CBG04240 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG04240 T301455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.859 0.645
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG04240 Nuclear receptor 61 122

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE24933 Caenorhabditis remanei CRE24933 I 0.984
CJA06107 Caenorhabditis japonica CJA06107 I 0.979
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.979
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.979
CBN32300 Caenorhabditis brenneri CBN32300 I 0.976
CRE26423 Caenorhabditis remanei CRE26423 I 0.976
CBN04415 Caenorhabditis brenneri CBN04415 I 0.976
CJA02727 Caenorhabditis japonica CJA02727 I 0.976
CBG13142 Caenorhabditis briggsae CBG13142 I 0.976
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.956
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.952
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.948
L892_g3438 Steinernema scapterisci L892_g3438 I 0.946
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.945
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.943
L889_g16305 Steinernema feltiae L889_g16305 I 0.943
L893_g6565 Steinernema glaseri L893_g6565 I 0.943
L892_g17146 Steinernema scapterisci L892_g17146 I 0.943
L898_g5338 Steinernema monticolum L898_g5338 I 0.943
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.942
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.942
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.942
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.942
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.942
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.942
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.942
CRE29874 Caenorhabditis remanei CRE29874 I 0.942
CJA14611 Caenorhabditis japonica CJA14611 I 0.942
CBN28641 Caenorhabditis brenneri CBN28641 I 0.942
CBG03466 Caenorhabditis briggsae CBG03466 I 0.942
L893_g33656 Steinernema glaseri L893_g33656 I 0.939
L898_g9613 Steinernema monticolum L898_g9613 I 0.939
L889_g15424 Steinernema feltiae L889_g15424 I 0.939
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.935
L892_g17832 Steinernema scapterisci L892_g17832 I 0.930
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.930
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.924
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.918
L893_g5404 Steinernema glaseri L893_g5404 I 0.918
L889_g366 Steinernema feltiae L889_g366 I 0.918
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.918
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.918
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.916
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.914
CJA19445 Caenorhabditis japonica CJA19445 I 0.914
CBG03860 Caenorhabditis briggsae CBG03860 I 0.913
CRE08264 Caenorhabditis remanei CRE08264 I 0.913
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.913
CBN05776 Caenorhabditis brenneri CBN05776 I 0.913
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.912
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.912
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.912
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.912
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.912
CRE22212 Caenorhabditis remanei CRE22212 I 0.910
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.892
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.871
L893_g263 Steinernema glaseri L893_g263 I 0.871
L889_g31970 Steinernema feltiae L889_g31970 I 0.871
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.871
ASU_00971 Ascaris suum ASU_00971 I 0.871
L898_g11608 Steinernema monticolum L898_g11608 I 0.871
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.871
CJA14248 Caenorhabditis japonica CJA14248 I 0.869
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.868
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.863
PPA14696 Pristionchus pacificus PPA14696 I 0.861
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.859
CRE10779 Caenorhabditis remanei CRE10779 I 0.856
CBG22587 Caenorhabditis briggsae CBG22587 I 0.856
CRE07033 Caenorhabditis remanei CRE07033 I 0.856
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.851
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.851
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.851
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.851
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.850
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.850
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.848
LOAG_07549 Loa loa LOAG_07549 I 0.848
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.848
CJA14035 Caenorhabditis japonica CJA14035 I 0.848
L898_g18440 Steinernema monticolum L898_g18440 I 0.848
CBN08474 Caenorhabditis brenneri CBN08474 I 0.848
CRE21925 Caenorhabditis remanei CRE21925 I 0.848
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.848
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.848
L889_g25097 Steinernema feltiae L889_g25097 I 0.848
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.848
Bm5457 Brugia malayi Bm5457 I 0.848
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.848
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.848
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.848
L892_g186 Steinernema scapterisci L892_g186 I 0.848
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.848
CBG22776 Caenorhabditis briggsae CBG22776 I 0.848
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.848
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.848
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.848
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.848
NECAME_02375 Necator americanus NECAME_02375 I 0.845
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.845
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.845
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.845
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.845
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.845
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.845
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.843
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.842
L893_g6023 Steinernema glaseri L893_g6023 I 0.835
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.834
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N 0.828
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.827
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.825
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.817
CRE09416 Caenorhabditis remanei CRE09416 I 0.806
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.806
CBG14996 Caenorhabditis briggsae CBG14996 I 0.795
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.792
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.792
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.792
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.792
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.792
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.784
L892_g23093 Steinernema scapterisci L892_g23093 I 0.766
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.766
Minc11307 Meloidogyne incognita Minc11307 I 0.766
L898_g32368 Steinernema monticolum L898_g32368 I 0.763
L889_g2977 Steinernema feltiae L889_g2977 I 0.762
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.762
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.759
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.756