CRE14116 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE14116 T302178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.748 0.543
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.748 0.543
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.748 0.543
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.748 0.543
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.748 0.543
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.748 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE14116 Nuclear receptor 33 103

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG15006 Caenorhabditis briggsae CBG15006 I 0.997
CRE09911 Caenorhabditis remanei CRE09911 I 0.997
nhr-97 Caenorhabditis elegans WBGene00003687 N 0.996
CBN08571 Caenorhabditis brenneri CBN08571 I 0.996
CBN10811 Caenorhabditis brenneri CBN10811 I 0.996
HCOI02063200 Haemonchus contortus HCOI02063200 N 0.994
HCOI02063400 Haemonchus contortus HCOI02063400 N 0.994
CJA03362 Caenorhabditis japonica CJA03362 N 0.994
HCOI02064100 Haemonchus contortus HCOI02064100 N 0.994
HCOI02063800 Haemonchus contortus HCOI02063800 N 0.994
HCOI02063000 Haemonchus contortus HCOI02063000 N 0.994
HCOI00878400 Haemonchus contortus HCOI00878400 N 0.994
RSKR_0000862400 Rhabditophanes kr3021 RSKR_0000862400 N 0.982
SSTP_0000433200 Strongyloides stercoralis SSTP_0000433200 I 0.981
SPAL_0001690000 Strongyloides papillosus SPAL_0001690000 I 0.980
SVE_0662100 Strongyloides venezuelensis SVE_0662100 I 0.980
PTRK_0000785300 Parastrongyloides trichosuri PTRK_0000785300 I 0.979
ASIM_0000041701 Anisakis simplex ASIM_0000041701 N 0.943
TCNE_0000088101 Toxocara canis TCNE_0000088101 N 0.936
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.936
HPBE_0002162901 Heligmosomoides bakeri HPBE_0002162901 N 0.910
OESDEN_16690 Oesophagostomum dentatum OESDEN_16690 N 0.908
ANCDUO_22516 Ancylostoma duodenale ANCDUO_22516 N 0.908
SVUK_0000487901 Strongylus vulgaris SVUK_0000487901 N 0.908
L898_g11980 Steinernema monticolum L898_g11980 N 0.897
L893_g2097 Steinernema glaseri L893_g2097 N 0.897
L596_g25326 Steinernema carpocapsae L596_g25326 N 0.897
L892_g27553 Steinernema scapterisci L892_g27553 N 0.897
L889_g23169 Steinernema feltiae L889_g23169 N 0.897
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.868
GPLIN_000686000 Globodera pallida GPLIN_000686000 N 0.868
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.868
CJA04720 Caenorhabditis japonica CJA04720 I 0.857
CBG19604 Caenorhabditis briggsae CBG19604 I 0.857
CRE06667 Caenorhabditis remanei CRE06667 I 0.855
CBN20828 Caenorhabditis brenneri CBN20828 I 0.855
CBN07936 Caenorhabditis brenneri CBN07936 I 0.855
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.855
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 I 0.844
Minc11986 Meloidogyne incognita Minc11986 I 0.844
NECAME_05125 Necator americanus NECAME_05125 I 0.835
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.835
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.835
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.835
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.835
LOAG_05485 Loa loa LOAG_05485 I 0.821
Bm4894 Brugia malayi Bm4894 I 0.821
Bm12053 Brugia malayi Bm12053 I 0.821
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.821
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.821
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.821
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.821
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.821
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.821
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.821
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.821
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.821
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.821
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.819
L893_g6878 Steinernema glaseri L893_g6878 I 0.811
Bm3989 Brugia malayi Bm3989 I 0.789
Sakowv30008100m.g Saccoglossus kowalevskii Sakowv30008100m.g I 0.788
Minc15420 Meloidogyne incognita Minc15420 I 0.776
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.776
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.770
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.766
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.766
L898_g4801 Steinernema monticolum L898_g4801 I 0.766
L889_g29204 Steinernema feltiae L889_g29204 I 0.766
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.766
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.766
SPU_021289 Strongylocentrotus purpuratus SPU_021289 I 0.759
PPA21285 Pristionchus pacificus PPA21285 I 0.757
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.757
AMEC013916 Anopheles melas AMEC013916 I 0.752
AARA006848 Anopheles arabiensis AARA006848 I 0.752
ACUA020556 Anopheles culicifacies ACUA020556 I 0.752
ADIR003190 Anopheles dirus ADIR003190 I 0.752
AEPI005174 Anopheles epiroticus AEPI005174 I 0.752
AALB002625 Anopheles albimanus AALB002625 I 0.752
USP Anopheles gambiae AGAP002095 I 0.752
L798_09225 Zootermopsis nevadensis L798_09225 I 0.752
TC014027 Tribolium castaneum TC014027 I 0.752
CPIJ016024 Culex quinquefasciatus CPIJ016024 I 0.752
YQE_09004 Dendroctonus ponderosae YQE_09004 I 0.752
AFAF008350 Anopheles farauti AFAF008350 I 0.752
ACOM042234 Anopheles coluzzii ACOM042234 I 0.752
ASTEI00398 Anopheles stephensi ASTEI00398 I 0.752
ASIS007484 Anopheles sinensis ASIS007484 I 0.752
AFUN009463 Anopheles funestus AFUN009463 I 0.752
ACYPI005934 Acyrthosiphon pisum ACYPI005934 I 0.752
USP Aedes aegypti AAEL000395 I 0.752
AQUA008924 Anopheles quadriannulatus AQUA008924 I 0.752
ADAC008563 Anopheles darlingi ADAC008563 I 0.752
AMIN000644 Anopheles minimus AMIN000644 I 0.752
CpipJ_CPIJ016024 Culex pipiens CpipJ_CPIJ016024 I 0.752
AMEM008174 Anopheles merus AMEM008174 I 0.752
AMEC022423 Anopheles melas AMEC022423 I 0.752
GM18927 Drosophila sechellia FBgn0173830 I 0.748
GH24408 Drosophila grimshawi FBgn0131864 I 0.748
GL15129 Drosophila persimilis FBgn0152733 I 0.748
GI15428 Drosophila mojavensis FBgn0138177 I 0.748
GG12659 Drosophila erecta FBgn0104947 I 0.748
GA18146 Drosophila pseudoobscura FBgn0078154 I 0.748
GK25746 Drosophila willistoni FBgn0227705 I 0.748
BGIBMGA006183 Bombyx mori BGIBMGA006183 I 0.748
usp Drosophila melanogaster FBgn0003964 D 0.748
GF21986 Drosophila ananassae FBgn0098985 I 0.748
MESCA000610 Megaselia scalaris MESCA000610 I 0.748
tetur31g01930 Tetranychus urticae tetur31g01930 I 0.748
tetur01g09240 Tetranychus urticae tetur01g09240 I 0.748
LCUP004818 Lucilia cuprina LCUP004818 I 0.748
LLOJ005938 Lutzomyia longipalpis LLOJ005938 I 0.748
ASU_13270 Ascaris suum ASU_13270 I 0.748
MDOA006432 Musca domestica MDOA006432 I 0.748
ASIM_0001060801 Anisakis simplex ASIM_0001060801 I 0.748
MCINX011950 Melitaea cinxia MCINX011950 I 0.748
ISCW005340 Ixodes scapularis ISCW005340 I 0.748
HMEL005004 Heliconius melpomene HMEL005004 I 0.748
KGM_05745 Danaus plexippus KGM_05745 I 0.748
GE16988 Drosophila yakuba FBgn0234474 I 0.748
GB42692 Apis mellifera GB42692 I 0.748
PPARA Tupaia belangeri ENSTBEG00000017305 I 0.746
LotgiG68173 Lottia gigantea LotgiG68173 I 0.746
SMUV_0000987101 Syphacia muris SMUV_0000987101 I 0.745