CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA17398
(
Caenorhabditis japonica
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CJA17398
T301985_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA17398a
Nuclear receptor
23
108
EHCAVCGDRVNSNRYGVPACLGCIVFFRRAIVNNSKYKCVKHQRCVITNGKQQVVLFQRICAPVSEFRCSCRYCRLQKCLMVGMRP
CJA17398b
Nuclear receptor
23
92
EHCAVCGDRVNSNRYGVPACLGCIVFFRRAIVNNSKYKCVKHQRCVITNEFRCSCRYCRLQKCLMVGMRP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis japonica
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN12278
Caenorhabditis brenneri
CBN12278
N
0.966
CBG13579
Caenorhabditis briggsae
CBG13579
N
0.963
CRE13698
Caenorhabditis remanei
CRE13698
N
0.963
CJA01109
Caenorhabditis japonica
CJA01109
N
0.962
nhr-274
Caenorhabditis elegans
WBGene00021522
N
0.962
Hba_13467
Heterorhabditis bacteriophora
Hba_13467
N
0.960
CBN05437
Caenorhabditis brenneri
CBN05437
N
0.948
CBG06579
Caenorhabditis briggsae
CBG06579
N
0.947
nhr-260
Caenorhabditis elegans
WBGene00016517
N
0.943
CRE09282
Caenorhabditis remanei
CRE09282
N
0.942
scaffold665-EXSNAP2012.4
Pristionchus exspectatus
scaffold665-EXSNAP2012.4
N
0.935
CBN13714
Caenorhabditis brenneri
CBN13714
N
0.920
nhr-262
Caenorhabditis elegans
WBGene00008619
N
0.910
CRE09284
Caenorhabditis remanei
CRE09284
N
0.903
CBG10365
Caenorhabditis briggsae
CBG10365
N
0.903
nhr-181
Caenorhabditis elegans
WBGene00018189
N
0.903
CRE05426
Caenorhabditis remanei
CRE05426
N
0.893
CRE02503
Caenorhabditis remanei
CRE02503
N
0.890
CRE09477
Caenorhabditis remanei
CRE09477
N
0.890
CBN09493
Caenorhabditis brenneri
CBN09493
N
0.889
CBG11459
Caenorhabditis briggsae
CBG11459
N
0.869
nhr-175
Caenorhabditis elegans
WBGene00008630
N
0.814
CJA43179
Caenorhabditis japonica
CJA43179
N
0.804
CJA08688
Caenorhabditis japonica
CJA08688
N
0.780
CBN13717
Caenorhabditis brenneri
CBN13717
N
0.769