CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA16882
(
Caenorhabditis japonica
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CJA16882
T301983_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.774
0.523
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.774
0.523
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA16882
Nuclear receptor
9
73
GPCKVCGQPAFGRNYGVMSCRACAAFFRRAAGRRIENCALHEHEKNRFQCKKCRLKKCYDVGMDS
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis japonica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy