CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG23697
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG23697
T301626_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG23697_CONSTRUCT
M01299_2.00
PBM CONSTRUCTS
NNTKTGTGTYN
NRACACAMANN
PBM
Lambert et al.(2019)
pTH11459
0.988
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG23697
Nuclear receptor
11
74
EKCSVCPEPGNGMHFGAYTCRACAAFFRRAAPRNSSKKCKNHLKFARKCRFCRLQKCYEAGMNS
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG23697_CONSTRUCT
PBM CONSTRUCTS
CBG23697_CONSTRUCT
D
0.988
CBG22888
Caenorhabditis briggsae
CBG22888
I
0.847
CRE27862
Caenorhabditis remanei
CRE27862
I
0.775
CBG01251
Caenorhabditis briggsae
CBG01251
I
0.771
CRE11317
Caenorhabditis remanei
CRE11317
I
0.761
CBG22881
Caenorhabditis briggsae
CBG22881
I
0.756