CBG01250 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG01250 T301427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG01250
M02391_2.00
Caenorhabditis briggsae
WBYGTGTC

GACACRVW
PBM
Weirauch et al.(2014)
pTH6110
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH

DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.851 0.580
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN

NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.851 0.580
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02391_2.00 Nuclear receptor 1 72

DNA Binding Domains

Protein ID Domain From To Sequence
CBG01250 Nuclear receptor 9 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBG01243 Caenorhabditis briggsae CBG01243 I 0.796
CBG01248 Caenorhabditis briggsae CBG01248 I 0.780
CBG01251 Caenorhabditis briggsae CBG01251 I 0.776
CBG01353 Caenorhabditis briggsae CBG01353 I 0.771
CBG06387 Caenorhabditis briggsae CBG06387 I 0.886
CBG17906 Caenorhabditis briggsae CBG17906 I 0.795
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.863
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.745
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.851
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.804
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.888
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.882
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.855
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.886
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.775
CJA19466 Caenorhabditis japonica CJA19466 I 0.841
CRE18698 Caenorhabditis remanei CRE18698 I 0.779
CRE08755 Caenorhabditis remanei CRE08755 I 0.925
CRE08754 Caenorhabditis remanei CRE08754 I 0.932
CRE08753 Caenorhabditis remanei CRE08753 I 0.912
CRE02541 Caenorhabditis remanei CRE02541 I 0.769
CRE08760 Caenorhabditis remanei CRE08760 I 0.879