CRE25188 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE25188 T302277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr83
M06434_2.00 		Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY		 B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436 		0.806 0.614
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.753 0.614
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.753 0.614
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.753 0.614
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.753 0.614
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.753 0.614
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.753 0.614
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.753 0.614
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.753 0.614
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.753 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE25188 Nuclear receptor 22 92

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG09846 Caenorhabditis briggsae CBG09846 I 0.995
CBN10661 Caenorhabditis brenneri CBN10661 I 0.991
nhr-239 Caenorhabditis elegans WBGene00021848 I 0.989
HPLM_0002159101 Haemonchus placei HPLM_0002159101 I 0.985
tetur01g07700 Tetranychus urticae tetur01g07700 I 0.984
LotgiG132791 Lottia gigantea LotgiG132791 I 0.982
SMAR006023 Strigamia maritima SMAR006023 I 0.981
L892_g29081 Steinernema scapterisci L892_g29081 N 0.980
L889_g32531 Steinernema feltiae L889_g32531 I 0.980
L596_g19535 Steinernema carpocapsae L596_g19535 N 0.980
SPU_012586 Strongylocentrotus purpuratus SPU_012586 I 0.979
ACYPI48102 Acyrthosiphon pisum ACYPI48102 I 0.973
Ocbimv22005486m.g Octopus bimaculoides Ocbimv22005486m.g I 0.972
ACOC_0001282001 Angiostrongylus costaricensis ACOC_0001282001 I 0.971
ACAC_0001082701 Angiostrongylus cantonensis ACAC_0001082701 I 0.971
ISCW008659 Ixodes scapularis ISCW008659 I 0.970
HelroG148423 Helobdella robusta HelroG148423 I 0.969
Sakowv30002570m.g Saccoglossus kowalevskii Sakowv30002570m.g I 0.968
NV10871 Nasonia vitripennis NV10871 I 0.966
RSKR_0000433000 Rhabditophanes kr3021 RSKR_0000433000 I 0.964
SMUV_0000977701 Syphacia muris SMUV_0000977701 N 0.962
BXY_1663900 Bursaphelenchus xylophilus BXY_1663900 N 0.958
SSTP_0000371600 Strongyloides stercoralis SSTP_0000371600 N 0.952
PTRK_0000986400 Parastrongyloides trichosuri PTRK_0000986400 N 0.952
SPAL_0001030000 Strongyloides papillosus SPAL_0001030000 N 0.952
L798_08383 Zootermopsis nevadensis L798_08383 I 0.948
SVE_0494600 Strongyloides venezuelensis SVE_0494600 N 0.939
CapteG177303 Capitella teleta CapteG177303 I 0.932
TC010460 Tribolium castaneum TC010460 I 0.922
Hsal_03084--XP_001121181.1_APIME Harpegnathos saltator Hsal_03084--XP_001121181.1_APIME I 0.910
GE10213 Drosophila yakuba FBgn0228087 I 0.809
ASTEI03427 Anopheles stephensi ASTEI03427 I 0.808
AMAM005986 Anopheles maculatus AMAM005986 I 0.808
GG13368 Drosophila erecta FBgn0105640 I 0.806
Hr83 Drosophila melanogaster FBgn0037436 D 0.806
GM10889 Drosophila sechellia FBgn0165835 I 0.806
GD19868 Drosophila simulans FBgn0191357 I 0.806
AATE004130 Anopheles atroparvus AATE004130 I 0.805
AALB009657 Anopheles albimanus AALB009657 I 0.803
CpipJ_CPIJ015933 Culex pipiens CpipJ_CPIJ015933 I 0.802
AMIN000835 Anopheles minimus AMIN000835 I 0.802
GF16659 Drosophila ananassae FBgn0093680 I 0.802
CPIJ015933 Culex quinquefasciatus CPIJ015933 I 0.802
AQUA004261 Anopheles quadriannulatus AQUA004261 I 0.800
AMEM012481 Anopheles merus AMEM012481 I 0.800
AMEC011506 Anopheles melas AMEC011506 I 0.800
AEPI004731 Anopheles epiroticus AEPI004731 I 0.800
AARA006703 Anopheles arabiensis AARA006703 I 0.800
AGAP002234 Anopheles gambiae AGAP002234 I 0.800
GI24589 Drosophila mojavensis FBgn0147311 I 0.799
AFUN005541 Anopheles funestus AFUN005541 I 0.798
HR83 Aedes aegypti AAEL007350 I 0.796
PPAI010314 Phlebotomus papatasi PPAI010314 I 0.781
LCUP007875 Lucilia cuprina LCUP007875 I 0.776
MDOA009347 Musca domestica MDOA009347 I 0.776
GJ22654 Drosophila virilis FBgn0209758 I 0.772
LLOJ000718 Lutzomyia longipalpis LLOJ000718 I 0.769
LLOJ001302 Lutzomyia longipalpis LLOJ001302 I 0.769
GH18089 Drosophila grimshawi FBgn0125557 I 0.757
HelroG81672 Helobdella robusta HelroG81672 I 0.754
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.753
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.753
NR2E1 Bos taurus ENSBTAG00000013991 I 0.753
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.753
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.753
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.753
NR2E1 Felis catus ENSFCAG00000002255 I 0.753
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.753
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.753
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.753
NR2E1 Equus caballus ENSECAG00000018990 I 0.753
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.753
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.753
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.753
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.753
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.753
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.753
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.753
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.753
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.753
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.753
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.753
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.753
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.753
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.753
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.753
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.753
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.753
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.753
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.753
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.753
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.753
NR2E1 Sorex araneus ENSSARG00000013555 I 0.753
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.753
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.753
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.753
Aan_R007044 Calypte anna Aan_R007044 I 0.753
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.753
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.753
NR2E1 Homo sapiens ENSG00000112333 D 0.753
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.753
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.753
NR2E1 Gallus gallus ENSGALG00000015305 I 0.753
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.753
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.753
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.753
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.753
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.753
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.753
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.749
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.749