CRE09222 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE09222 T302140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-177
M02419_2.00 		Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Weirauch et al.(2014)
pTH9044 		0.773 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE09222 Nuclear receptor 24 93

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.991
CBG01353 Caenorhabditis briggsae CBG01353 I 0.989
CBG01357 Caenorhabditis briggsae CBG01357 N 0.924
CRE09225 Caenorhabditis remanei CRE09225 N 0.880
nhr-99 Caenorhabditis elegans WBGene00003689 I 0.838
CBN17580 Caenorhabditis brenneri CBN17580 N 0.838
nhr-203 Caenorhabditis elegans WBGene00019743 N 0.818
CRE14845 Caenorhabditis remanei CRE14845 I 0.816
CBG06614 Caenorhabditis briggsae CBG06614 I 0.810
CBG01229 Caenorhabditis briggsae CBG01229 N 0.809
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.808
CBN21664 Caenorhabditis brenneri CBN21664 N 0.797
CBG19144 Caenorhabditis briggsae CBG19144 I 0.791
CBN00299 Caenorhabditis brenneri CBN00299 I 0.787
CRE16082 Caenorhabditis remanei CRE16082 I 0.779
CRE27865 Caenorhabditis remanei CRE27865 N 0.776
nhr-177 Caenorhabditis elegans WBGene00017503 D 0.773
CRE18428 Caenorhabditis remanei CRE18428 I 0.772
CRE09227 Caenorhabditis remanei CRE09227 N 0.761
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.757
CRE09224 Caenorhabditis remanei CRE09224 N 0.755
CRE05779 Caenorhabditis remanei CRE05779 I 0.754
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.752