CBG16982 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG16982 T301557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.897 0.557
nhr-216
M00705_2.00
Caenorhabditis elegans
RRTCAGAAN

NTTCTGAYY
PBM
Narasimhan et al.(2015)
pTH10811
0.755 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG16982 Nuclear receptor 18 88

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.858
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.795
CBG04928 Caenorhabditis briggsae CBG04928 I 0.959
CBG04929 Caenorhabditis briggsae CBG04929 I 0.924
CBG09399 Caenorhabditis briggsae CBG09399 I 0.747
CBG09567 Caenorhabditis briggsae CBG09567 I 0.917
CBG15881 Caenorhabditis briggsae CBG15881 I 0.757
CBG19169 Caenorhabditis briggsae CBG19169 I 0.903
CBN00434 Caenorhabditis brenneri CBN00434 I 0.828
CBN13022 Caenorhabditis brenneri CBN13022 I 0.764
CBN13200 Caenorhabditis brenneri CBN13200 I 0.947
CRE10693 Caenorhabditis remanei CRE10693 I 0.946
CRE12950 Caenorhabditis remanei CRE12950 I 0.845
CRE13011 Caenorhabditis remanei CRE13011 I 0.891
CRE15097 Caenorhabditis remanei CRE15097 I 0.946
CRE30948 Caenorhabditis remanei CRE30948 I 0.855
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.795
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.856
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.805
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.795
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.856
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.857
L892_g2782 Steinernema scapterisci L892_g2782 I 0.876
L893_g18993 Steinernema glaseri L893_g18993 I 0.784
L893_g18997 Steinernema glaseri L893_g18997 I 0.822
L898_g21763 Steinernema monticolum L898_g21763 I 0.802
L898_g3512 Steinernema monticolum L898_g3512 I 0.786
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.807
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.765
nhr-216 Caenorhabditis elegans WBGene00020385 D 0.755
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.897
nhr-30 Caenorhabditis elegans WBGene00016091 N 0.877
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.870
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.897
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.760
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.840