CBG09320 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG09320 T301502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR

YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.987 0.914
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.871 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG09320 Nuclear receptor 45 115

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CRE31070 Caenorhabditis remanei CRE31070 I 0.992
CBN28290 Caenorhabditis brenneri CBN28290 I 0.988
CBN21486 Caenorhabditis brenneri CBN21486 I 0.988
CJA28065 Caenorhabditis japonica CJA28065 I 0.988
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.987
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.943
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.931
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.921
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.920
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.916
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.916
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.916
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.913
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.908
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.907
CRE08691 Caenorhabditis remanei CRE08691 I 0.905
CJA09697 Caenorhabditis japonica CJA09697 I 0.905
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.903
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.903
CBG06601 Caenorhabditis briggsae CBG06601 I 0.901
CBG06611 Caenorhabditis briggsae CBG06611 I 0.901
CRE18430 Caenorhabditis remanei CRE18430 I 0.901
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.900
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.898
CRE30948 Caenorhabditis remanei CRE30948 I 0.893
CBG09567 Caenorhabditis briggsae CBG09567 I 0.887
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.886
CBG15881 Caenorhabditis briggsae CBG15881 I 0.881
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.880
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.871
CBG22870 Caenorhabditis briggsae CBG22870 I 0.870
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.866
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.860
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.858
L898_g19019 Steinernema monticolum L898_g19019 I 0.854
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.851
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.849
L889_g6792 Steinernema feltiae L889_g6792 I 0.838
CBG20727 Caenorhabditis briggsae CBG20727 I 0.836
CRE05044 Caenorhabditis remanei CRE05044 I 0.834
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.828
L898_g12798 Steinernema monticolum L898_g12798 I 0.822
CBG20729 Caenorhabditis briggsae CBG20729 I 0.820
L892_g10843 Steinernema scapterisci L892_g10843 I 0.818
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.818
L898_g3512 Steinernema monticolum L898_g3512 I 0.817
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.814
CRE15644 Caenorhabditis remanei CRE15644 I 0.812
CBN23838 Caenorhabditis brenneri CBN23838 I 0.812
L893_g27930 Steinernema glaseri L893_g27930 I 0.811
L889_g6798 Steinernema feltiae L889_g6798 I 0.805
CRE15675 Caenorhabditis remanei CRE15675 I 0.805
L892_g2782 Steinernema scapterisci L892_g2782 I 0.803
L889_g6799 Steinernema feltiae L889_g6799 I 0.802
CRE18699 Caenorhabditis remanei CRE18699 I 0.801
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.799
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.796
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.793
Minc14668 Meloidogyne incognita Minc14668 I 0.793
L892_g14818 Steinernema scapterisci L892_g14818 I 0.793
L889_g6797 Steinernema feltiae L889_g6797 I 0.792
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.792
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.789
L892_g10842 Steinernema scapterisci L892_g10842 I 0.789
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.784
L889_g6804 Steinernema feltiae L889_g6804 I 0.783
L889_g8187 Steinernema feltiae L889_g8187 I 0.780
L898_g19021 Steinernema monticolum L898_g19021 I 0.770
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.767
L898_g19014 Steinernema monticolum L898_g19014 I 0.765
L898_g32142 Steinernema monticolum L898_g32142 N 0.764
L898_g4012 Steinernema monticolum L898_g4012 I 0.763
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.763
L889_g6696 Steinernema feltiae L889_g6696 I 0.759
L898_g3514 Steinernema monticolum L898_g3514 I 0.758
L889_g8185 Steinernema feltiae L889_g8185 I 0.752