGHCPPCL
Eucgr.K02284.1
NFX
428
445
CGHAPSHSCHFGDCPPCS
Eucgr.K02284.1
NFX
482
501
CGLHACGRTCHPAPCDVDTP
Eucgr.K02284.1
NFX
510
541
CGQVCGAPRRACRHTCKAPCHPSSPCPDVRCK
Links
Other
NFX
family TFs
Other
Eucalyptus grandis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10025071.g
Linum usitatissimum
Lus10025071.g
N
0.844
Gorai.006G058600
Gossypium raimondii
Gorai.006G058600
N
0.843
cassava4965.m1
Manihot esculenta
cassava4965.m1
N
0.827
Lus10034470.g
Linum usitatissimum
Lus10034470.g
N
0.827
TCM_012484
Theobroma cacao
TCM_012484
N
0.825
GLYMA09G30343
Glycine max
GLYMA09G30343
N
0.821
GLYMA07G11834
Glycine max
GLYMA07G11834
N
0.819
POPTR_0012s04070
Populus trichocarpa
POPTR_0012s04070
N
0.815
Cucsa.122080
Cucumis sativus
Cucsa.122080
N
0.815
Eucgr.H00552
Eucalyptus grandis
Eucgr.H00552
N
0.809
GLYMA08G06040
Glycine max
GLYMA08G06040
N
0.809
PK00983.1
Cannabis sativa
PK00983.1
N
0.806
ATNFXL1
Arabidopsis lyrata
fgenesh2_kg.1__1086__AT1G10170.1
N
0.806
orange1.1g001378m.g
Citrus sinensis
orange1.1g001378m.g
N
0.802
TCM_017029
Theobroma cacao
TCM_017029
N
0.802
Ciclev10018607m.g
Citrus clementina
Ciclev10018607m.g
N
0.802
ATNFXL1
Arabidopsis thaliana
AT1G10170
N
0.802
Bra019958
Brassica rapa
Bra019958
N
0.790
Bo5g010600
Brassica oleracea
Bo5g010600
N
0.790
Aquca_044_00077
Aquilegia coerulea
Aquca_044_00077
N
0.784
Aquca_032_00102
Aquilegia coerulea
Aquca_032_00102
N
0.784
Cla018720
Citrullus lanatus
Cla018720
N
0.778
Sb10g009070
Sorghum bicolor
Sb10g009070
N
0.772
GRMZM2G087787
Zea mays
GRMZM2G087787
N
0.772
Carubv10008145m.g
Capsella rubella
Carubv10008145m.g
N
0.772
Cagra.1508s0074
Capsella grandiflora
Cagra.1508s0074
N
0.772
fgenesh1_pg.C_scaffold_1003098
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1003098
N
0.769
Sb04g038100
Sorghum bicolor
Sb04g038100
N
0.765
Bra031704
Brassica rapa
Bra031704
N
0.758
PRUPE_ppa000543mg
Prunus persica
PRUPE_ppa000543mg
N
0.728
Pm025049
Prunus mume
Pm025049
N
0.728
27791.m000083
Ricinus communis
27791.m000083
N
0.722
SapurV1A.0082s0290
Salix purpurea
SapurV1A.0082s0290
N
0.722
Ca_16794
Cicer arietinum
Ca_16794
N
0.716
Bo8g059130
Brassica oleracea
Bo8g059130
N
0.716
MDP0000280911
Malus domestica
MDP0000280911
N
0.710
mgf004430m
Mimulus guttatus
mgf004430m
N
0.704
Bra018458
Brassica rapa
Bra018458
N
0.704