CBG15881 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG15881 T301549_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR

YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.863 0.514
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.791 0.486
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH

DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.756 0.514
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN

NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.756 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG15881 Nuclear receptor 29 99

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ABF2 Arabidopsis thaliana AT1G45249 D 0.000
OS08G0471950 Oryza sativa OS08G0471950 D 0.000
PK18009.1 Cannabis sativa PK18009.1 D 0.000
ABF3 Arabidopsis thaliana AT4G34000 D 0.000
ABF4 Arabidopsis thaliana AT3G19290 D 0.000
ABI5 Arabidopsis thaliana AT2G36270 D 0.000
ABF1 Arabidopsis thaliana AT1G49720 D 0.000
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.000
mgf002047m Mimulus guttatus mgf002047m I 0.000
mgf007524m Mimulus guttatus mgf007524m I 0.000
mgf014602m Mimulus guttatus mgf014602m I 0.000
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.000
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.000
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.000
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.000
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.000
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.000
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.000
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.000
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.000
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.000
TCM_007074 Theobroma cacao TCM_007074 I 0.000
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.000
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.000
Ca_06458 Cicer arietinum Ca_06458 I 0.000
Cla016272 Citrullus lanatus Cla016272 I 0.000
Cla022926 Citrullus lanatus Cla022926 I 0.000
Pm005288 Prunus mume Pm005288 I 0.000
Pm021430 Prunus mume Pm021430 I 0.000
29801.m003176 Ricinus communis 29801.m003176 I 0.000
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.000
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.000
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.000
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.000
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.000
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.000
MDP0000248567 Malus domestica MDP0000248567 I 0.000
MDP0000701734 Malus domestica MDP0000701734 I 0.000
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.000
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.000
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.000
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.000
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.000
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.000
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.000
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.000
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.000
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.000
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.000
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.000
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.000
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.000
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.000
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.000
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.000
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.000
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.000
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.000
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.000
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.000
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.000
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.000
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.000
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.000
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.000
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.000
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.000
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.000
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.000
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.000
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.000
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.000
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.000
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.000
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.000
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.000
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.000
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.000
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.000
Bo1g114840 Brassica oleracea Bo1g114840 I 0.000
Bo3g073080 Brassica oleracea Bo3g073080 I 0.000
Bo5g115300 Brassica oleracea Bo5g115300 I 0.000
Bo6g006970 Brassica oleracea Bo6g006970 I 0.000
Bo7g116570 Brassica oleracea Bo7g116570 I 0.000
Bra011485 Brassica rapa Bra011485 I 0.000
Bra018800 Brassica rapa Bra018800 I 0.000
Bra022409 Brassica rapa Bra022409 I 0.000
Bra037533 Brassica rapa Bra037533 I 0.000
Bra040260 Brassica rapa Bra040260 I 0.000
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.000
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.000
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.000
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.000
OB02G40680 Oryza brachyantha OB02G40680 I 0.000
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.000
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.000
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.000
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.000
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.000
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.000
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.000
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.000
Si013904m.g Setaria italica Si013904m.g I 0.000
Si030114m.g Setaria italica Si030114m.g I 0.000
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.000
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.000
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.000
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.000
OB09G19140 Oryza brachyantha OB09G19140 I 0.000
OBART02G33770 Oryza barthii OBART02G33770 I 0.000
OBART08G17810 Oryza barthii OBART08G17810 I 0.000
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.000
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.000
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.000
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.000
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.000
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.000
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.000
OS09G0456200 Oryza sativa OS09G0456200 I 0.000
Sb02g026570 Sorghum bicolor Sb02g026570 N 0.000
F775_07568 Aegilops tauschii F775_07568 N 0.000
Traes_5BL_DE53199D3 Triticum aestivum Traes_5BL_DE53199D3 N 0.000
GLYMA02G14880 Glycine max GLYMA02G14880 N 0.000