CGI_10027671 (Crassostrea gigas)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CGI_10027671 T301918_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN

NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.767 0.657
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN

NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.767 0.657
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN

NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.767 0.657
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA

TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.767 0.657
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA

TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.767 0.657
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW

WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.767 0.657
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA

TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.767 0.657
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN

NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.767 0.657
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN

NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.767 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC31559 Nuclear receptor 141 210

Links

Other Nuclear receptor family TFs
Other Crassostrea gigas TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYCN Homo sapiens ENSG00000134323 D 0.000
Mycn Mus musculus ENSMUSG00000037169 D 0.000
MYCN Taeniopygia guttata ENSTGUG00000013104 I 0.000
ENSSTOG00000021587 Ictidomys tridecemlineatus ENSSTOG00000021587 I 0.000
ENSSTOG00000012252 Ictidomys tridecemlineatus ENSSTOG00000012252 I 0.000
MYCN Sus scrofa ENSSSCG00000008618 I 0.000
Mycn Rattus norvegicus ENSRNOG00000051372 I 0.000
MYCN Pteropus vampyrus ENSPVAG00000010355 I 0.000
MYCN Pan troglodytes ENSPTRG00000011672 I 0.000
ENSPSIG00000012289 Pelodiscus sinensis ENSPSIG00000012289 I 0.000
ENSPPYG00000012635 Pongo abelii ENSPPYG00000012635 I 0.000
ENSPANG00000019058 Papio anubis ENSPANG00000019058 I 0.000
MYCN Ochotona princeps ENSOPRG00000004369 I 0.000
Tal_R000146 Tyto alba Tal_R000146 I 0.000
MYCN Tursiops truncatus ENSTTRG00000005135 I 0.000
ENSVPAG00000007723 Vicugna pacos ENSVPAG00000007723 I 0.000
Pvit_07093 Pogona vitticeps Pvit_07093 I 0.000
Ogr12112 Ophisaurus gracilis Ogr12112 I 0.000
Myotis_brandtii_MYCN_10020172 Myotis brandtii Myotis_brandtii_MYCN_10020172 I 0.000
Gfo_R015246 Geospiza fortis Gfo_R015246 I 0.000
ENSP00000281043-D1 Bos grunniens ENSP00000281043-D1 I 0.000
ENSMMUP00000024750 Macaca fascicularis ENSMMUP00000024750 I 0.000
Cmyd_10010643 Chelonia mydas Cmyd_10010643 I 0.000
Brh_R011889 Buceros rhinoceros Brh_R011889 I 0.000
Alligator_sinensis_CCG003524.1 Alligator sinensis Alligator_sinensis_CCG003524.1 I 0.000
Afo_R015728 Aptenodytes forsteri Afo_R015728 I 0.000
Aan_R015370 Calypte anna Aan_R015370 I 0.000
MYCN Otolemur garnettii ENSOGAG00000010927 I 0.000
ENSOCUG00000026053 Oryctolagus cuniculus ENSOCUG00000026053 I 0.000
ENSOARG00000016462 Ovis aries ENSOARG00000016462 I 0.000
ENSFALG00000008694 Ficedula albicollis ENSFALG00000008694 I 0.000
ENSETEG00000007657 Echinops telfairi ENSETEG00000007657 I 0.000
ENSECAG00000002896 Equus caballus ENSECAG00000002896 I 0.000
Mycn Dipodomys ordii ENSDORG00000009906 I 0.000
MYCN Dasypus novemcinctus ENSDNOG00000047342 I 0.000
ENSCSAG00000007889 Chlorocebus sabaeus ENSCSAG00000007889 I 0.000
MYCN Cavia porcellus ENSCPOG00000020263 I 0.000
ENSCAFG00000003715 Canis familiaris ENSCAFG00000003715 I 0.000
ENSBTAG00000023372 Bos taurus ENSBTAG00000023372 I 0.000
ENSAPLG00000009825 Anas platyrhynchos ENSAPLG00000009825 I 0.000
ENSAMEG00000001062 Ailuropoda melanoleuca ENSAMEG00000001062 I 0.000
ENSFCAG00000022893 Felis catus ENSFCAG00000022893 I 0.000
MYCN Gallus gallus ENSGALG00000016462 I 0.000
MYCN Ornithorhynchus anatinus ENSOANG00000012832 I 0.000
ENSNLEG00000014496 Nomascus leucogenys ENSNLEG00000014496 I 0.000
ENSMPUG00000013620 Mustela putorius furo ENSMPUG00000013620 I 0.000
ENSMMUG00000018805 Macaca mulatta ENSMMUG00000018805 I 0.000
ENSMLUG00000026821 Myotis lucifugus ENSMLUG00000026821 I 0.000
MYCN Microcebus murinus ENSMICG00000013903 I 0.000
ENSMGAG00000015965 Meleagris gallopavo ENSMGAG00000015965 I 0.000
ENSMEUG00000006154 Macropus eugenii ENSMEUG00000006154 I 0.000
MYCN Loxodonta africana ENSLAFG00000015181 I 0.000
ENSLACG00000008338 Latimeria chalumnae ENSLACG00000008338 I 0.000
MYCN Gorilla gorilla ENSGGOG00000005130 I 0.000
MYCN Anolis carolinensis ENSACAG00000011351 I 0.000