CBN12210 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN12210 T301743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.772 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN12210 Nuclear receptor 1 70

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALNC14_130970 Albugo laibachii ALNC14_130970 N 0.000
Physo128740 Phytophthora sojae Physo128740 N 0.000
Phyra72977 Phytophthora ramorum Phyra72977 N 0.000
maker-pve_contig_36-snap-gene-0.51 Pythium vexans maker-pve_contig_36-snap-gene-0.51 N 0.000
maker-pir_contig_3-snap-gene-0.64 Pythium irregulare maker-pir_contig_3-snap-gene-0.64 N 0.000
maker-pag1_scaffold_289-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_289-fgenesh-gene-0.3 N 0.000
HpaG809354 Hyaloperonospora arabidopsidis HpaG809354 N 0.000
fgenesh_scip_prom.28083.9227 Phytophthora lateralis fgenesh_scip_prom.28083.9227 N 0.000
fgenesh-piw_contig_4737-abinit-gene-0.5 Pythium iwayamai fgenesh-piw_contig_4737-abinit-gene-0.5 N 0.000
F443_05481 Phytophthora parasitica F443_05481 N 0.000
snap_masked-par_contig_674-abinit-gene-0.13 Pythium arrhenomanes snap_masked-par_contig_674-abinit-gene-0.13 N 0.000