CBN08904 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN08904 T301721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.981 0.886
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.981 0.886
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.911 0.686
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN08904 Nuclear receptor 50 119

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
daf-12 Caenorhabditis elegans WBGene00000908 D 0.981
Hr96 Drosophila melanogaster FBgn0015240 D 0.911
ACOM033140 Anopheles coluzzii ACOM033140 I 0.898
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.848
ACAC_0000565201 Angiostrongylus cantonensis ACAC_0000565201 I 0.945
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.981
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.981
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I 0.973
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.981
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.980
ASU_07898 Ascaris suum ASU_07898 I 0.980
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.980
BXY_1432000 Bursaphelenchus xylophilus BXY_1432000 I 0.752
MDOA002084 Musca domestica MDOA002084 I 0.902
ASTEI03690 Anopheles stephensi ASTEI03690 I 0.898
ACUA008166 Anopheles culicifacies ACUA008166 I 0.898
ADIR005534 Anopheles dirus ADIR005534 I 0.878
AEPI000232 Anopheles epiroticus AEPI000232 I 0.898
AFAF019254 Anopheles farauti AFAF019254 I 0.882
AFUN010189 Anopheles funestus AFUN010189 I 0.898
AMAM022585 Anopheles maculatus AMAM022585 I 0.898
AMEC016766 Anopheles melas AMEC016766 I 0.898
AMEM008752 Anopheles merus AMEM008752 I 0.898
AMIN004130 Anopheles minimus AMIN004130 I 0.898
AQUA008824 Anopheles quadriannulatus AQUA008824 I 0.898
ASIS011648 Anopheles sinensis ASIS011648 I 0.896
CGOC_0000057501 Cylicostephanus goldi CGOC_0000057501 I 0.865
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.980
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.978
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I 0.971
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.981
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.980
SPAL_0000150000 Strongyloides papillosus SPAL_0000150000 I 0.834
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.978
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.978
SSTP_0001272200 Strongyloides stercoralis SSTP_0001272200 I 0.834
SVE_0958300 Strongyloides venezuelensis SVE_0958300 I 0.834
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.978
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.980
PTRK_0001132000 Parastrongyloides trichosuri PTRK_0001132000 I 0.834
OFLC_0000598101 Onchocerca flexuosa OFLC_0000598101 I 0.930
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.980
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.980
L889_g10853 Steinernema feltiae L889_g10853 I 0.980
L892_g18386 Steinernema scapterisci L892_g18386 I 0.976
L893_g16225 Steinernema glaseri L893_g16225 I 0.977
L898_g10498 Steinernema monticolum L898_g10498 I 0.980
MhA1_Contig1158.frz3.gene18 Meloidogyne hapla MhA1_Contig1158.frz3.gene18 I 0.747
nAv.1.0.1.g08097 Acanthocheilonema viteae nAv.1.0.1.g08097 I 0.749
NBR_0000856001 Nippostrongylus brasiliensis NBR_0000856001 I 0.838
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.980
nLs.2.1.2.g07694 Litomosoides sigmodontis nLs.2.1.2.g07694 I 0.749
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.981
AATE006049 Anopheles atroparvus AATE006049 I 0.896
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I 0.890
vdr-a Ciona intestinalis ENSCING00000020740 I 0.794
Hr96 Drosophila grimshawi FBgn0020174 I 0.902
GA11197 Drosophila pseudoobscura FBgn0071252 I 0.902
GF16320 Drosophila ananassae FBgn0093341 I 0.911
GG11347 Drosophila erecta FBgn0103647 I 0.911
GI22223 Drosophila mojavensis FBgn0144951 I 0.902
GM17786 Drosophila sechellia FBgn0172693 I 0.911
GD21158 Drosophila simulans FBgn0192609 I 0.911
GJ24344 Drosophila virilis FBgn0211424 I 0.902
GK14276 Drosophila willistoni FBgn0216282 I 0.897
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.879
CRE07237 Caenorhabditis remanei CRE07237 I 0.981
CPIJ016038 Culex quinquefasciatus CPIJ016038 I 0.890
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.980
HR96 Aedes aegypti AAEL007202 I 0.890
ACEP16468 Atta cephalotes ACEP16468 I 0.825
ADAC003041 Anopheles darlingi ADAC003041 I 0.899
AGAP004224 Anopheles gambiae AGAP004224 I 0.898
BGIBMGA010782 Bombyx mori BGIBMGA010782 I 0.852
CBG04512 Caenorhabditis briggsae CBG04512 I 0.981
CBN26095 Caenorhabditis brenneri CBN26095 I 0.835
CBN31767 Caenorhabditis brenneri CBN31767 I 0.981
CJA11532 Caenorhabditis japonica CJA11532 I 0.981
GE23543 Drosophila yakuba FBgn0240719 I 0.911
GB52904 Apis mellifera GB52904 I 0.861
HMEL016865 Heliconius melpomene HMEL016865 I 0.852
YQE_04331 Dendroctonus ponderosae YQE_04331 I 0.868
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I 0.856
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I 0.861
CLEC000589 Cimex lectularius CLEC000589 I 0.831
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.849
LCUP002913 Lucilia cuprina LCUP002913 I 0.902
LDEC005794 Leptinotarsa decemlineata LDEC005794 I 0.895
Minc13296 Meloidogyne incognita Minc13296 I 0.747
Minc18589 Meloidogyne incognita Minc18589 I 0.747
AALB008395 Anopheles albimanus AALB008395 I 0.899
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.980
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.795
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.811
ISCW009328 Ixodes scapularis ISCW009328 I 0.799
KGM_05575 Danaus plexippus KGM_05575 I 0.852
L798_15710 Zootermopsis nevadensis L798_15710 I 0.883
LOAG_10538 Loa loa LOAG_10538 I 0.980
MCINX005291 Melitaea cinxia MCINX005291 I 0.759
NV10187 Nasonia vitripennis NV10187 I 0.861
PHUM460970 Pediculus humanus PHUM460970 I 0.825
RPRC001794 Rhodnius prolixus RPRC001794 I 0.876
SMAR007355 Strigamia maritima SMAR007355 I 0.848
TC010645 Tribolium castaneum TC010645 I 0.862
AARA011580 Anopheles arabiensis AARA011580 I 0.898