CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
esrrb
(
Danio rerio
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSDARG00000100847
T302909_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Esrrg
M00817_2.00
Mus musculus
VAAGGTCA
TGACCTTB
PBM
Weirauch et al.(2013)
pTH3841
0.953
0.929
ESRRB
M03367_2.00
Homo sapiens
TCAAGGTCAWH
DWTGACCTTGA
SELEX
Jolma et al.(2013)
ESRRB_1
0.953
0.929
ESRRG
M03412_2.00
Homo sapiens
AAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTT
SELEX
Jolma et al.(2013)
ESRRG_1
0.953
0.929
ESRRG
M03413_2.00
Homo sapiens
AAGGTCANHCAAGGTCA
TGACCTTGDNTGACCTT
SELEX
Jolma et al.(2013)
ESRRG_2
0.953
0.929
ESRRG
M03414_2.00
Homo sapiens
YSAAGGTCAH
DTGACCTTSR
SELEX
Jolma et al.(2013)
ESRRG_3
0.953
0.929
ESRRB
M05595_2.00
Homo sapiens
BBSAAGGTCRH
DYGACCTTSVV
SELEX
Yin et al.(2017)
ESRRB_eDBD_HT-SELEX
0.953
0.929
ESRRG
M05673_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_eDBD_HT-SELEX
0.953
0.929
ESRRG
M05675_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_FL_HT-SELEX
0.953
0.929
ESRRB
M09272_2.00
Homo sapiens
BCAAGGTCA
TGACCTTGV
Misc
Kulakovskiy et al.(2013)
ERR2_HUMAN.H11MO.0.A
0.953
0.929
ESRRG
M09296_2.00
Homo sapiens
TCAAGGTCA
TGACCTTGA
Misc
Kulakovskiy et al.(2013)
ERR3_HUMAN.H11MO.0.B
0.953
0.929
Esrrg
M09321_2.00
Mus musculus
BSAAGGWCAB
VTGWCCTTSV
Misc
Kulakovskiy et al.(2013)
ERR3_MOUSE.H11MO.0.C
0.953
0.929
ESRRB
M11129_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_01
0.953
0.929
ESRRB
M11130_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_Q2
0.953
0.929
ESRRB
M11131_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_Q3
0.953
0.929
ESRRG
M11185_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR3_Q2_01
0.953
0.929
ESRRG
M11186_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR3_Q2
0.953
0.929
ESRRB
M05596_2.00
Homo sapiens
NNSAAGGTCRH
DYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRB_eDBD_Methyl-HT-SELEX
0.953
0.929
ESRRG
M05674_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_eDBD_Methyl-HT-SELEX
0.953
0.929
ESRRG
M05676_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_FL_Methyl-HT-SELEX
0.953
0.929
Esrrb
M08034_2.00
Mus musculus
NNBYCAAGGTCANNB
VNNTGACCTTGRVNN
ChIP-seq
Chen et al.(2011)
SRP000217_Esrrb
0.953
0.914
Esrrb
M09312_2.00
Mus musculus
NHDBTCAAGGTCANNBN
NVNNTGACCTTGAVHDN
Misc
Kulakovskiy et al.(2013)
ERR2_MOUSE.H11MO.0.A
0.953
0.914
Esrra
M00183_2.00
Mus musculus
VAAGGTCAH
DTGACCTTB
PBM
Badis et al.(2009)
Esrra_2190
0.928
0.843
ESRRA
M03397_2.00
Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN
SELEX
Jolma et al.(2013)
ESRRA_1
0.928
0.843
ESRRA
M03398_2.00
Homo sapiens
AAGGTCAWHCAAGGTCA
TGACCTTGDWTGACCTT
SELEX
Jolma et al.(2013)
ESRRA_2
0.928
0.843
ESRRA
M03399_2.00
Homo sapiens
SAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTS
SELEX
Jolma et al.(2013)
ESRRA_3
0.928
0.843
ESRRA
M03400_2.00
Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN
SELEX
Jolma et al.(2013)
ESRRA_4
0.928
0.843
ESRRA
M03401_2.00
Homo sapiens
RAGGTCABNCAAGGTCA
TGACCTTGNVTGACCTY
SELEX
Jolma et al.(2013)
ESRRA_5
0.928
0.843
ESRRA
M03402_2.00
Homo sapiens
VAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTB
SELEX
Jolma et al.(2013)
ESRRA_6
0.928
0.843
Esrra
M03430_2.00
Mus musculus
DAGGTYAKTMAAGGTCA
TGACCTTKAMTRACCTH
SELEX
Jolma et al.(2013)
Esrra_1
0.928
0.843
Esrra
M03431_2.00
Mus musculus
KTCAAGGTCAT
ATGACCTTGAM
SELEX
Jolma et al.(2013)
Esrra_2
0.928
0.843
ESRRA
M05655_2.00
Homo sapiens
NNSAAGGTCAN
NTGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_eDBD_HT-SELEX
0.928
0.843
ESRRA
M05657_2.00
Homo sapiens
NNSAAGGTCAH
DTGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_FL_HT-SELEX
0.928
0.843
ESRRA
M07988_2.00
Homo sapiens
RGGKCASMNTGMCCY
RGGKCANKSTGMCCY
ChIP-seq
Gerstein et al.(2012)
ECC-1_ERALPHA_HudsonAlpha
0.928
0.843
ESRRA
M07989_2.00
Homo sapiens
NNRGGTCABNNTGHCCYNN
NNRGGDCANNVTGACCYNN
ChIP-seq
Gerstein et al.(2012)
T-47D_ERALPHA_HudsonAlpha
0.928
0.843
ESRRA
M09290_2.00
Homo sapiens
BYSAAGGTCANNNNN
NNNNNTGACCTTSRV
Misc
Kulakovskiy et al.(2013)
ERR1_HUMAN.H11MO.0.A
0.928
0.843
Esrra
M09319_2.00
Mus musculus
NNBYCAAGGTCA
TGACCTTGRVNN
Misc
Kulakovskiy et al.(2013)
ERR1_MOUSE.H11MO.0.A
0.928
0.843
ESRRA
M11168_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q2_01
0.928
0.843
ESRRA
M11169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q2
0.928
0.843
ESRRA
M11170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q3
0.928
0.843
ESRRA
M11171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESRRA_10
0.928
0.843
ESRRA
M05656_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_eDBD_Methyl-HT-SELEX
0.928
0.843
ESRRA
M05658_2.00
Homo sapiens
NBSAAGGTCRH
DYGACCTTSVN
SELEX
Yin et al.(2017)
ESRRA_FL_Methyl-HT-SELEX
0.928
0.843
ERR
M03941_2.00
Drosophila melanogaster
BSAAGGTCRH
DYGACCTTSV
SELEX
Nitta et al.(2015)
ERR_1
0.922
0.814
ERR
M06433_2.00
Drosophila melanogaster
MAAGGTCA
TGACCTTK
B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849
0.922
0.814
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000136509
Nuclear receptor
105
174
RLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKRHVGR
Links
Other
Nuclear receptor
family TFs
Other
Danio rerio
TFs
262 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy