CBN08077 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN08077 T301717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-46
M00692_2.00
Caenorhabditis elegans
NNNDWNHRN

NYDNWHNNN
PBM
Narasimhan et al.(2015)
pTH9924
0.991 0.943
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN08077 Nuclear receptor 96 166

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_22589 Ancylostoma caninum ANCCAN_22589 I 0.932
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 I 0.779
CBG19870 Caenorhabditis briggsae CBG19870 I 0.993
CBN16259 Caenorhabditis brenneri CBN16259 I 0.993
CJA19491 Caenorhabditis japonica CJA19491 I 0.992
CRE28659 Caenorhabditis remanei CRE28659 I 0.992
CRE30546 Caenorhabditis remanei CRE30546 I 0.992
L596_g14937 Steinernema carpocapsae L596_g14937 I 0.917
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.752
L889_g304 Steinernema feltiae L889_g304 I 0.917
L892_g3438 Steinernema scapterisci L892_g3438 I 0.745
L892_g3686 Steinernema scapterisci L892_g3686 I 0.917
L893_g13425 Steinernema glaseri L893_g13425 I 0.921
L898_g30036 Steinernema monticolum L898_g30036 I 0.917
L898_g9613 Steinernema monticolum L898_g9613 I 0.745
Minc11986 Meloidogyne incognita Minc11986 I 0.779
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.808
nhr-46 Caenorhabditis elegans WBGene00003636 D 0.991
PPA17263 Pristionchus pacificus PPA17263 I 0.917
scaffold19-EXSNAP2012.26 Pristionchus exspectatus scaffold19-EXSNAP2012.26 I 0.898
scaffold303-EXSNAP2012.4 Pristionchus exspectatus scaffold303-EXSNAP2012.4 I 0.925
scaffold731-EXSNAP2012.1 Pristionchus exspectatus scaffold731-EXSNAP2012.1 I 0.917