CBN22518 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN22518 T301824_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW

WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.980 0.900
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM

KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.980 0.886
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN

NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.968 0.843
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD

HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.968 0.843
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA

TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.968 0.843
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA

TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.968 0.829
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN

NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.963 0.829
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN

NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.957 0.829
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN

NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.950 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN22518 Nuclear receptor 100 170

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB10449.1 Alternaria brassicicola AB10449.1 N 0.000
COCC4DRAFT_55968 Bipolaris maydis COCC4DRAFT_55968 N 0.000
COCCADRAFT_7385 Bipolaris zeicola COCCADRAFT_7385 N 0.000
COCMIDRAFT_3190 Bipolaris oryzae COCMIDRAFT_3190 N 0.000
COCSADRAFT_169871 Bipolaris sorokiniana COCSADRAFT_169871 N 0.000
estExt_fgenesh1_pg.C_40091 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40091 N 0.000
PTRG_07153 Pyrenophora triticirepentis PTRG_07153 N 0.000
PTT_11957 Pyrenophora teres PTT_11957 N 0.000
SETTUDRAFT_177715 Setosphaeria turcica SETTUDRAFT_177715 N 0.000