CRE09416 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE09416 T302149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.977 0.886
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE09416 Nuclear receptor 78 147

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE10779 Caenorhabditis remanei CRE10779 I 0.978
CRE07033 Caenorhabditis remanei CRE07033 I 0.978
CBG22587 Caenorhabditis briggsae CBG22587 I 0.978
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.977
CJA14248 Caenorhabditis japonica CJA14248 I 0.976
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.976
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.976
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.976
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.976
L898_g11608 Steinernema monticolum L898_g11608 I 0.975
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.975
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.975
NECAME_02375 Necator americanus NECAME_02375 I 0.975
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.975
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.975
L893_g263 Steinernema glaseri L893_g263 I 0.975
L889_g31970 Steinernema feltiae L889_g31970 I 0.975
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.975
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.970
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.970
ASU_00971 Ascaris suum ASU_00971 I 0.970
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.968
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.967
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.967
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.967
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.966
CBG14996 Caenorhabditis briggsae CBG14996 I 0.966
CJA18307 Caenorhabditis japonica CJA18307 I 0.965
CBN21958 Caenorhabditis brenneri CBN21958 I 0.962
CBN00088 Caenorhabditis brenneri CBN00088 I 0.962
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.960
CRE07034 Caenorhabditis remanei CRE07034 I 0.959
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.958
CRE07035 Caenorhabditis remanei CRE07035 I 0.948
CBG14997 Caenorhabditis briggsae CBG14997 I 0.930
CJA39530 Caenorhabditis japonica CJA39530 I 0.905
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.904
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.902
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.894
CRE08264 Caenorhabditis remanei CRE08264 I 0.894
CBG03860 Caenorhabditis briggsae CBG03860 I 0.894
CBN05776 Caenorhabditis brenneri CBN05776 I 0.894
CJA19445 Caenorhabditis japonica CJA19445 I 0.893
CBN04415 Caenorhabditis brenneri CBN04415 I 0.893
CBG13142 Caenorhabditis briggsae CBG13142 I 0.893
CRE26423 Caenorhabditis remanei CRE26423 I 0.893
CBN32300 Caenorhabditis brenneri CBN32300 I 0.893
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.892
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.892
CJA02727 Caenorhabditis japonica CJA02727 I 0.892
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.892
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.892
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.886
L889_g15424 Steinernema feltiae L889_g15424 I 0.883
L892_g3438 Steinernema scapterisci L892_g3438 I 0.883
L898_g9613 Steinernema monticolum L898_g9613 I 0.883
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.883
L893_g33656 Steinernema glaseri L893_g33656 I 0.883
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.881
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.874
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.865
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.865
L893_g5404 Steinernema glaseri L893_g5404 I 0.852
L889_g366 Steinernema feltiae L889_g366 I 0.852
L892_g17832 Steinernema scapterisci L892_g17832 I 0.852
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.852
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.840
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.832
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.828
L889_g16305 Steinernema feltiae L889_g16305 I 0.828
L892_g17146 Steinernema scapterisci L892_g17146 I 0.828
L898_g5338 Steinernema monticolum L898_g5338 I 0.828
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.828
L893_g6565 Steinernema glaseri L893_g6565 I 0.828
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.824
CBG03466 Caenorhabditis briggsae CBG03466 I 0.824
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.824
CRE29874 Caenorhabditis remanei CRE29874 I 0.824
CJA14611 Caenorhabditis japonica CJA14611 I 0.824
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.824
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.824
CBN28641 Caenorhabditis brenneri CBN28641 I 0.824
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.824
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.824
CRE22212 Caenorhabditis remanei CRE22212 I 0.824
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.824
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.823
CJA06107 Caenorhabditis japonica CJA06107 I 0.823
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.817
CBG04240 Caenorhabditis briggsae CBG04240 I 0.806
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.801
CBN08474 Caenorhabditis brenneri CBN08474 I 0.797
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.797
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.797
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.797
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.797
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.797
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.797
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.797
LOAG_07549 Loa loa LOAG_07549 I 0.797
CJA14035 Caenorhabditis japonica CJA14035 I 0.797
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.797
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.797
CRE21925 Caenorhabditis remanei CRE21925 I 0.797
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.797
CBG22776 Caenorhabditis briggsae CBG22776 I 0.797
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.797
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.797
Bm5457 Brugia malayi Bm5457 I 0.797
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.797
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.792
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.792
L892_g186 Steinernema scapterisci L892_g186 I 0.792
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.792
L889_g25097 Steinernema feltiae L889_g25097 I 0.792
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.792
L898_g18440 Steinernema monticolum L898_g18440 I 0.792
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.792
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.790
CRE24933 Caenorhabditis remanei CRE24933 I 0.787
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.786
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.786
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.783
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.776
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.774
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.765
PPA29597 Pristionchus pacificus PPA29597 I 0.763
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.759
BXY_0791000 Bursaphelenchus xylophilus BXY_0791000 I 0.757
L898_g32368 Steinernema monticolum L898_g32368 I 0.756
L892_g23093 Steinernema scapterisci L892_g23093 I 0.756
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.756
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.754
L889_g2977 Steinernema feltiae L889_g2977 I 0.753
BXY_0816300 Bursaphelenchus xylophilus BXY_0816300 I 0.752
Minc11307 Meloidogyne incognita Minc11307 I 0.749
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.748
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.748
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.747