TF Information

CBN11572 *(Caenorhabditis brenneri)* Nuclear receptor
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00105 (zf-C4)	IPR001628	CBN11572	T301741_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
nhr-49 M02413_2.00	Caenorhabditis elegans	NNNNWNHAN	NTDNWNNNN	PBM Weirauch et al.(2014) pTH5891	0.931	0.571
nhr-1 M00686_2.00	Caenorhabditis elegans	ARTGATCA	TGATCAYT	PBM Narasimhan et al.(2015) pTH9322	0.882	0.471
Hnf4 M03935_2.00	Drosophila melanogaster	RGGKCAAAGGTCA	TGACCTTTGMCCY	SELEX Nitta et al.(2015) Hnf4_1	0.746	0.557
Hnf4 M03936_2.00	Drosophila melanogaster	RGGKCAAAGTYCA	TGRACTTTGMCCY	SELEX Nitta et al.(2015) Hnf4_2	0.746	0.557
Hnf4 M03937_2.00	Drosophila melanogaster	RGTVCAAAGKTCR	YGAMCTTTGBACY	SELEX Nitta et al.(2015) Hnf4_3	0.746	0.557
Hnf4 M03938_2.00	Drosophila melanogaster	RTGRACTTTGGACY	RGTCCAAAGTYCAY	SELEX Nitta et al.(2015) Hnf4_4	0.746	0.557
Hnf4 M06428_2.00	Drosophila melanogaster	DKNKWSSNGGGGTCA	TGACCCCNSSWMNMH	B1H Zhu et al.(2011) Hnf4_SANGER_10_FBgn0004914	0.746	0.557
Hnf4 M06429_2.00	Drosophila melanogaster	GGGGTCAH	DTGACCCC	B1H Zhu et al.(2011) Hnf4_SANGER_5_FBgn0004914	0.746	0.557
For this family, TFs with SR scores > 0.745* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
CBN11572	Nuclear receptor	19	88	SICHICSDVATGRHYGAIACNGCKGFFRRTVRRSYEYHCRFESKCEIDKHNRAVCRYCRFMKCISSGMRD

Links
Other Nuclear receptor family TFs
Other *Caenorhabditis brenneri* TFs

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245 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action