CJA15590 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA15590 T301977_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Rora
M00819_2.00
Mus musculus
NNRGGTCA

TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.952 0.586
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA

TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.952 0.586
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA

TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.952 0.586
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA

TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.952 0.586
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN

NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.952 0.586
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.952 0.586
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR

YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.952 0.586
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH

DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.952 0.586
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN

NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.952 0.586
RORA
M11092_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.952 0.586
RORA
M11093_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.952 0.586
Rorb
M00820_2.00
Mus musculus
NRGGTCANN

NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.950 0.614
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.950 0.614
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN

NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.950 0.614
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.950 0.614
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN

NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.950 0.614
RORB
M11187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.950 0.614
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN

NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.950 0.614
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN

NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.950 0.614
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.950 0.586
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA

TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.950 0.586
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM

KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.944 0.571
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN

NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.944 0.571
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA

TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.944 0.571
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA

TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.944 0.571
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA

TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.944 0.571
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN

NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.944 0.571
RORC
M02405_2.00
Tetraodon nigroviridis
NGAGGTCANN

NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6612
0.934 0.586
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR

YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.930 0.600
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.930 0.600
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA

TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.930 0.600
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW

WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.930 0.600
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA

TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.930 0.600
RARG
M02397_2.00
Homo sapiens
VGGTCANN

NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.928 0.586
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN

NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.928 0.586
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD

HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.928 0.586
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA

TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.928 0.586
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA

TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.928 0.586
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY

RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.928 0.586
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA

TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.928 0.586
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA

TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.928 0.586
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH

DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.928 0.586
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA

TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.928 0.586
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA

TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.928 0.586
RARG
M05653_2.00
Homo sapiens
NRGGTCANV

BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.928 0.586
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN

NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.928 0.586
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH

DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.928 0.586
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA

TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.928 0.586
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.928 0.586
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV

BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.928 0.586
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA

TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.928 0.586
RARG
M11167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.928 0.586
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV

BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.928 0.586
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN

NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.928 0.586
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY

RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.928 0.586
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.926 0.586
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH

DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.926 0.586
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN

NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.926 0.586
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.926 0.586
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.926 0.586
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB

VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.926 0.586
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN

NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.926 0.586
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.926 0.586
Rara
M00185_2.00
Mus musculus
NRGGTCAN

NTGACCYN
PBM
Badis et al.(2009)
Rara_1051
0.923 0.586
RARA
M03369_2.00
Homo sapiens
RRAGGTCAWBWRRGGTCA

TGACCYYWVWTGACCTYY
SELEX
Jolma et al.(2013)
RARA_1
0.923 0.586
RARA
M03370_2.00
Homo sapiens
RAGGTCAAAAGGTCAWKB

VMWTGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
RARA_2
0.923 0.586
RARA
M03371_2.00
Homo sapiens
AGGTCAHNYWRAGGTCA

TGACCTYWRNDTGACCT
SELEX
Jolma et al.(2013)
RARA_3
0.923 0.586
RARA
M03372_2.00
Homo sapiens
ARGGTCAAAAGGTCA

TGACCTTTTGACCYT
SELEX
Jolma et al.(2013)
RARA_4
0.923 0.586
RARA
M03373_2.00
Homo sapiens
WRRGGTCAHSHRRGGTCA

TGACCYYDSDTGACCYYW
SELEX
Jolma et al.(2013)
RARA_5
0.923 0.586
RARA
M03374_2.00
Homo sapiens
AGGTCAWNNARAGGTCA

TGACCTYTNNWTGACCT
SELEX
Jolma et al.(2013)
RARA_6
0.923 0.586
Rara
M03432_2.00
Mus musculus
AAAGGTCAHBVRAGGTCA

TGACCTYBVDTGACCTTT
SELEX
Jolma et al.(2013)
Rara_1
0.923 0.586
Rara
M03433_2.00
Mus musculus
AGGTCAHNHAAAGGTCA

TGACCTTTDNDTGACCT
SELEX
Jolma et al.(2013)
Rara_2
0.923 0.586
Rara
M03434_2.00
Mus musculus
RAGGTCAAAAGGTCA

TGACCTTTTGACCTY
SELEX
Jolma et al.(2013)
Rara_3
0.923 0.586
RARA
M05607_2.00
Homo sapiens
NVGGKCANNRGGKCAN

NTGMCCYNNTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
0.923 0.586
RARA
M05608_2.00
Homo sapiens
NVGGKCAYGNCCBN

NVGGNCRTGMCCBN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
0.923 0.586
RARA
M05609_2.00
Homo sapiens
NRRGGTCANV

BNTGACCYYN
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
0.923 0.586
RARA
M05878_2.00
Homo sapiens
RAGGTCA

TGACCTY
SMiLE-seq
Isakova et al.(2017)
RARa
0.923 0.586
RARA
M09277_2.00
Homo sapiens
RRRDVDBSNDRAGKTCARGG

CCYTGAMCTYHNSVHBHYYY
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
0.923 0.586
Rara
M09329_2.00
Mus musculus
RGRTCRDRAGKTCAAGGTCA

TGACCTTGAMCTYHYGAYCY
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
0.923 0.586
RARA
M11137_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B1_Q6
0.923 0.586
RARA
M05610_2.00
Homo sapiens
DRGGKCRNDRGGTCRN

NYGACCYHNYGMCCYH
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
0.923 0.586
RARA
M05611_2.00
Homo sapiens
NVGGTCAYGMCCYN

NRGGKCRTGACCBN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
0.923 0.586
RARA
M05612_2.00
Homo sapiens
NRAGGTCANN

NNTGACCTYN
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
0.923 0.586
Rarb
M02401_2.00
Mus musculus
NRRGGTCAHN

NDTGACCYYN
PBM
Weirauch et al.(2014)
pTH2804
0.922 0.571
RARB
M03355_2.00
Homo sapiens
AAAGGTCAARAGGTCA

TGACCTYTTGACCTTT
SELEX
Jolma et al.(2013)
RARB_1
0.922 0.571
Rarb
M03423_2.00
Mus musculus
WAAGGTCAAAAGGTCA

TGACCTTTTGACCTTW
SELEX
Jolma et al.(2013)
Rarb_1
0.922 0.571
Rarb
M03424_2.00
Mus musculus
RRAGGTCANBWRAGGTCA

TGACCTYWVNTGACCTYY
SELEX
Jolma et al.(2013)
Rarb_2
0.922 0.571
Rarb
M03425_2.00
Mus musculus
AGGTCAHVBWRAGGTCA

TGACCTYWVBDTGACCT
SELEX
Jolma et al.(2013)
Rarb_3
0.922 0.571
RARB
M05563_2.00
Homo sapiens
NHAAGGTCAN

NTGACCTTDN
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
0.922 0.571
RARB
M05564_2.00
Homo sapiens
RRGGTCAARRGGTCAN

NTGACCYYTTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
0.922 0.571
RARB
M05565_2.00
Homo sapiens
DAGGTCAYGACCYY

RRGGTCRTGACCTH
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
0.922 0.571
RARB
M11094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR1B2_Q6
0.922 0.571
RARB
M05566_2.00
Homo sapiens
NHRAGGTCAH

DTGACCTYDN
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
0.922 0.571
RARB
M05567_2.00
Homo sapiens
RRGGTCAHRRGGTCAN

NTGACCYYDTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
0.922 0.571
RARB
M05568_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
0.922 0.571
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.920 0.571
CBG17178
M02392_2.00
Caenorhabditis briggsae
RAGGTCAH

DTGACCTY
PBM
Weirauch et al.(2014)
pTH6634
0.914 0.557
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR

YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.913 0.557
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA

TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.913 0.557
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.913 0.557
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA

TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.913 0.557
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.913 0.557
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY

RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.913 0.557
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN

NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.913 0.557
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY

RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.913 0.557
NR2F6
M11153_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.913 0.557
NR2F6
M11154_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.913 0.557
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.913 0.557
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.913 0.557
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN

NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.913 0.557
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN

NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.913 0.557
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN

NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.912 0.586
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN

NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.912 0.586
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.912 0.586
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN

NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.912 0.586
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN

NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.912 0.586
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG

CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.912 0.586
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.912 0.586
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY

RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.912 0.586
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.912 0.586
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY

RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.912 0.586
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN

NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.912 0.586
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA

TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.912 0.586
NR2F1
M11172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.912 0.586
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.912 0.586
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH

DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.912 0.586
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.912 0.586
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY

RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.912 0.586
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN

NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.909 0.586
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN

NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.909 0.586
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA

TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.909 0.586
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB

VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.909 0.586
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN

NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.909 0.586
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD

HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.909 0.586
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA

TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.909 0.586
NR2F2
M11181_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.909 0.586
Q969A9_BOMMO
M02410_2.00
Bombyx mori
VRGGTCDN

NHGACCYB
PBM
Weirauch et al.(2014)
pTH5516
0.908 0.586
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA

TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.908 0.557
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA

TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.907 0.571
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN

NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.904 0.529
nr1h5.S
M11194_2.00
Xenopus laevis Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRIR1_Q6
0.899 0.529
NR2C2
M03407_2.00
Homo sapiens
VRGGTCAAAGGTCA

TGACCTTTGACCYB
SELEX
Jolma et al.(2013)
NR2C2_1
0.897 0.571
NR2C2
M05669_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
0.897 0.571
NR2C2
M08156_2.00
Homo sapiens
NVRGGTCARAGGKCA

TGMCCTYTGACCYBN
ChIP-seq
Mathelier et al.(2014)
MA0504.1
0.897 0.571
NR2C2
M07990_2.00
Homo sapiens
WBYRCTTCCGGGKYV

BRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
0.897 0.571
NR2C2
M07991_2.00
Homo sapiens
DWBYRCTTCCGGGKY

RMCCCGGAAGYRVWH
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
0.897 0.571
NR2C2
M07992_2.00
Homo sapiens
WBYRCTTCCGGGKYR

YRMCCCGGAAGYRVW
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
0.897 0.571
NR2C2
M08221_2.00
Homo sapiens
DWBYDCTTCCGGGKY

RMCCCGGAAGHRVWH
ChIP-seq
Contrino et al.(2012)
Mv97
0.897 0.571
NR2C2
M08222_2.00
Homo sapiens
TCARAGGTCA

TGACCTYTGA
ChIP-seq
Contrino et al.(2012)
Mv98
0.897 0.571
NR2C2
M09292_2.00
Homo sapiens
RBTYMVRGGTCR

YGACCYBKRAVY
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
0.897 0.571
NR2C2
M09611_2.00
Homo sapiens
RRGGTCARAGGTCA

TGACCTYTGACCYY
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
0.897 0.571
NR2C2
M11173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_03
0.897 0.571
NR2C2
M11174_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR2C2_04
0.897 0.571
NR2C2
M11175_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_01
0.897 0.571
NR2C2
M11176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_03
0.897 0.571
NR2C2
M11177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2_01
0.897 0.571
NR2C2
M11178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q2
0.897 0.571
NR2C2
M11179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TR4_Q3
0.897 0.571
NR2C2
M05670_2.00
Homo sapiens
NRGGTCRN

NYGACCYN
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
0.897 0.571
Nr2c2
M09303_2.00
Mus musculus
RRGKSARAGGKCA

TGMCCTYTSMCYY
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
0.897 0.557
Eip75B
M03928_2.00
Drosophila melanogaster
MWVTAGGTCANN

NNTGACCTABWK
SELEX
Nitta et al.(2015)
Eip75B_1
0.891 0.600
Eip75B
M03929_2.00
Drosophila melanogaster
AWNTRGGTCANTRGGTCA

TGACCYANTGACCYANWT
SELEX
Nitta et al.(2015)
Eip75B_2
0.891 0.600
Eip75B
M06416_2.00
Drosophila melanogaster
KWWNTRGGTCA

TGACCYANWWM
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
0.891 0.600
Hr4
M06435_2.00
Drosophila melanogaster
AAGGTCA

TGACCTT
B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546
0.882 0.586
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.876 0.543
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA

TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.876 0.543
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.876 0.543
usp
M03934_2.00
Drosophila melanogaster
ARRGGTCAAAGGTCA

TGACCTTTGACCYYT
SELEX
Nitta et al.(2015)
usp_1
0.873 0.557
usp
M06426_2.00
Drosophila melanogaster
HRRGGTCAH

DTGACCYYD
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
0.873 0.557
usp
M02709_2.00
Drosophila melanogaster
GGGGTCACSN

NSGTGACCCC
SELEX
Mathelier et al.(2014)
MA0016.1
0.873 0.557
usp
M09689_2.00
Drosophila melanogaster
KRGGTCACG

CGTGACCYM
Misc
Kulakovskiy et al.(2009)
usp
0.873 0.557
usp
M11191_2.00
Drosophila melanogaster
GRGGTCAYS

SRTGACCYC
Transfac
Matys et al.(2006)
I$CF1_01
0.873 0.557
usp
M11192_2.00
Drosophila melanogaster
GGGGTCAYS

SRTGACCCC
Transfac
Matys et al.(2006)
I$CF1_02
0.873 0.557
Rxrg
M02400_2.00
Mus musculus
VRGGTCAN

NTGACCYB
PBM
Weirauch et al.(2014)
pTH2880
0.867 0.543
RXRG
M03375_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRG_1
0.867 0.543
RXRG
M03376_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRG_2
0.867 0.543
RXRG
M03377_2.00
Homo sapiens
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
RXRG_3
0.867 0.543
RXRG
M03378_2.00
Homo sapiens
NRGGTCATGACCYC

GRGGTCATGACCYN
SELEX
Jolma et al.(2013)
RXRG_4
0.867 0.543
RXRG
M02746_2.00
Homo sapiens
GGTCAAAGGTCA

TGACCTTTGACC
SELEX
Jolma et al.(2010)
RXRG_dimer
0.867 0.543
RXRG
M05615_2.00
Homo sapiens
VRGGTCAAAGGTCAN

NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
0.867 0.543
RXRG
M05616_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
0.867 0.543
RXRG
M05879_2.00
Homo sapiens
RGGTBAARGGTBRND

HNYVACCYTTVACCY
SMiLE-seq
Isakova et al.(2017)
RXRg
0.867 0.543
RXRG
M09280_2.00
Homo sapiens
NGTCAAAGGTCAH

DTGACCTTTGACN
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
0.867 0.543
Rxrg
M09305_2.00
Mus musculus
VDDVDNSVNRAGKTCAAGGYCA

TGRCCTTGAMCTYNBSNHBHHB
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
0.867 0.543
RXRG
M05617_2.00
Homo sapiens
DRGGTBAARGGTBRN

NYVACCYTTVACCYH
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
0.867 0.543
RXRG
M05618_2.00
Homo sapiens
VRGGTCAYGACCYB

VRGGTCRTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
0.867 0.543
NR1H4
M00368_2.00
Homo sapiens
NVRGGTCANN

NNTGACCYBN
PBM
Barrera et al.(2016)
NR1H4_REF
0.866 0.514
NR1H4
M05876_2.00
Homo sapiens
DRGKTCAHHKD

HMDDTGAMCYH
SMiLE-seq
Isakova et al.(2017)
NR1H4
0.866 0.514
NR1H4
M08152_2.00
Homo sapiens
NNGGTCATTNN

NNAATGACCNN
ChIP-seq
Mathelier et al.(2014)
MA1110.1
0.866 0.514
NR1H4
M09263_2.00
Homo sapiens
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B
0.866 0.514
Nr1h4
M09332_2.00
Mus musculus
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A
0.866 0.514
Nr1h4
M09618_2.00
Mus musculus
NRGGBCANTGVCCY

RGGBCANTGVCCYN
Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al.
0.866 0.514
NR1H4
M11086_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q2
0.866 0.514
NR1H4
M11087_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q3
0.866 0.514
NR1H4
M11088_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q5
0.866 0.514
NR1H4
M11089_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRRXR_Q5
0.866 0.514
NR1H4
M00367_2.00
Homo sapiens
NNNTWTTATDHNN

NNDHATAAWANNN
PBM
Barrera et al.(2016)
NR1H4_C144R
0.866 0.500
O77476_BRUPA
M02422_2.00
Brugia pahangi
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6019
0.863 0.529
Rxra
M00181_2.00
Mus musculus
NRRGGTCANN

NNTGACCYYN
PBM
Badis et al.(2009)
Rxra_1035
0.860 0.557
RXRA
M03408_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_1
0.860 0.557
RXRA
M03409_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_2
0.860 0.557
RXRA
M03410_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_3
0.860 0.557
RXRA
M03411_2.00
Homo sapiens
RRGGTCATGACCYY

RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_4
0.860 0.557
Rxra
M03421_2.00
Mus musculus
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Rxra_1
0.860 0.557
Rxra
M03422_2.00
Mus musculus
RGGTCATGACCY

RGGTCATGACCY
SELEX
Jolma et al.(2013)
Rxra_2
0.860 0.557
RXRA
M05671_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
0.860 0.557
RXRA
M05882_2.00
Homo sapiens
VRGKTBAAAGGTYRH

DYRACCTTTVAMCYB
SMiLE-seq
Isakova et al.(2017)
RXRa
0.860 0.557
RXRA
M07993_2.00
Homo sapiens
NRRGGTCA

TGACCYYN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
0.860 0.557
RXRA
M07994_2.00
Homo sapiens
DDNNMRRGGTCANDN

NHNTGACCYYKNNHH
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
0.860 0.557
RXRA
M09294_2.00
Homo sapiens
VDDDNDNNVRRRGGKCAVDV

BHBTGMCCYYYBNNHNHHHB
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
0.860 0.557
Rxra
M09306_2.00
Mus musculus
DDVNNNNNRAGKTCAAGGYCA

TGRCCTTGAMCTYNNNNNBHH
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
0.860 0.557
RXRA
M11182_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RXRA_07
0.860 0.557
RXRA
M05672_2.00
Homo sapiens
RRGGTCAAAGGTCAH

DTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
0.860 0.557
Rxrb
M02402_2.00
Mus musculus
VRGGTCAH

DTGACCYB
PBM
Weirauch et al.(2014)
pTH2861
0.857 0.529
RXRB
M03415_2.00
Homo sapiens
RRGGTCAAAGGTCA

TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRB_1
0.857 0.529
Rxrb
M03435_2.00
Mus musculus
GRGGTCAAAGGTCA

TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
Rxrb_1
0.857 0.529
RXRB
M05681_2.00
Homo sapiens
RRGGTCAAAGGTCAN

NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1
0.857 0.529
RXRB
M05682_2.00
Homo sapiens
RRGGTCAYGACCYY

RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2
0.857 0.529
RXRB
M09297_2.00
Homo sapiens
DSAGGTCASD

HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C
0.857 0.529
Rxrb
M09330_2.00
Mus musculus
DSAGGTCASD

HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C
0.857 0.529
RXRB
M05683_2.00
Homo sapiens
RRGGTCAAAGGTCRN

NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1
0.857 0.529
RXRB
M05684_2.00
Homo sapiens
RRGGTCRYGACCYY

RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2
0.857 0.529
Hr78
M06430_2.00
Drosophila melanogaster
HVAGGTCA

TGACCTBD
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
0.851 0.529
Q95WG3_ACRMI
M02424_2.00
Acropora millepora
NRAGGTCAN

NTGACCTYN
PBM
Weirauch et al.(2014)
pTH6144
0.849 0.557
Esr1
M00813_2.00
Mus musculus
NRKGTCANNN

NNNTGACMYN
PBM
Weirauch et al.(2013)
pTH3510
0.831 0.500
ESR1
M03356_2.00
Homo sapiens
NRGGTCAMVRTGACCTK

MAGGTCAYBKTGACCYN
SELEX
Jolma et al.(2013)
ESR1_1
0.831 0.500
ESR1
M05569_2.00
Homo sapiens
NAGGTCAYSRTGACCTN

NAGGTCAYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX
0.831 0.500
ESR1
M05571_2.00
Homo sapiens
NRGGTCANSNTGACCYN

NRGGTCANSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX
0.831 0.500
ESR1
M07985_2.00
Homo sapiens
DNBYMAAGGTCANN

NNTGACCTTKRVNH
ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford
0.831 0.500
ESR1
M08217_2.00
Homo sapiens
NHNRGGTCANNNTGNCCY

RGGNCANNNTGACCYNDN
ChIP-seq
Contrino et al.(2012)
Mv66
0.831 0.500
ESR1
M08218_2.00
Homo sapiens
CCAAGGTCAS

STGACCTTGG
ChIP-seq
Contrino et al.(2012)
Mv67
0.831 0.500
ESR1
M09267_2.00
Homo sapiens
RGGKCABMNTGMCCY

RGGKCANKVTGMCCY
Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A
0.831 0.500
Esr1
M09309_2.00
Mus musculus
RGGDCABKSTGWCCY

RGGWCASMVTGHCCY
Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A
0.831 0.500
ESR1
M09604_2.00
Homo sapiens
NRGGTCANNNTGACC

GGTCANNNTGACCYN
Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished
0.831 0.500
ESR1
M11098_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_01
0.831 0.500
ESR1
M11099_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q4
0.831 0.500
ESR1
M11100_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01
0.831 0.500
ESR1
M11101_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02
0.831 0.500
ESR1
M11102_2.00
Homo sapiens
NHRGGTCAVNNHNNHYBNN

NNVRDNNDNNBTGACCYDN
Transfac
Matys et al.(2006)
V$ER_Q6
0.831 0.500
ESR1
M11103_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_04
0.831 0.500
ESR1
M11104_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_05
0.831 0.500
ESR1
M05570_2.00
Homo sapiens
NAGGTCAYSRYGACCTH

DAGGTCRYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX
0.831 0.500
ESR1
M05572_2.00
Homo sapiens
NRGGTCANSBYGACCYN

NRGGTCRVSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX
0.831 0.500
NR4A1
M05601_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1
0.831 0.571
NR4A1
M05602_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2
0.831 0.571
NR4A1
M08153_2.00
Homo sapiens
NAAAGGTCAN

NTGACCTTTN
ChIP-seq
Mathelier et al.(2014)
MA1112.1
0.831 0.571
NR4A1
M09274_2.00
Homo sapiens
AAAKGBCAN

NTGVCMTTT
Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A
0.831 0.571
Nr4a1
M09317_2.00
Mus musculus
NRAADGKCA

TGMCHTTYN
Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B
0.831 0.571
NR4A1
M09608_2.00
Homo sapiens
NNDNAAAGGTCA

TGACCTTTNHNN
Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363
0.831 0.571
NR4A1
M11132_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_01
0.831 0.571
NR4A1
M11133_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_02
0.831 0.571
NR4A1
M11134_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5
0.831 0.571
NR4A1
M05603_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1
0.831 0.571
NR4A1
M05604_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2
0.831 0.571
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.828 0.500
Esr2
M01297_2.00
Mus musculus
NNRGGTCAH

DTGACCYNN
PBM
Lambert et al.(2019)
pTH3511
0.827 0.500
ESR2
M08154_2.00
Homo sapiens
RGGTCASNNWGNCCY

RGGNCWNNSTGACCY
ChIP-seq
Mathelier et al.(2014)
MA0258.2
0.827 0.500
ESR2
M09279_2.00
Homo sapiens
RGGKCRVRSYGMCCY

RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A
0.827 0.500
Esr2
M09311_2.00
Mus musculus
RGGKCRVRSYGMCCY

RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A
0.827 0.500
ESR2
M11146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5_01
0.827 0.500
ESR2
M11147_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5
0.827 0.500
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN

NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.822 0.557
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD

HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.822 0.557
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN

NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.822 0.557
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN

NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.822 0.557
NR1H3
M09264_2.00
Homo sapiens
NHRRGGBHABHNNRGGNCA

TGNCCYNNDVTDVCCYYDN
Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B
0.820 0.500
Nr1h3
M09301_2.00
Mus musculus
VDGDNCARAGKBCAN

NTGVMCTYTGNHCHB
Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A
0.820 0.500
EcR
M06414_2.00
Drosophila melanogaster
RAGGTCAW

WTGACCTY
B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546
0.819 0.514
NR5A1
M05613_2.00
Homo sapiens
NNCAAGGYCRN

NYGRCCTTGNN
SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX
0.816 0.600
Nr5a1
M09322_2.00
Mus musculus
NBYCAAGGYCA

TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B
0.816 0.600
NR5A1
M11142_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5_01
0.816 0.600
NR5A1
M11143_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5
0.816 0.600
NR5A1
M11144_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6_01
0.816 0.600
NR5A1
M11145_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6
0.816 0.600
NR5A1
M05614_2.00
Homo sapiens
NNSAAGGHCRN

NYGDCCTTSNN
SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX
0.816 0.600
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN

NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.815 0.543
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH

DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.815 0.543
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH

DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.815 0.543
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.815 0.543
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN

NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.815 0.543
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.815 0.543
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH

DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.815 0.543
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA

TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.815 0.543
THRB
M11150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.815 0.543
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN

NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.815 0.543
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN

NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.815 0.543
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.815 0.543
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH

DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.815 0.543
NR5A2
M05589_2.00
Homo sapiens
YCAAGGYCRYGRCCTTSR

YSAAGGYCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1
0.815 0.600
NR5A2
M05590_2.00
Homo sapiens
NYCAAGGTCAH

DTGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2
0.815 0.600
NR5A2
M05591_2.00
Homo sapiens
YGRCCTTSVNYSAAGGYCR

YGRCCTTSRNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3
0.815 0.600
NR5A2
M09271_2.00
Homo sapiens
NBYCAAGGYCA

TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B
0.815 0.600
NR5A2
M11126_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5_01
0.815 0.600
NR5A2
M11127_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5
0.815 0.600
NR5A2
M11128_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q6
0.815 0.600
NR5A2
M05592_2.00
Homo sapiens
YCAAGGYCRYGACCTTSR

YSAAGGTCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1
0.815 0.600
NR5A2
M05593_2.00
Homo sapiens
NYCAAGGTCRH

DYGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2
0.815 0.600
NR5A2
M05594_2.00
Homo sapiens
YGRCCTTSVNBSAAGGYCR

YGRCCTTSVNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3
0.815 0.600
ftz-f1
M02407_2.00
Drosophila melanogaster
RRGGTCAH

DTGACCYY
PBM
Weirauch et al.(2014)
pTH5709
0.811 0.614
ftz-f1
M06417_2.00
Drosophila melanogaster
MMRKYYSAAGGWCRCYGM

KCRGYGWCCTTSRRMYKK
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
0.811 0.614
ftz-f1
M06418_2.00
Drosophila melanogaster
AAGGTCA

TGACCTT
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
0.811 0.614
PPARA
M09295_2.00
Homo sapiens
NWSTRGGBSARAGGKBA

TVMCCTYTSVCCYASWN
Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B
0.806 0.543
Ppara
M09314_2.00
Mus musculus
HWSTRGGBSARAGGKBA

TVMCCTYTSVCCYASWD
Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A
0.806 0.543
PPARA
M11183_2.00
Homo sapiens
CWRAWCYAGGNCAWAGKTCA

TGAMCTWTGNCCTRGWTYWG
Transfac
Matys et al.(2006)
V$PPARA_01
0.806 0.543
PPARA
M11184_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARA_Q6
0.806 0.543
Pparg
M05884_2.00
Mus musculus
HWNTRGGKYANB

VNTRMCCYANWD
SMiLE-seq
Isakova et al.(2017)
PPARg
0.801 0.543
PPARG
M02707_2.00
Homo sapiens
STRGGTCANNDTGACCYANW

WNTRGGTCAHNNTGACCYAS
SELEX
Mathelier et al.(2014)
MA0066.1
0.801 0.543
PPARG
M09278_2.00
Homo sapiens
VWSKRGGKSARAGGKSA

TSMCCTYTSMCCYMSWB
Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A
0.801 0.543
Pparg
M09299_2.00
Mus musculus
HWBTRGGBSARAGGKNA

TNMCCTYTSVCCYAVWD
Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A
0.801 0.543
Pparg
M09612_2.00
Mus musculus
TRGGNCARAGGKCA

TGMCCTYTGNCCYA
Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511
0.801 0.543
PPARG
M11138_2.00
Homo sapiens
NNDRRGGTCAAAGGTCAHVND

HNBDTGACCTTTGACCYYHNN
Transfac
Matys et al.(2006)
V$PPARG_01
0.801 0.543
PPARG
M11139_2.00
Homo sapiens
AWBTRGGTCACNDTGACCTASTT

AASTAGGTCAHNGTGACCYAVWT
Transfac
Matys et al.(2006)
V$PPARG_02
0.801 0.543
PPARG
M11140_2.00
Homo sapiens
WWBHRGGNYAAAGKTCA

TGAMCTTTRNCCYDVWW
Transfac
Matys et al.(2006)
V$PPARG_03
0.801 0.543
PPARG
M11141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARG_Q6
0.801 0.543
nhr-25
M08226_2.00
Caenorhabditis elegans
MAAGGTCA

TGACCTTK
ChIP-seq
Contrino et al.(2012)
Mw160
0.797 0.614
Nr5a2
M00816_2.00
Mus musculus
VAAGGTCR

YGACCTTB
PBM
Weirauch et al.(2013)
pTH3468
0.793 0.600
Nr5a2
M08158_2.00
Mus musculus
VRDBTCAAGGYCANN

NNTGRCCTTGAVHYB
ChIP-seq
Mathelier et al.(2014)
MA0505.1
0.793 0.600
Nr5a2
M09320_2.00
Mus musculus
NBYCAAGGYCA

TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A
0.793 0.600
Nr5a2
M09616_2.00
Mus musculus
BYCAAGGYCA

TGRCCTTGRV
Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295
0.793 0.600
Nr5a2
M09615_2.00
Mus musculus
BYCAAGGYCA

TGRCCTTGRV
Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019
0.793 0.600
THRA
M03368_2.00
Homo sapiens
DTGACCTYATVAGGTCAH

DTGACCTBATRAGGTCAH
SELEX
Jolma et al.(2013)
THRA_1
0.788 0.543
THRA
M09275_2.00
Homo sapiens
RGKWSDNNYVAGGWSAN

NTSWCCTBRNNHSWMCY
Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C
0.788 0.543
Thra
M09333_2.00
Mus musculus
VRGGKCANNYVRGGHCA

TGDCCYBRNNTGMCCYB
Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C
0.788 0.543
Thra
M09619_2.00
Mus musculus
GGKCANNYVRGGHCA

TGDCCYBRNNTGMCC
Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347
0.788 0.543
THRA
M11135_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RALPHA_Q6
0.788 0.543
NR1D2
M05659_2.00
Homo sapiens
DWWNKRKGTYANTRKGTYRN

NYRACMYANTRACMYMNWWH
SELEX
Yin et al.(2017)
NR1D2_eDBD_HT-SELEX
0.787 0.557
Nr1d2
M09313_2.00
Mus musculus
NVRDVWVTRRGTCANDVDN

NHBHNTGACYYABWBHYBN
Misc
Kulakovskiy et al.(2013)
NR1D2_MOUSE.H11MO.0.A
0.787 0.557
NR1D2
M05660_2.00
Homo sapiens
NWWNBRGGKYAVTRGGKCRN

NYGMCCYABTRMCCYVNWWN
SELEX
Yin et al.(2017)
NR1D2_eDBD_Methyl-HT-SELEX
0.787 0.557
GAG_AVIER
M11193_2.00
Avian erythroblastosis virus
VHNTRAGGTCACSSNN

NNSSGTGACCTYANDB
Transfac
Matys et al.(2006)
V$T3R_01
0.786 0.529
Nr1h2
M09620_2.00
Mus musculus
RGGTYACTNNAGGTCA

TGACCTNNAGTRACCY
Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512
0.783 0.486
NR6A1
M05627_2.00
Homo sapiens
NNSAAGKTCAAGKKYRN

NYRMMCTTGAMCTTSNN
SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX
0.779 0.557
NR6A1
M09284_2.00
Homo sapiens
AAGKTCAAGKTCA

TGAMCTTGAMCTT
Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B
0.779 0.557
NR6A1
M11148_2.00
Homo sapiens
NKCAAGKTCAAGKTCANN

NNTGAMCTTGAMCTTGMN
Transfac
Matys et al.(2006)
V$GCNF_01
0.779 0.557
NR6A1
M11149_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCNF_Q3
0.779 0.557
NR6A1
M05628_2.00
Homo sapiens
NYSAAGKTCAAGKKCRN

NYGMMCTTGAMCTTSRN
SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX
0.779 0.557
NR1D1
M05605_2.00
Homo sapiens
NWWNTRGGTYASTRGGTCAN

NTGACCYASTRACCYANWWN
SELEX
Yin et al.(2017)
NR1D1_eDBD_HT-SELEX
0.775 0.557
NR1D1
M09276_2.00
Homo sapiens
DRVNMASTGGGNCANDNDN

NHNHNTGNCCCASTKNBYH
Misc
Kulakovskiy et al.(2013)
NR1D1_HUMAN.H11MO.0.B
0.775 0.557
Nr1d1
M09310_2.00
Mus musculus
DRVNMASTGGGNCANDNDN

NHNHNTGNCCCASTKNBYH
Misc
Kulakovskiy et al.(2013)
NR1D1_MOUSE.H11MO.0.A
0.775 0.557
NR1D1
M11136_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REVERBALPHA_Q6
0.775 0.557
NR1D1
M05606_2.00
Homo sapiens
NAWNKRGGTYAGTRGGTCRN

NYGACCYACTRACCYMNWTN
SELEX
Yin et al.(2017)
NR1D1_eDBD_Methyl-HT-SELEX
0.775 0.557
Nr4a2
M00818_2.00
Mus musculus
AAAGGTCA

TGACCTTT
PBM
Weirauch et al.(2013)
pTH3467
0.746 0.557
NR4A2
M03383_2.00
Homo sapiens
AGGTCAHNNNDTGACCT

AGGTCAHNNNDTGACCT
SELEX
Jolma et al.(2013)
NR4A2_1
0.746 0.557
NR4A2
M03384_2.00
Homo sapiens
TGACCTTTAAAGGTCA

TGACCTTTAAAGGTCA
SELEX
Jolma et al.(2013)
NR4A2_2
0.746 0.557
NR4A2
M03385_2.00
Homo sapiens
NBTAAAGGTCA

TGACCTTTAVN
SELEX
Jolma et al.(2013)
NR4A2_3
0.746 0.557
NR4A2
M05639_2.00
Homo sapiens
NWAAKGTCAN

NTGACMTTWN
SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX
0.746 0.557
NR4A2
M05881_2.00
Homo sapiens
NAAAKGTYA

TRACMTTTN
SMiLE-seq
Isakova et al.(2017)
NR4A2
0.746 0.557
NR4A2
M09286_2.00
Homo sapiens
RAAGGTCAV

BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C
0.746 0.557
Nr4a2
M09323_2.00
Mus musculus
RAAGGTCAV

BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C
0.746 0.557
NR4A2
M11151_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3_01
0.746 0.557
NR4A2
M11152_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3
0.746 0.557
NR4A2
M08461_2.00
Homo sapiens
RAGGTCAM

KTGACCTY
COMPILED
Mathelier et al.(2014)
MA0160.1
0.746 0.557
NR4A2
M05640_2.00
Homo sapiens
NAAAGGTCRN

NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX
0.746 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA15590 Nuclear receptor 97 166

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

3277 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBG07680 Caenorhabditis briggsae CBG07680 I 0.980
CBN09702 Caenorhabditis brenneri CBN09702 I 0.980
nhr-91 Caenorhabditis elegans WBGene00003681 I 0.980
CRE15343 Caenorhabditis remanei CRE15343 I 0.979
RORC Cavia porcellus ENSCPOG00000023600 I 0.953
RORC Canis familiaris ENSCAFG00000012884 I 0.953
ENSMPUG00000003550 Mustela putorius furo ENSMPUG00000003550 I 0.953
ENSAMEG00000000363 Ailuropoda melanoleuca ENSAMEG00000000363 I 0.953
RORA Oryctolagus cuniculus ENSOCUG00000012900 I 0.952
ENSP00000261523 Macaca fascicularis ENSP00000261523 I 0.952
ENSONIG00000010247 Oreochromis niloticus ENSONIG00000010247 I 0.952
ENSONIG00000015603 Oreochromis niloticus ENSONIG00000015603 I 0.952
ENSONIG00000015289 Oreochromis niloticus ENSONIG00000015289 I 0.952
ENSONIG00000004686 Oreochromis niloticus ENSONIG00000004686 I 0.952
RORA Otolemur garnettii ENSOGAG00000007357 I 0.952
RORA Canis familiaris ENSCAFG00000016700 I 0.952
Cmyd_10000975 Chelonia mydas Cmyd_10000975 I 0.952
Rora Mus musculus ENSMUSG00000032238 D 0.952
RORA Monodelphis domestica ENSMODG00000011532 I 0.952
Brh_R004006 Buceros rhinoceros Brh_R004006 I 0.952
RORA Macaca mulatta ENSMMUG00000018192 I 0.952
ENSSTOG00000012400 Ictidomys tridecemlineatus ENSSTOG00000012400 I 0.952
RORA Choloepus hoffmanni ENSCHOG00000011593 I 0.952
ENSOARG00000020816 Ovis aries ENSOARG00000020816 I 0.952
RORA Ochotona princeps ENSOPRG00000012364 I 0.952
ENSBTAP00000021144-D1 Bos grunniens ENSBTAP00000021144-D1 I 0.952
RORA Ornithorhynchus anatinus ENSOANG00000012345 I 0.952
ENSNLEG00000011865 Nomascus leucogenys ENSNLEG00000011865 I 0.952
RORA Sus scrofa ENSSSCG00000004576 I 0.952
XP_002937524 Xenopus tropicalis XP_002937524 I 0.952
ENSPPYG00000006528 Pongo abelii ENSPPYG00000006528 I 0.952
Pvit_17370 Pogona vitticeps Pvit_17370 I 0.952
gw.311.78.1 Branchiostoma floridae gw.311.78.1 I 0.952
ENSPFOG00000017745 Poecilia formosa ENSPFOG00000017745 I 0.952
ENSPFOG00000012359 Poecilia formosa ENSPFOG00000012359 I 0.952
Pvit_17369 Pogona vitticeps Pvit_17369 I 0.952
Pvit_09819 Pogona vitticeps Pvit_09819 I 0.952
Ogr03392 Ophisaurus gracilis Ogr03392 I 0.952
ENSPSIG00000011314 Pelodiscus sinensis ENSPSIG00000011314 I 0.952
RORA Pan troglodytes ENSPTRG00000007134 I 0.952
Myotis_brandtii_RORA_10029423 Myotis brandtii Myotis_brandtii_RORA_10029423 I 0.952
ENSPFOG00000003699 Poecilia formosa ENSPFOG00000003699 I 0.952
Gfo_R008829 Geospiza fortis Gfo_R008829 I 0.952
roraa Oryzias latipes ENSORLG00000007645 I 0.952
Rora Rattus norvegicus ENSRNOG00000027145 I 0.952
rorca Oryzias latipes ENSORLG00000003765 I 0.952
rorcb Danio rerio ENSDARG00000017780 I 0.952
ENSPANG00000017172 Papio anubis ENSPANG00000017172 I 0.952
RORA Bos taurus ENSBTAG00000015904 I 0.952
ENSAPLG00000005866 Anas platyrhynchos ENSAPLG00000005866 I 0.952
RORA Procavia capensis ENSPCAG00000006566 I 0.952
RORA Pteropus vampyrus ENSPVAG00000011408 I 0.952
rora Xenopus tropicalis XB-GENE-478535 I 0.952
ENSSHAG00000015734 Sarcophilus harrisii ENSSHAG00000015734 I 0.952
RORA Tupaia belangeri ENSTBEG00000003065 I 0.952
ENSAMXG00000000403 Astyanax mexicanus ENSAMXG00000000403 I 0.952
rorca Gasterosteus aculeatus ENSGACG00000012280 I 0.952
roraa Gasterosteus aculeatus ENSGACG00000010672 I 0.952
RORA Homo sapiens ENSG00000069667 D 0.952
RORA Felis catus ENSFCAG00000013642 I 0.952
rorcb Gasterosteus aculeatus ENSGACG00000015341 I 0.952
ENSTSYG00000001170 Tarsius syrichta ENSTSYG00000001170 I 0.952
RORA Gorilla gorilla ENSGGOG00000000541 I 0.952
rorcb Takifugu rubripes ENSTRUG00000005569 I 0.952
roraa Takifugu rubripes ENSTRUG00000010553 I 0.952
RORA Cavia porcellus ENSCPOG00000008494 I 0.952
RORA Callithrix jacchus ENSCJAG00000003989 I 0.952
RORA Tursiops truncatus ENSTTRG00000007718 I 0.952
ENSFALG00000012589 Ficedula albicollis ENSFALG00000012589 I 0.952
RORA Dasypus novemcinctus ENSDNOG00000043276 I 0.952
Rora Dipodomys ordii ENSDORG00000001826 I 0.952
rorca Danio rerio ENSDARG00000057231 I 0.952
ENSXMAG00000019296 Xiphophorus maculatus ENSXMAG00000019296 I 0.952
roraa Danio rerio ENSDARG00000031768 I 0.952
ENSAMEG00000008017 Ailuropoda melanoleuca ENSAMEG00000008017 I 0.952
RORA Equus caballus ENSECAG00000016384 I 0.952
RORA Erinaceus europaeus ENSEEUG00000015809 I 0.952
RORA Echinops telfairi ENSETEG00000001493 I 0.952
RORA Vicugna pacos ENSVPAG00000007893 I 0.952
ENSCSAG00000012081 Chlorocebus sabaeus ENSCSAG00000012081 I 0.952
ENSXMAG00000003228 Xiphophorus maculatus ENSXMAG00000003228 I 0.952
ENSGMOG00000006930 Gadus morhua ENSGMOG00000006930 I 0.952
RORA Gallus gallus ENSGALG00000003759 I 0.952
roraa Tetraodon nigroviridis ENSTNIG00000008390 I 0.952
ENSGMOG00000012277 Gadus morhua ENSGMOG00000012277 I 0.952
rorcb Tetraodon nigroviridis ENSTNIG00000015337 I 0.952
RORA Meleagris gallopavo ENSMGAG00000004471 I 0.952
ENSAMXG00000009363 Astyanax mexicanus ENSAMXG00000009363 I 0.952
RORA Taeniopygia guttata ENSTGUG00000005333 I 0.952
RORA Myotis lucifugus ENSMLUG00000002493 I 0.952
RORA Microcebus murinus ENSMICG00000010861 I 0.952
ENSLOCG00000006502 Lepisosteus oculatus ENSLOCG00000006502 I 0.952
ENSLOCG00000014779 Lepisosteus oculatus ENSLOCG00000014779 I 0.952
ENSLACG00000017448 Latimeria chalumnae ENSLACG00000017448 I 0.952
Aan_R015083 Calypte anna Aan_R015083 I 0.952
Afo_R006180 Aptenodytes forsteri Afo_R006180 I 0.952
RORA Loxodonta africana ENSLAFG00000000577 I 0.952
rorca Takifugu rubripes ENSTRUG00000003189 I 0.952
ENSCSAVG00000009992 Ciona savignyi ENSCSAVG00000009992 I 0.951
ENSCING00000002152 Ciona intestinalis ENSCING00000002152 I 0.951
ENSXMAG00000015567 Xiphophorus maculatus ENSXMAG00000015567 I 0.950
ENSSHAG00000015984 Sarcophilus harrisii ENSSHAG00000015984 I 0.950
ENSPSIG00000016262 Pelodiscus sinensis ENSPSIG00000016262 I 0.950
ENSAPLG00000007187 Anas platyrhynchos ENSAPLG00000007187 I 0.950
ENSTGUG00000000264 Taeniopygia guttata ENSTGUG00000000264 I 0.950
ENSSHAG00000018693 Sarcophilus harrisii ENSSHAG00000018693 I 0.950
RORB Pan troglodytes ENSPTRG00000021025 I 0.950
ENSXMAG00000018442 Xiphophorus maculatus ENSXMAG00000018442 I 0.950
RORB Pteropus vampyrus ENSPVAG00000007216 I 0.950
RORB Tupaia belangeri ENSTBEG00000010761 I 0.950
ENSSTOG00000019386 Ictidomys tridecemlineatus ENSSTOG00000019386 I 0.950
ENSTSYG00000007907 Tarsius syrichta ENSTSYG00000007907 I 0.950
Rorc Rattus norvegicus ENSRNOG00000020836 I 0.950
RORC Tursiops truncatus ENSTTRG00000003151 I 0.950
ENSAMXG00000018669 Astyanax mexicanus ENSAMXG00000018669 I 0.950
ENSSHAG00000002191 Sarcophilus harrisii ENSSHAG00000002191 I 0.950
RORC Sus scrofa ENSSSCG00000026427 I 0.950
Rorb Rattus norvegicus ENSRNOG00000013413 I 0.950
RORB Vicugna pacos ENSVPAG00000003390 I 0.950
ENSSTOG00000013264 Ictidomys tridecemlineatus ENSSTOG00000013264 I 0.950
rorb Tetraodon nigroviridis ENSTNIG00000014682 D 0.950
RORB Sus scrofa ENSSSCG00000005268 I 0.950
ENSAMEG00000015664 Ailuropoda melanoleuca ENSAMEG00000015664 I 0.950
ENSTRUG00000002901 Takifugu rubripes ENSTRUG00000002901 I 0.950
RORB Canis familiaris ENSCAFG00000001769 I 0.950
RORB Loxodonta africana ENSLAFG00000012757 I 0.950
RORC Loxodonta africana ENSLAFG00000020960 I 0.950
ENSLACG00000017778 Latimeria chalumnae ENSLACG00000017778 I 0.950
ENSLACG00000006103 Latimeria chalumnae ENSLACG00000006103 I 0.950
RORB Gallus gallus ENSGALG00000015150 I 0.950
RORB Gorilla gorilla ENSGGOG00000011970 I 0.950
ENSLOCG00000009712 Lepisosteus oculatus ENSLOCG00000009712 I 0.950
ENSMEUG00000008146 Macropus eugenii ENSMEUG00000008146 I 0.950
RORB Macaca mulatta ENSMMUG00000012571 I 0.950
RORB Monodelphis domestica ENSMODG00000002046 I 0.950
RORB Myotis lucifugus ENSMLUG00000006436 I 0.950
RORB Microcebus murinus ENSMICG00000007512 I 0.950
ENSMGAG00000002222 Meleagris gallopavo ENSMGAG00000002222 I 0.950
ENSGALG00000001035 Gallus gallus ENSGALG00000001035 I 0.950
RORB Cavia porcellus ENSCPOG00000010612 I 0.950
RORC Equus caballus ENSECAG00000000918 I 0.950
RORB Equus caballus ENSECAG00000024312 I 0.950
Rorc Dipodomys ordii ENSDORG00000015326 I 0.950
RORC Dasypus novemcinctus ENSDNOG00000033488 I 0.950
rorb Danio rerio ENSDARG00000033498 I 0.950
RORB Erinaceus europaeus ENSEEUG00000014274 I 0.950
RORB Echinops telfairi ENSETEG00000017457 I 0.950
RORB Homo sapiens ENSG00000198963 D 0.950
rorb Gasterosteus aculeatus ENSGACG00000011556 I 0.950
RORB Felis catus ENSFCAG00000011421 I 0.950
ENSCSAG00000008161 Chlorocebus sabaeus ENSCSAG00000008161 I 0.950
ENSFALG00000012763 Ficedula albicollis ENSFALG00000012763 I 0.950
RORB Callithrix jacchus ENSCJAG00000001216 I 0.950
ENSMODG00000004462 Monodelphis domestica ENSMODG00000004462 I 0.950
RORC Bos taurus ENSBTAG00000017405 I 0.950
ENSPANG00000024927 Papio anubis ENSPANG00000024927 I 0.950
rorb Oryzias latipes ENSORLG00000012441 I 0.950
RORB Bos taurus ENSBTAG00000021699 I 0.950
RORC Ochotona princeps ENSOPRG00000018310 I 0.950