CBN19233 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN19233 T301800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN

NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.993 0.943
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN19233 Nuclear receptor 53 122

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.993
L889_g29246 Steinernema feltiae L889_g29246 I 0.773
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.984
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.984
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.827
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.880
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.992
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.889
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.880
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.992
NECAME_04545 Necator americanus NECAME_04545 I 0.993
NECAME_05125 Necator americanus NECAME_05125 I 0.889
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.992
L898_g4801 Steinernema monticolum L898_g4801 I 0.889
L898_g24498 Steinernema monticolum L898_g24498 I 0.832
L898_g23965 Steinernema monticolum L898_g23965 I 0.808
L889_g5777 Steinernema feltiae L889_g5777 I 0.848
L889_g6303 Steinernema feltiae L889_g6303 I 0.812
L889_g8361 Steinernema feltiae L889_g8361 I 0.767
L892_g19201 Steinernema scapterisci L892_g19201 I 0.809
L892_g21738 Steinernema scapterisci L892_g21738 I 0.801
L892_g650 Steinernema scapterisci L892_g650 I 0.991
L893_g27196 Steinernema glaseri L893_g27196 I 0.812
L893_g29388 Steinernema glaseri L893_g29388 I 0.832
L893_g29555 Steinernema glaseri L893_g29555 I 0.991
L893_g6878 Steinernema glaseri L893_g6878 I 0.889
L898_g10316 Steinernema monticolum L898_g10316 I 0.766
L898_g14928 Steinernema monticolum L898_g14928 I 0.766
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.880
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.880
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.992
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.889
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.855
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.889
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.855
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.832
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.832
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.855
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.889
SVUK_0001012101 Strongylus vulgaris SVUK_0001012101 I 0.930
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.992
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.880
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.992
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.832
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.885
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.993
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.889
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.992
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.880
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.757
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.753
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.855
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.889
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.872
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.992
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.779
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.984
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.993
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.992
CRE15289 Caenorhabditis remanei CRE15289 I 0.993
LOAG_05485 Loa loa LOAG_05485 I 0.880
LOAG_18352 Loa loa LOAG_18352 I 0.992
PPA20304 Pristionchus pacificus PPA20304 I 0.986
PPA21285 Pristionchus pacificus PPA21285 I 0.872
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.878
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.992
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.880
Minc01725 Meloidogyne incognita Minc01725 I 0.984
Minc13525 Meloidogyne incognita Minc13525 I 0.984
Minc15420 Meloidogyne incognita Minc15420 I 0.885
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.891
CRE06667 Caenorhabditis remanei CRE06667 I 0.878
CRE06661 Caenorhabditis remanei CRE06661 I 0.748
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.880
Bm12053 Brugia malayi Bm12053 I 0.880
Bm14724 Brugia malayi Bm14724 I 0.992
Bm4894 Brugia malayi Bm4894 I 0.880
CBG07552 Caenorhabditis briggsae CBG07552 I 0.993
CBG19594 Caenorhabditis briggsae CBG19594 I 0.748
CBG19604 Caenorhabditis briggsae CBG19604 I 0.880
CBN07936 Caenorhabditis brenneri CBN07936 I 0.878
CBN20828 Caenorhabditis brenneri CBN20828 I 0.878
CBN31048 Caenorhabditis brenneri CBN31048 I 0.748
CJA04720 Caenorhabditis japonica CJA04720 I 0.880
CJA13646 Caenorhabditis japonica CJA13646 I 0.992
ACOC_0000732601 Angiostrongylus costaricensis ACOC_0000732601 I 0.971
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.889
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.993
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.984
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.880
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.889
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.759
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.889
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.993
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.832
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.766
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.991
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.891
L596_g27130 Steinernema carpocapsae L596_g27130 I 0.792
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.812
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.827
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.879
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.760
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.989
ASU_10946 Ascaris suum ASU_10946 I 0.992
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.992
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.880
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.782
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.985
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.826
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.827
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.987
DME_0000480501 Dracunculus medinensis DME_0000480501 I 0.890
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.748
L889_g29204 Steinernema feltiae L889_g29204 I 0.889