ENSCSAVG00000007313 (Ciona savignyi)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSCSAVG00000007313 T302841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EcR
M06414_2.00
Drosophila melanogaster
RAGGTCAW

WTGACCTY
B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546
0.851 0.745
NR1H4
M00368_2.00
Homo sapiens
NVRGGTCANN

NNTGACCYBN
PBM
Barrera et al.(2016)
NR1H4_REF
0.828 0.764
NR1H4
M05876_2.00
Homo sapiens
DRGKTCAHHKD

HMDDTGAMCYH
SMiLE-seq
Isakova et al.(2017)
NR1H4
0.828 0.764
NR1H4
M08152_2.00
Homo sapiens
NNGGTCATTNN

NNAATGACCNN
ChIP-seq
Mathelier et al.(2014)
MA1110.1
0.828 0.764
NR1H4
M09263_2.00
Homo sapiens
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B
0.828 0.764
Nr1h4
M09332_2.00
Mus musculus
CCBVNVGGYCRBTGMCCYB

VRGGKCAVYGRCCBNBVGG
Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A
0.828 0.764
Nr1h4
M09618_2.00
Mus musculus
NRGGBCANTGVCCY

RGGBCANTGVCCYN
Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al.
0.828 0.764
NR1H4
M11086_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q2
0.828 0.764
NR1H4
M11087_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q3
0.828 0.764
NR1H4
M11088_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXR_Q5
0.828 0.764
NR1H4
M11089_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRRXR_Q5
0.828 0.764
NR1H4
M00367_2.00
Homo sapiens
NNNTWTTATDHNN

NNDHATAAWANNN
PBM
Barrera et al.(2016)
NR1H4_C144R
0.828 0.745
nr1h5.S
M11194_2.00
Xenopus laevis Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FXRIR1_Q6
0.778 0.782
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000012456 Nuclear receptor 1 24
ENSCSAVP00000012457 Nuclear receptor 199 254

Links

Other Nuclear receptor family TFs
Other Ciona savignyi TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ECR Aedes aegypti AAEL009600 I 0.851
AALB010791 Anopheles albimanus AALB010791 I 0.851
Aan_R006662 Calypte anna Aan_R006662 I 0.778
Aan_R010496 Calypte anna Aan_R010496 I 0.778
AARA003299 Anopheles arabiensis AARA003299 I 0.851
AATE015478 Anopheles atroparvus AATE015478 I 0.851
ACOC_0001278301 Angiostrongylus costaricensis ACOC_0001278301 I 0.789
ACOM026429 Anopheles coluzzii ACOM026429 I 0.851
ACUA000806 Anopheles culicifacies ACUA000806 I 0.851
ACYPI001692 Acyrthosiphon pisum ACYPI001692 I 0.868
ADAC008672 Anopheles darlingi ADAC008672 I 0.851
ADIR001886 Anopheles dirus ADIR001886 I 0.851
AEPI000843 Anopheles epiroticus AEPI000843 I 0.851
AFAF021556 Anopheles farauti AFAF021556 I 0.851
Afo_R001939 Aptenodytes forsteri Afo_R001939 I 0.778
Afo_R012936 Aptenodytes forsteri Afo_R012936 I 0.778
AFUN015736 Anopheles funestus AFUN015736 I 0.851
AGAP012211 Anopheles gambiae AGAP012211 I 0.851
Alligator_sinensis_CCG004779.1 Alligator sinensis Alligator_sinensis_CCG004779.1 I 0.778
AMEM018998 Anopheles merus AMEM018998 I 0.851
AMIN006955 Anopheles minimus AMIN006955 I 0.851
ANCCAN_11234 Ancylostoma caninum ANCCAN_11234 I 0.789
AQUA002870 Anopheles quadriannulatus AQUA002870 I 0.851
ASTEI02489 Anopheles stephensi ASTEI02489 I 0.851
ASU_11275 Ascaris suum ASU_11275 I 0.823
BGIBMGA006767 Bombyx mori BGIBMGA006767 I 0.851
BGLB013636 Biomphalaria glabrata BGLB013636 I 0.859
Bm2982 Brugia malayi Bm2982 I 0.823
Brh_R011463 Buceros rhinoceros Brh_R011463 I 0.778
Brh_R011894 Buceros rhinoceros Brh_R011894 I 0.778
BTMF_0001180601 Brugia timori BTMF_0001180601 I 0.823
CapteG125155 Capitella teleta CapteG125155 I 0.764
CGI_10007606 Crassostrea gigas CGI_10007606 I 0.859
CLEC002129 Cimex lectularius CLEC002129 I 0.872
Cmyd_10004101 Chelonia mydas Cmyd_10004101 I 0.778
Cmyd_10021697 Chelonia mydas Cmyd_10021697 I 0.778
CPIJ002963 Culex quinquefasciatus CPIJ002963 I 0.851
CpipJ_CPIJ002963 Culex pipiens CpipJ_CPIJ002963 I 0.851
D917_00700 Trichinella nativa D917_00700 I 0.838
D918_02615 Trichuris suis D918_02615 I 0.838
DAPPUDRAFT_319648 Daphnia pulex DAPPUDRAFT_319648 I 0.867
DICVIV_05958 Dictyocaulus viviparus DICVIV_05958 I 0.823
DME_0000391501 Dracunculus medinensis DME_0000391501 I 0.823
EEL_0000192101 Elaeophora elaphi EEL_0000192101 I 0.823
EFV58098 Trichinella spiralis EFV58098 I 0.838
ENSACAG00000003336 Anolis carolinensis ENSACAG00000003336 I 0.778
NR1H4 Anolis carolinensis ENSACAG00000012333 I 0.778
ENSAMEG00000015232 Ailuropoda melanoleuca ENSAMEG00000015232 I 0.828
ENSAMEG00000017106 Ailuropoda melanoleuca ENSAMEG00000017106 I 0.778
ENSAMXG00000012228 Astyanax mexicanus ENSAMXG00000012228 I 0.827
ENSAMXG00000020274 Astyanax mexicanus ENSAMXG00000020274 I 0.778
ENSAPLG00000008338 Anas platyrhynchos ENSAPLG00000008338 I 0.778
ENSAPLG00000013289 Anas platyrhynchos ENSAPLG00000013289 I 0.778
NR1H4 Bos taurus ENSBTAG00000013596 I 0.828
ENSBTAP00000018079-D1 Bos grunniens ENSBTAP00000018079-D1 I 0.828
NR1H4 Canis familiaris ENSCAFG00000006835 I 0.828
ENSCAFG00000009671 Canis familiaris ENSCAFG00000009671 I 0.778
NR1H4 Choloepus hoffmanni ENSCHOG00000013215 I 0.828
ENSCING00000003634 Ciona intestinalis ENSCING00000003634 N 0.105
NR1H4 Callithrix jacchus ENSCJAG00000002087 I 0.828
NR1H4 Cavia porcellus ENSCPOG00000002168 I 0.828
ENSCSAG00000003451 Chlorocebus sabaeus ENSCSAG00000003451 I 0.828
nr1h5 Danio rerio ENSDARG00000031046 I 0.778
nr1h4 Danio rerio ENSDARG00000057741 I 0.778
ENSDNOG00000034800 Dasypus novemcinctus ENSDNOG00000034800 I 0.778
NR1H4 Dasypus novemcinctus ENSDNOG00000047912 I 0.828
Nr1h4 Dipodomys ordii ENSDORG00000001224 I 0.828
ENSECAG00000015617 Equus caballus ENSECAG00000015617 I 0.778
NR1H4 Equus caballus ENSECAG00000018166 I 0.828
NR1H4 Erinaceus europaeus ENSEEUG00000012218 I 0.829
NR1H4 Echinops telfairi ENSETEG00000019430 I 0.828
ENSFALG00000003389 Ficedula albicollis ENSFALG00000003389 I 0.778
ENSFALG00000011082 Ficedula albicollis ENSFALG00000011082 I 0.778
NR1H4 Felis catus ENSFCAG00000006469 I 0.828
ENSFCAG00000028538 Felis catus ENSFCAG00000028538 I 0.778
NR1H4 Homo sapiens ENSG00000012504 D 0.828
nr1h5 Gasterosteus aculeatus ENSGACG00000004938 I 0.778
nr1h4 Gasterosteus aculeatus ENSGACG00000011745 I 0.778
ENSGALG00000002170 Gallus gallus ENSGALG00000002170 I 0.778
NR1H4 Gallus gallus ENSGALG00000011594 I 0.778
NR1H4 Gorilla gorilla ENSGGOG00000008137 I 0.828
ENSGMOG00000003773 Gadus morhua ENSGMOG00000003773 I 0.778
ENSGMOG00000015966 Gadus morhua ENSGMOG00000015966 I 0.777
ENSLACG00000018478 Latimeria chalumnae ENSLACG00000018478 I 0.778
NR1H4 Loxodonta africana ENSLAFG00000009154 I 0.828
ENSLAFG00000028744 Loxodonta africana ENSLAFG00000028744 I 0.778
ENSLOCG00000010390 Lepisosteus oculatus ENSLOCG00000010390 I 0.777
ENSLOCG00000015206 Lepisosteus oculatus ENSLOCG00000015206 I 0.778
ENSMEUG00000009703 Macropus eugenii ENSMEUG00000009703 I 0.778
NR1H4 Meleagris gallopavo ENSMGAG00000011690 I 0.778
NR1H4 Microcebus murinus ENSMICG00000013522 I 0.828
NR1H4 Myotis lucifugus ENSMLUG00000009273 I 0.828
NR1H4 Macaca mulatta ENSMMUG00000003571 I 0.828
ENSMODG00000004721 Monodelphis domestica ENSMODG00000004721 I 0.778
NR1H4 Monodelphis domestica ENSMODG00000004996 I 0.778
ENSMPUG00000005775 Mustela putorius furo ENSMPUG00000005775 I 0.778
ENSMPUG00000011573 Mustela putorius furo ENSMPUG00000011573 I 0.828
Nr1h4 Mus musculus ENSMUSG00000047638 D 0.828
Nr1h5 Mus musculus ENSMUSG00000048938 I 0.778
ENSNLEG00000006093 Nomascus leucogenys ENSNLEG00000006093 I 0.828
ENSOANG00000004519 Ornithorhynchus anatinus ENSOANG00000004519 I 0.778
NR1H4 Ornithorhynchus anatinus ENSOANG00000005583 I 0.778
ENSOARG00000013901 Ovis aries ENSOARG00000013901 I 0.828
NR1H4 Oryctolagus cuniculus ENSOCUG00000007177 I 0.828
ENSOCUG00000023188 Oryctolagus cuniculus ENSOCUG00000023188 I 0.778
NR1H4 Otolemur garnettii ENSOGAG00000007874 I 0.828
ENSOGAG00000030317 Otolemur garnettii ENSOGAG00000030317 I 0.778
ENSONIG00000009252 Oreochromis niloticus ENSONIG00000009252 I 0.778
ENSONIG00000014678 Oreochromis niloticus ENSONIG00000014678 I 0.778
NR1H4 Ochotona princeps ENSOPRG00000010997 I 0.828
nr1h4 Oryzias latipes ENSORLG00000011270 I 0.778
ENSP00000188403 Macaca fascicularis ENSP00000188403 I 0.828
ENSPANG00000023009 Papio anubis ENSPANG00000023009 I 0.828
ENSPFOG00000016102 Poecilia formosa ENSPFOG00000016102 I 0.777
ENSPFOG00000016166 Poecilia formosa ENSPFOG00000016166 I 0.778
ENSPPYG00000004867 Pongo abelii ENSPPYG00000004867 I 0.828
ENSPSIG00000003828 Pelodiscus sinensis ENSPSIG00000003828 I 0.784
ENSPSIG00000005774 Pelodiscus sinensis ENSPSIG00000005774 I 0.778
NR1H4 Pan troglodytes ENSPTRG00000005345 I 0.828
NR1H4 Pteropus vampyrus ENSPVAG00000014680 I 0.828
Nr1h4 Rattus norvegicus ENSRNOG00000007197 I 0.828
Nr1h5 Rattus norvegicus ENSRNOG00000023073 I 0.778
NR1H4 Sorex araneus ENSSARG00000004689 I 0.828
ENSSHAG00000010518 Sarcophilus harrisii ENSSHAG00000010518 I 0.778
ENSSHAG00000012333 Sarcophilus harrisii ENSSHAG00000012333 I 0.778
NR1H4 Sus scrofa ENSSSCG00000000875 I 0.828
ENSSTOG00000011771 Ictidomys tridecemlineatus ENSSTOG00000011771 I 0.828
ENSSTOG00000027072 Ictidomys tridecemlineatus ENSSTOG00000027072 I 0.778
NR1H4 Tupaia belangeri ENSTBEG00000016715 I 0.828
ENSTGUG00000000964 Taeniopygia guttata ENSTGUG00000000964 I 0.778
NR1H4 Taeniopygia guttata ENSTGUG00000008977 I 0.778
nr1h5 Tetraodon nigroviridis ENSTNIG00000003487 I 0.777
nr1h5 Tetraodon nigroviridis ENSTNIG00000004195 I 0.777
nr1h4 Tetraodon nigroviridis ENSTNIG00000012144 I 0.779
nr1h4 Takifugu rubripes ENSTRUG00000007314 I 0.778
nr1h5 Takifugu rubripes ENSTRUG00000008191 I 0.778
NR1H4 Tursiops truncatus ENSTTRG00000016373 I 0.828
ENSXMAG00000001433 Xiphophorus maculatus ENSXMAG00000001433 I 0.778
ENSXMAG00000012678 Xiphophorus maculatus ENSXMAG00000012678 I 0.777
estExt_fgenesh2_pg.C_2910013 Branchiostoma floridae estExt_fgenesh2_pg.C_2910013 I 0.758
e_gw.91.225.1 Branchiostoma floridae e_gw.91.225.1 I 0.859
e_gw.91.63.1 Branchiostoma floridae e_gw.91.63.1 I 0.859
EcR Drosophila melanogaster FBgn0000546 D 0.851
GF13818 Drosophila ananassae FBgn0090845 I 0.851
GG10830 Drosophila erecta FBgn0103135 I 0.853
GH20948 Drosophila grimshawi FBgn0128410 I 0.853
GI21285 Drosophila mojavensis FBgn0144015 I 0.853
GL16258 Drosophila persimilis FBgn0153862 I 0.851
GM16480 Drosophila sechellia FBgn0171395 I 0.851
GD10334 Drosophila simulans FBgn0182106 I 0.851
GJ20887 Drosophila virilis FBgn0208023 I 0.853
GK21996 Drosophila willistoni FBgn0223981 I 0.851
GE19426 Drosophila yakuba FBgn0236769 I 0.851
EcR Drosophila pseudoobscura FBgn0243551 I 0.851
GA24101 Drosophila pseudoobscura FBgn0245500 I 0.851
GB48059 Apis mellifera GB48059 I 0.868
Gfo_R005191 Geospiza fortis Gfo_R005191 I 0.778
Gfo_R010069 Geospiza fortis Gfo_R010069 I 0.778
GPUH_0000103801 Gongylonema pulchrum GPUH_0000103801 I 0.823
gw.2854.3.1 Branchiostoma floridae gw.2854.3.1 I 0.758
HCOI00433800 Haemonchus contortus HCOI00433800 I 0.789
HCOI00910600 Haemonchus contortus HCOI00910600 I 0.789
HMEL012265 Heliconius melpomene HMEL012265 I 0.851
ISCW003147 Ixodes scapularis ISCW003147 I 0.868
KGM_08219 Danaus plexippus KGM_08219 I 0.851
L596_g17693 Steinernema carpocapsae L596_g17693 I 0.822
L798_01568 Zootermopsis nevadensis L798_01568 I 0.868
L889_g17804 Steinernema feltiae L889_g17804 I 0.822
L892_g24092 Steinernema scapterisci L892_g24092 I 0.822
L893_g6815 Steinernema glaseri L893_g6815 I 0.822
L898_g14201 Steinernema monticolum L898_g14201 I 0.822
LCUP007589 Lucilia cuprina LCUP007589 I 0.851
LDEC009466 Leptinotarsa decemlineata LDEC009466 I 0.868
LOAG_16842 Loa loa LOAG_16842 I 0.823
LotgiG170342 Lottia gigantea LotgiG170342 I 0.852
MDOA013387 Musca domestica MDOA013387 I 0.851
Myotis_brandtii_NR1H4_10025557 Myotis brandtii Myotis_brandtii_NR1H4_10025557 I 0.828
nAv.1.0.1.g02667 Acanthocheilonema viteae nAv.1.0.1.g02667 I 0.823
NBR_0001980401 Nippostrongylus brasiliensis NBR_0001980401 I 0.788
NECAME_11142 Necator americanus NECAME_11142 I 0.789
nLs.2.1.2.g05295 Litomosoides sigmodontis nLs.2.1.2.g05295 I 0.823
nOo.2.0.1.g07306 Onchocerca ochengi nOo.2.0.1.g07306 I 0.823
nRc.2.0.1.g36086 Romanomermis culicivorax nRc.2.0.1.g36086 I 0.838
NV11088 Nasonia vitripennis NV11088 I 0.868
Ocbimv22026489m.g Octopus bimaculoides Ocbimv22026489m.g I 0.832
OFLC_0000511401 Onchocerca flexuosa OFLC_0000511401 I 0.823
Ogr07445 Ophisaurus gracilis Ogr07445 I 0.787
PHUM467460 Pediculus humanus PHUM467460 I 0.866
PPAI003337 Phlebotomus papatasi PPAI003337 I 0.849
Pvit_15387 Pogona vitticeps Pvit_15387 I 0.778
Pvit_18004 Pogona vitticeps Pvit_18004 I 0.778
RPRC014174 Rhodnius prolixus RPRC014174 I 0.868
Sakowv30016920m.g Saccoglossus kowalevskii Sakowv30016920m.g I 0.788
Sakowv30035171m.g Saccoglossus kowalevskii Sakowv30035171m.g I 0.788
SMAR011767 Strigamia maritima SMAR011767 I 0.868
SPU_011348 Strongylocentrotus purpuratus SPU_011348 I 0.794
Tal_R008756 Tyto alba Tal_R008756 I 0.778
Tal_R013008 Tyto alba Tal_R013008 I 0.778
TC012112 Tribolium castaneum TC012112 I 0.868
TCLT_0000569201 Thelazia callipaeda TCLT_0000569201 I 0.823
TCNE_0001577801 Toxocara canis TCNE_0001577801 I 0.823
TELCIR_16351 Teladorsagia circumcincta TELCIR_16351 I 0.788
tetur01g15140 Tetranychus urticae tetur01g15140 I 0.868
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.838
WBGene00245913 Onchocerca volvulus WBGene00245913 I 0.823
WUBG_00356 Wuchereria bancrofti WUBG_00356 I 0.823
nr1h5 Xenopus tropicalis XB-GENE-486722 I 0.778
nr1h5.S Xenopus laevis XB-GENE-6251607 D 0.778
nr1h5.L Xenopus laevis XB-GENE-864860 I 0.778