CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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evm.TU.supercontig_19.173
(
Carica papaya
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
evm.TU.supercontig_19.173
T300968_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_19.173
NFX
194
211
CGHFCLLLCHPGPCPSCP
evm.model.supercontig_19.173
NFX
246
264
CKIHKCTEICHDGSCPPCK
evm.model.supercontig_19.173
NFX
299
317
CGKHVCERGCHSGDCGDCP
evm.model.supercontig_19.173
NFX
353
372
CGFHKCPERCHRGPCIETCR
evm.model.supercontig_19.173
NFX
406
424
CGRHACKRKCCDGDCPPCA
evm.model.supercontig_19.173
NFX
427
451
CGRRLRCKNHKCPAPCHQGSCAPCP
evm.model.supercontig_19.173
NFX
498
510
PHKCHYGACPTCK
evm.model.supercontig_19.173
NFX
519
530
CGHKCQLRCHGP
evm.model.supercontig_19.173
NFX
601
612
CGNHYCTKTCHA
evm.model.supercontig_19.173
NFX
644
661
CQHPCPLPCHSGECPSCK
Links
Other
NFX
family TFs
Other
Carica papaya
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy