CBG20699 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG20699 T301592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-70
M00695_2.00
Caenorhabditis elegans
NYTGTAGYYD

HRRCTACARN
PBM
Narasimhan et al.(2015)
pTH9174
0.984 0.871
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC

GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.841 0.671
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG20699 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BXY_1091200 Bursaphelenchus xylophilus BXY_1091200 I 0.796
BXY_1189000 Bursaphelenchus xylophilus BXY_1189000 I 0.806
CBG12152 Caenorhabditis briggsae CBG12152 I 0.864
CBG16375 Caenorhabditis briggsae CBG16375 I 0.890
CBN03440 Caenorhabditis brenneri CBN03440 I 0.869
CBN03769 Caenorhabditis brenneri CBN03769 I 0.797
CBN04619 Caenorhabditis brenneri CBN04619 I 0.860
CBN16902 Caenorhabditis brenneri CBN16902 I 0.829
CBN22974 Caenorhabditis brenneri CBN22974 I 0.789
CBN24070 Caenorhabditis brenneri CBN24070 I 0.762
CJA04414 Caenorhabditis japonica CJA04414 I 0.753
CJA07390 Caenorhabditis japonica CJA07390 I 0.753
CJA10576 Caenorhabditis japonica CJA10576 I 0.899
CRE07801 Caenorhabditis remanei CRE07801 I 0.981
CRE09011 Caenorhabditis remanei CRE09011 I 0.782
CRE17354 Caenorhabditis remanei CRE17354 I 0.765
CRE18529 Caenorhabditis remanei CRE18529 I 0.866
CRE27174 Caenorhabditis remanei CRE27174 I 0.810
CRE27659 Caenorhabditis remanei CRE27659 I 0.851
L889_g10781 Steinernema feltiae L889_g10781 I 0.758
L889_g9698 Steinernema feltiae L889_g9698 I 0.785
L889_g987 Steinernema feltiae L889_g987 I 0.785
L892_g8145 Steinernema scapterisci L892_g8145 I 0.816
L893_g4569 Steinernema glaseri L893_g4569 I 0.816
L893_g9517 Steinernema glaseri L893_g9517 I 0.754
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.840
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.828
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.788
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.871
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.887
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.774
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.984
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.841
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.766
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.757