CRE05778 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE05778 T302061_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.851 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.851 0.514
nhr-177
M02419_2.00 		Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Weirauch et al.(2014)
pTH9044 		0.807 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE05778 Nuclear receptor 8 78

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE14845 Caenorhabditis remanei CRE14845 I 0.921
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.910
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.903
CJA19466 Caenorhabditis japonica CJA19466 I 0.882
CBG19144 Caenorhabditis briggsae CBG19144 I 0.882
CBG19141 Caenorhabditis briggsae CBG19141 I 0.882
CJA03572 Caenorhabditis japonica CJA03572 I 0.861
CRE18428 Caenorhabditis remanei CRE18428 I 0.860
CRE14847 Caenorhabditis remanei CRE14847 I 0.853
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.851
CRE14848 Caenorhabditis remanei CRE14848 I 0.850
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.844
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.836
CRE18698 Caenorhabditis remanei CRE18698 I 0.826
CRE05779 Caenorhabditis remanei CRE05779 I 0.823
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.821
CBG06387 Caenorhabditis briggsae CBG06387 I 0.820
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.809
nhr-177 Caenorhabditis elegans WBGene00017503 D 0.807
CBG06614 Caenorhabditis briggsae CBG06614 I 0.805
CRE16082 Caenorhabditis remanei CRE16082 I 0.801
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.788
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.784
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.780
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.780
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.780
CRE08755 Caenorhabditis remanei CRE08755 I 0.778
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.768
CRE05044 Caenorhabditis remanei CRE05044 I 0.761
CRE08749 Caenorhabditis remanei CRE08749 I 0.760
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.760
CBN00299 Caenorhabditis brenneri CBN00299 I 0.756
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.754