orange1.1g001378m.g (Citrus sinensis)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 orange1.1g001378m.g T300982_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g001376m NFX 226 243
orange1.1g001376m NFX 271 299
orange1.1g001376m NFX 345 363
orange1.1g001376m NFX 403 421
orange1.1g001376m NFX 460 471
orange1.1g001376m NFX 498 516
orange1.1g001376m NFX 555 572
orange1.1g001376m NFX 608 627
orange1.1g001376m NFX 636 667
orange1.1g001377m NFX 226 243
orange1.1g001377m NFX 271 299
orange1.1g001377m NFX 345 363
orange1.1g001377m NFX 403 421
orange1.1g001377m NFX 460 471
orange1.1g001377m NFX 498 516
orange1.1g001377m NFX 555 572
orange1.1g001377m NFX 608 627
orange1.1g001377m NFX 636 667
orange1.1g001378m NFX 226 243
orange1.1g001378m NFX 271 299
orange1.1g001378m NFX 345 363
orange1.1g001378m NFX 403 421
orange1.1g001378m NFX 460 471
orange1.1g001378m NFX 498 516
orange1.1g001378m NFX 555 572
orange1.1g001378m NFX 608 627
orange1.1g001378m NFX 636 667

Links

Other NFX family TFs
Other Citrus sinensis TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.988
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.862
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.858
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.852
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.852
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.846
Bo5g010600 Brassica oleracea Bo5g010600 N 0.840
Bra019958 Brassica rapa Bra019958 N 0.840
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.840
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.840
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.833
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.833
PK00983.1 Cannabis sativa PK00983.1 N 0.827
TCM_012484 Theobroma cacao TCM_012484 N 0.827
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.821
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.819
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.815
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.815
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.815
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.815
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.815
TCM_017029 Theobroma cacao TCM_017029 N 0.815
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.806
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.802
Bra031704 Brassica rapa Bra031704 N 0.795
Cla018720 Citrullus lanatus Cla018720 N 0.790
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.778
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.778
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.772
27791.m000083 Ricinus communis 27791.m000083 N 0.753
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.747
MDP0000280911 Malus domestica MDP0000280911 N 0.747
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.747
Pm025049 Prunus mume Pm025049 N 0.747
Bo8g059130 Brassica oleracea Bo8g059130 N 0.735
Bra018458 Brassica rapa Bra018458 N 0.728