EFV56045 (Trichinella spiralis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 EFV56045 T302359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.978 0.886
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.978 0.886
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.975 0.800
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.975 0.800
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.975 0.800
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.975 0.786
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.971 0.786
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.966 0.786
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.960 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV56045 Nuclear receptor 127 197

Links

Other Nuclear receptor family TFs
Other Trichinella spiralis TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_05007 Trichinella nativa D917_05007 I 0.988
D918_07443 Trichuris suis D918_07443 I 0.986
TTRE_0000600201 Trichuris trichiura TTRE_0000600201 I 0.986
GPLIN_000669800 Globodera pallida GPLIN_000669800 I 0.981
ENSPFOG00000006516 Poecilia formosa ENSPFOG00000006516 I 0.980
ENSXMAG00000015842 Xiphophorus maculatus ENSXMAG00000015842 I 0.980
DAPPUDRAFT_106791 Daphnia pulex DAPPUDRAFT_106791 I 0.980
nr2e3 Oryzias latipes ENSORLG00000007175 I 0.980
SBAD_0000006401 Soboliphyme baturini SBAD_0000006401 I 0.980
WBGene00240517 Onchocerca volvulus WBGene00240517 I 0.979
fax-1 Caenorhabditis elegans WBGene00001400 I 0.979
Hba_15323 Heterorhabditis bacteriophora Hba_15323 I 0.979
HCOI01781300 Haemonchus contortus HCOI01781300 I 0.979
TCNE_0001716001 Toxocara canis TCNE_0001716001 I 0.979
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.979
DICVIV_11193 Dictyocaulus viviparus DICVIV_11193 I 0.979
AALB001133 Anopheles albimanus AALB001133 I 0.979
ANCCAN_05510 Ancylostoma caninum ANCCAN_05510 I 0.979
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.979
LOAG_06205 Loa loa LOAG_06205 I 0.979
nOo.2.0.1.g10097 Onchocerca ochengi nOo.2.0.1.g10097 I 0.979
nOo.2.0.1.g01040 Onchocerca ochengi nOo.2.0.1.g01040 I 0.979
AMEM000983 Anopheles merus AMEM000983 I 0.979
nOo.2.0.1.g11611 Onchocerca ochengi nOo.2.0.1.g11611 I 0.979
nLs.2.1.2.g01701 Litomosoides sigmodontis nLs.2.1.2.g01701 I 0.979
AAEL007190 Aedes aegypti AAEL007190 I 0.979
OFLC_0000991001 Onchocerca flexuosa OFLC_0000991001 I 0.979
HelroG139475 Helobdella robusta HelroG139475 I 0.979
ADAC006988 Anopheles darlingi ADAC006988 I 0.979
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.979
ASU_07884 Ascaris suum ASU_07884 I 0.979
Bm4485 Brugia malayi Bm4485 I 0.979
AARA003887 Anopheles arabiensis AARA003887 I 0.979
AEPI011067 Anopheles epiroticus AEPI011067 I 0.979
BXY_0327700 Bursaphelenchus xylophilus BXY_0327700 I 0.979
BTMF_0001091401 Brugia timori BTMF_0001091401 I 0.979
CRE00427 Caenorhabditis remanei CRE00427 I 0.979
SPAL_0001117000 Strongyloides papillosus SPAL_0001117000 I 0.979
CBG14155 Caenorhabditis briggsae CBG14155 I 0.979
SVE_0933400 Strongyloides venezuelensis SVE_0933400 I 0.979
CBN22518 Caenorhabditis brenneri CBN22518 I 0.979
ANCCEY_01724 Ancylostoma ceylanicum ANCCEY_01724 I 0.979
CJA07370 Caenorhabditis japonica CJA07370 I 0.979
SSTP_0000090600 Strongyloides stercoralis SSTP_0000090600 I 0.979
CGOC_0000187501 Cylicostephanus goldi CGOC_0000187501 I 0.979
AFAF011447 Anopheles farauti AFAF011447 I 0.979
ACOM026748 Anopheles coluzzii ACOM026748 I 0.979
AATE003142 Anopheles atroparvus AATE003142 I 0.979
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.978
SMU15038222 Schmidtea mediterranea SMU15038222 I 0.978
SMU15029049 Schmidtea mediterranea SMU15029049 I 0.978
GB49738 Apis mellifera GB49738 I 0.978
GE13645 Drosophila yakuba FBgn0231304 I 0.978
ECPE_0000243601 Echinostoma caproni ECPE_0000243601 I 0.978
nr2e3 Xenopus tropicalis XB-GENE-485801 I 0.978
GL17752 Drosophila persimilis FBgn0155355 I 0.978
GI19610 Drosophila mojavensis FBgn0142347 I 0.978
GD11109 Drosophila simulans FBgn0182865 I 0.978
GJ14974 Drosophila virilis FBgn0202177 I 0.978
GK20892 Drosophila willistoni FBgn0222886 I 0.978
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.978
GH20426 Drosophila grimshawi FBgn0127889 I 0.978
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.978
TC009378 Tribolium castaneum TC009378 I 0.978
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.978
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.978
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.978
MDOA010244 Musca domestica MDOA010244 I 0.978
RPRC002557 Rhodnius prolixus RPRC002557 I 0.978
LotgiG137595 Lottia gigantea LotgiG137595 I 0.978
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.978
NV14480 Nasonia vitripennis NV14480 I 0.978
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.978
PHUM039420 Pediculus humanus PHUM039420 I 0.978
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.978
Hr51 Drosophila melanogaster FBgn0034012 D 0.978
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.978
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.978
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.978
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.978
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.978
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.978
GF13031 Drosophila ananassae FBgn0090064 I 0.978
nr2e3 Danio rerio ENSDARG00000045904 I 0.978
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.978
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.978
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.978
CapteG171557 Capitella teleta CapteG171557 I 0.978
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.978
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.978
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.978
TCLT_0000456401 Thelazia callipaeda TCLT_0000456401 I 0.977
RSKR_0000698500 Rhabditophanes kr3021 RSKR_0000698500 I 0.977
nAv.1.0.1.g01891 Acanthocheilonema viteae nAv.1.0.1.g01891 I 0.977
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.976
NR2E3 Gallus gallus ENSGALG00000002093 I 0.976
Aan_R004022 Calypte anna Aan_R004022 I 0.976
tetur01g11040 Tetranychus urticae tetur01g11040 I 0.976
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.976
Sakowv30007027m.g Saccoglossus kowalevskii Sakowv30007027m.g I 0.976
genemark-nMf.1.1.scaf00188-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00188-processed-gene-0.4 I 0.976
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.976
scaffold296-EXSNAP2012.8 Pristionchus exspectatus scaffold296-EXSNAP2012.8 I 0.976
L596_g2163 Steinernema carpocapsae L596_g2163 I 0.976
MhA1_Contig1792.frz3.gene6 Meloidogyne hapla MhA1_Contig1792.frz3.gene6 I 0.976
L898_g15355 Steinernema monticolum L898_g15355 I 0.976
Ppa-fax-1 Pristionchus pacificus PPA00264 I 0.976
L798_02234 Zootermopsis nevadensis L798_02234 I 0.976
nDi.2.2.2.g10236 Dirofilaria immitis nDi.2.2.2.g10236 I 0.976
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.976
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.976
SMUV_0000245701 Syphacia muris SMUV_0000245701 I 0.976
SPU_014405 Strongylocentrotus purpuratus SPU_014405 I 0.976
L893_g28297 Steinernema glaseri L893_g28297 I 0.976
PTRK_0000446300 Parastrongyloides trichosuri PTRK_0000446300 I 0.976
L892_g9366 Steinernema scapterisci L892_g9366 I 0.976
L889_g11978 Steinernema feltiae L889_g11978 I 0.976
NR2E3 Homo sapiens ENSG00000278570 D 0.975
TRE_0000223201 Trichobilharzia regenti TRE_0000223201 I 0.975
csin100859 Clonorchis sinensis csin100859 I 0.975
NR2E3 Callithrix jacchus ENSCJAG00000018552 I 0.975
NR2E3 Cavia porcellus ENSCPOG00000008974 I 0.975
ENSCSAG00000013721 Chlorocebus sabaeus ENSCSAG00000013721 I 0.975
NR2E3 Equus caballus ENSECAG00000015192 I 0.975
NR2E3 Bos taurus ENSBTAG00000014236 I 0.975
NR2E3 Felis catus ENSFCAG00000031082 I 0.975
ENSMPUG00000017103 Mustela putorius furo ENSMPUG00000017103 I 0.975
NR2E3 Procavia capensis ENSPCAG00000014733 I 0.975
ENSPANG00000016257 Papio anubis ENSPANG00000016257 I 0.975
NR2E3 Ochotona princeps ENSOPRG00000006427 I 0.975
NR2E3 Pan troglodytes ENSPTRG00000007242 I 0.975
NR2E3 Pteropus vampyrus ENSPVAG00000009088 I 0.975
NR2E3 Tursiops truncatus ENSTTRG00000009410 I 0.975
ENSSTOG00000012080 Ictidomys tridecemlineatus ENSSTOG00000012080 I 0.975
Nr2e3 Rattus norvegicus ENSRNOG00000050690 I 0.975
NR2E3 Gorilla gorilla ENSGGOG00000004383 I 0.975
NR2E3 Otolemur garnettii ENSOGAG00000006128 I 0.975
NR2E3 Macaca mulatta ENSMMUG00000019276 I 0.975
ENSBTAP00000048604-D1 Bos grunniens ENSBTAP00000048604-D1 I 0.975
NR2E3 Myotis lucifugus ENSMLUG00000008408 I 0.975
ENSOARG00000018808 Ovis aries ENSOARG00000018808 I 0.975
Nr2e3 Mus musculus ENSMUSG00000032292 D 0.975
ENSNLEG00000013807 Nomascus leucogenys ENSNLEG00000013807 I 0.975
EVEC_0000564801 Enterobius vermicularis EVEC_0000564801 I 0.975
Myotis_brandtii_NR2E3_10027281 Myotis brandtii Myotis_brandtii_NR2E3_10027281 I 0.975
SMTD_0001566201 Schistosoma mattheei SMTD_0001566201 I 0.974
SMRZ_0000841101 Schistosoma margrebowiei SMRZ_0000841101 I 0.974
Smp_167770 Schistosoma mansoni Smp_167770 I 0.974
ENSONIG00000015396 Oreochromis niloticus ENSONIG00000015396 I 0.974
NR2E3 Sus scrofa ENSSSCG00000004978 I 0.973
ENSPMAG00000009792 Petromyzon marinus ENSPMAG00000009792 I 0.973
NR2E3 Tupaia belangeri ENSTBEG00000011672 I 0.972
nr2e3 Gasterosteus aculeatus ENSGACG00000004739 I 0.972
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.970
NR2E3 Tetraodon nigroviridis ENSTNIG00000005150 I 0.948
ENSAMEG00000008835 Ailuropoda melanoleuca ENSAMEG00000008835 I 0.942
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 I 0.925
SMAR005628 Strigamia maritima SMAR005628 I 0.921
WUBG_05086 Wuchereria bancrofti WUBG_05086 I 0.827
TELCIR_21617 Teladorsagia circumcincta TELCIR_21617 I 0.827
OESDEN_00114 Oesophagostomum dentatum OESDEN_00114 I 0.816
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.803
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.803
SMAR006008 Strigamia maritima SMAR006008 I 0.803
ISCW019467 Ixodes scapularis ISCW019467 I 0.790
PHUM331460 Pediculus humanus PHUM331460 I 0.789
HHAL007294-PA Halyomorpha halys HHAL007294-PA I 0.786
ISCW010891 Ixodes scapularis ISCW010891 I 0.785
RPRC007025 Rhodnius prolixus RPRC007025 I 0.779
CGI_10028920 Crassostrea gigas CGI_10028920 I 0.776
LotgiG130367 Lottia gigantea LotgiG130367 I 0.776
EFV59616 Trichinella spiralis EFV59616 I 0.774
D917_09121 Trichinella nativa D917_09121 I 0.774
DAPPUDRAFT_299738 Daphnia pulex DAPPUDRAFT_299738 I 0.771
tetur08g01210 Tetranychus urticae tetur08g01210 I 0.770
NR2E3 Meleagris gallopavo ENSMGAG00000001449 I 0.769
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.767
CapteG226190 Capitella teleta CapteG226190 I 0.762
AAEL003020 Aedes aegypti AAEL003020 I 0.760
AMEM005434 Anopheles merus AMEM005434 I 0.760
AMAM000431 Anopheles maculatus AMAM000431 I 0.760
AMEC019536 Anopheles melas AMEC019536 I 0.760
AQUA002816 Anopheles quadriannulatus AQUA002816 I 0.760
AGAP000819 Anopheles gambiae AGAP000819 I 0.760
ADAC006907 Anopheles darlingi ADAC006907 I 0.760
AFUN007550 Anopheles funestus AFUN007550 I 0.760
ASIS014807 Anopheles sinensis ASIS014807 I 0.760
CPIJ012467 Culex quinquefasciatus CPIJ012467 I 0.760
ASTEI01071 Anopheles stephensi ASTEI01071 I 0.760
AFAF018214 Anopheles farauti AFAF018214 I 0.760
AATE006814 Anopheles atroparvus AATE006814 I 0.760
AARA002508 Anopheles arabiensis AARA002508 I 0.760
AALB003284 Anopheles albimanus AALB003284 I 0.760
AMIN005547 Anopheles minimus AMIN005547 I 0.760
CpipJ_CPIJ012467 Culex pipiens CpipJ_CPIJ012467 I 0.760
ACOM036097 Anopheles coluzzii ACOM036097 I 0.760
ACUA015273 Anopheles culicifacies ACUA015273 I 0.760
AEPI011017 Anopheles epiroticus AEPI011017 I 0.760
ADIR001527 Anopheles dirus ADIR001527 I 0.753
Cflo_06716--XP_001121187.1_APIME Camponotus floridanus Cflo_06716--XP_001121187.1_APIME I 0.751
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.751
GB50436 Apis mellifera GB50436 I 0.751
Hsal_06558--XP_001121187.1_APIME Harpegnathos saltator Hsal_06558--XP_001121187.1_APIME I 0.751
ASU_00971 Ascaris suum ASU_00971 I 0.751