CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J07154
(
Panicum virgatum
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Pavir.J07154
T300985_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J07154.1.p
NFX
195
228
CGDVCGRRLNANLDSGCEHTCLLLCHPGPCPPCP
Pavir.J07154.1.p
NFX
264
282
CGLHRCPVNCHDGPCPPCA
Pavir.J07154.1.p
NFX
317
335
CGKHRCERGCHGGKCGECP
Pavir.J07154.1.p
NFX
371
390
CGRHRCPERCHRGPCDETCR
Pavir.J07154.1.p
NFX
424
442
CGRHACKRRCCAGDCPPCS
Pavir.J07154.1.p
NFX
451
469
CGNHKCLSPCHRGACSPCP
Pavir.J07154.1.p
NFX
514
528
CRPHKCHYGACPPCK
Pavir.J07154.1.p
NFX
537
548
CGHTCKERCHGP
Pavir.J07154.1.p
NFX
619
630
CGNHYCTKSCHV
Pavir.J07154.1.p
NFX
669
688
PPCSHRCPLPCHLSDCPPCK
Links
Other
NFX
family TFs
Other
Panicum virgatum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy