Rorb (Dipodomys ordii)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSDORG00000008602 T302980_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.467 1.000
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.467 1.000
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.467 1.000
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.467 1.000
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.467 1.000
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.467 1.000
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.467 1.000
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.467 1.000
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.467 1.000
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.467 1.000
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.467 1.000
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.467 1.000
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.467 1.000
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.467 1.000
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.467 1.000
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.467 1.000
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.467 1.000
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.467 1.000
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.467 1.000
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.467 1.000
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.467 1.000
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.467 1.000
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.467 1.000
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.467 1.000
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.467 1.000
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.467 1.000
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.467 1.000
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000008074 Nuclear receptor 71 100

Links

Other Nuclear receptor family TFs
Other Dipodomys ordii TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RORA Pan troglodytes ENSPTRG00000007134 I 0.467
RORB Pan troglodytes ENSPTRG00000021025 I 0.467
RORC Pan troglodytes ENSPTRG00000032436 I 0.467
RORB Pteropus vampyrus ENSPVAG00000007216 I 0.467
ENSPSIG00000011314 Pelodiscus sinensis ENSPSIG00000011314 I 0.467
ENSPSIG00000005579 Pelodiscus sinensis ENSPSIG00000005579 I 0.467
ENSPMAG00000009286 Petromyzon marinus ENSPMAG00000009286 I 0.467
ENSPPYG00000000853 Pongo abelii ENSPPYG00000000853 I 0.467
ENSPPYG00000006528 Pongo abelii ENSPPYG00000006528 I 0.467
ENSPPYG00000019294 Pongo abelii ENSPPYG00000019294 I 0.467
RORC Pteropus vampyrus ENSPVAG00000008917 I 0.467
RORA Pteropus vampyrus ENSPVAG00000011408 I 0.467
ENSSHAG00000018693 Sarcophilus harrisii ENSSHAG00000018693 I 0.467
RORA Sus scrofa ENSSSCG00000004576 I 0.467
RORB Sus scrofa ENSSSCG00000005268 I 0.467
RORC Sus scrofa ENSSSCG00000026427 I 0.467
ENSSHAG00000015984 Sarcophilus harrisii ENSSHAG00000015984 I 0.467
ENSSHAG00000015734 Sarcophilus harrisii ENSSHAG00000015734 I 0.467
Rorb Rattus norvegicus ENSRNOG00000013413 I 0.467
Rorc Rattus norvegicus ENSRNOG00000020836 I 0.467
Rora Rattus norvegicus ENSRNOG00000027145 I 0.467
ENSSHAG00000002191 Sarcophilus harrisii ENSSHAG00000002191 I 0.467
ENSPFOG00000015704 Poecilia formosa ENSPFOG00000015704 I 0.467
ENSPFOG00000003699 Poecilia formosa ENSPFOG00000003699 I 0.467
ENSONIG00000010762 Oreochromis niloticus ENSONIG00000010762 I 0.467
ENSONIG00000015289 Oreochromis niloticus ENSONIG00000015289 I 0.467
ENSONIG00000015603 Oreochromis niloticus ENSONIG00000015603 I 0.467
RORA Ochotona princeps ENSOPRG00000012364 I 0.467
RORC Otolemur garnettii ENSOGAG00000024385 I 0.467
RORA Otolemur garnettii ENSOGAG00000007357 I 0.467
RORB Oryctolagus cuniculus ENSOCUG00000003732 I 0.467
RORA Oryctolagus cuniculus ENSOCUG00000012900 I 0.467
RORC Oryctolagus cuniculus ENSOCUG00000022907 I 0.467
RORB Otolemur garnettii ENSOGAG00000001523 I 0.467
RORB Ochotona princeps ENSOPRG00000016130 I 0.467
roraa Oryzias latipes ENSORLG00000007645 I 0.467
RORC Procavia capensis ENSPCAG00000005628 I 0.467
RORA Procavia capensis ENSPCAG00000006566 I 0.467
RORB Procavia capensis ENSPCAG00000012274 I 0.467
ENSPFOG00000000838 Poecilia formosa ENSPFOG00000000838 I 0.467
ENSPANG00000024927 Papio anubis ENSPANG00000024927 I 0.467
ENSPANG00000020758 Papio anubis ENSPANG00000020758 I 0.467
rorb Oryzias latipes ENSORLG00000012441 I 0.467
rorcb Oryzias latipes ENSORLG00000014886 N 0.467
ENSPANG00000017172 Papio anubis ENSPANG00000017172 I 0.467
ENSSTOG00000012400 Ictidomys tridecemlineatus ENSSTOG00000012400 I 0.467
ENSSTOG00000013264 Ictidomys tridecemlineatus ENSSTOG00000013264 I 0.467
ENSP00000261523 Macaca fascicularis ENSP00000261523 I 0.467
ENSP00000376461-D1 Bos grunniens ENSP00000376461-D1 I 0.467
ENSP00000376461 Macaca fascicularis ENSP00000376461 I 0.467
ENSP00000379507 Macaca fascicularis ENSP00000379507 I 0.467
ENSBTAP00000028921-D1 Bos grunniens ENSBTAP00000028921-D1 I 0.467
ENSBTAP00000021144-D1 Bos grunniens ENSBTAP00000021144-D1 I 0.467
Alligator_sinensis_CCG007724.1 Alligator sinensis Alligator_sinensis_CCG007724.1 I 0.467
Brh_R003242 Buceros rhinoceros Brh_R003242 I 0.467
Brh_R004006 Buceros rhinoceros Brh_R004006 I 0.467
Cmyd_10000975 Chelonia mydas Cmyd_10000975 I 0.467
Gfo_R008263 Geospiza fortis Gfo_R008263 I 0.467
Gfo_R008829 Geospiza fortis Gfo_R008829 I 0.467
gw.311.78.1 Branchiostoma floridae gw.311.78.1 I 0.467
rora Xenopus tropicalis XB-GENE-478535 I 0.467
rorb Xenopus tropicalis XB-GENE-484846 I 0.467
XP_002937524 Xenopus tropicalis XP_002937524 I 0.467
Tal_R010110 Tyto alba Tal_R010110 I 0.467
Pvit_17370 Pogona vitticeps Pvit_17370 I 0.467
Myotis_brandtii_RORA_10029423 Myotis brandtii Myotis_brandtii_RORA_10029423 I 0.467
Myotis_brandtii_RORB_10034418 Myotis brandtii Myotis_brandtii_RORB_10034418 I 0.467
Myotis_brandtii_RORC_10008053 Myotis brandtii Myotis_brandtii_RORC_10008053 I 0.467
Pvit_17369 Pogona vitticeps Pvit_17369 I 0.467
Afo_R006180 Aptenodytes forsteri Afo_R006180 I 0.467
Afo_R002975 Aptenodytes forsteri Afo_R002975 I 0.467
rorb Tetraodon nigroviridis ENSTNIG00000014682 D 0.467
ENSTRUG00000002901 Takifugu rubripes ENSTRUG00000002901 I 0.467
roraa Takifugu rubripes ENSTRUG00000010553 I 0.467
ENSTSYG00000001170 Tarsius syrichta ENSTSYG00000001170 I 0.467
roraa Tetraodon nigroviridis ENSTNIG00000008390 I 0.467
RORA Taeniopygia guttata ENSTGUG00000005333 I 0.467
ENSSTOG00000019386 Ictidomys tridecemlineatus ENSSTOG00000019386 I 0.467
RORA Tupaia belangeri ENSTBEG00000003065 I 0.467
RORB Tupaia belangeri ENSTBEG00000010761 I 0.467
RORB Taeniopygia guttata ENSTGUG00000000785 I 0.467
ENSTSYG00000007907 Tarsius syrichta ENSTSYG00000007907 I 0.467
ENSTSYG00000010455 Tarsius syrichta ENSTSYG00000010455 I 0.467
ENSXMAG00000015567 Xiphophorus maculatus ENSXMAG00000015567 I 0.467
ENSXMAG00000018442 Xiphophorus maculatus ENSXMAG00000018442 I 0.467
Aan_R009242 Calypte anna Aan_R009242 I 0.467
Aan_R015083 Calypte anna Aan_R015083 I 0.467
ENSXMAG00000003228 Xiphophorus maculatus ENSXMAG00000003228 I 0.467
RORA Vicugna pacos ENSVPAG00000007893 I 0.467
RORC Tursiops truncatus ENSTTRG00000003151 I 0.467
RORA Tursiops truncatus ENSTTRG00000007718 I 0.467
RORB Vicugna pacos ENSVPAG00000003390 I 0.467
ENSOARG00000021060 Ovis aries ENSOARG00000021060 I 0.467
ENSOARG00000020816 Ovis aries ENSOARG00000020816 I 0.467
RORA Dasypus novemcinctus ENSDNOG00000043276 I 0.467
Rora Dipodomys ordii ENSDORG00000001826 I 0.467
Rorc Dipodomys ordii ENSDORG00000015326 I 0.467
RORC Equus caballus ENSECAG00000000918 I 0.467
RORC Dasypus novemcinctus ENSDNOG00000033488 I 0.467
rorca Danio rerio ENSDARG00000057231 I 0.467
ENSCSAG00000012081 Chlorocebus sabaeus ENSCSAG00000012081 I 0.467
rorab Danio rerio ENSDARG00000001910 I 0.467
roraa Danio rerio ENSDARG00000031768 I 0.467
rorb Danio rerio ENSDARG00000033498 I 0.467
RORA Equus caballus ENSECAG00000016384 I 0.467
RORB Equus caballus ENSECAG00000024312 I 0.467
RORB Felis catus ENSFCAG00000011421 I 0.467
RORA Felis catus ENSFCAG00000013642 I 0.467
RORA Homo sapiens ENSG00000069667 D 0.467
RORC Homo sapiens ENSG00000143365 D 0.467
ENSFALG00000012763 Ficedula albicollis ENSFALG00000012763 I 0.467
ENSFALG00000012589 Ficedula albicollis ENSFALG00000012589 I 0.467
RORB Erinaceus europaeus ENSEEUG00000014274 I 0.467
RORA Erinaceus europaeus ENSEEUG00000015809 I 0.467
RORA Echinops telfairi ENSETEG00000001493 I 0.467
RORB Echinops telfairi ENSETEG00000017457 I 0.467
ENSCSAG00000008161 Chlorocebus sabaeus ENSCSAG00000008161 I 0.467
ENSCSAG00000001825 Chlorocebus sabaeus ENSCSAG00000001825 I 0.467
ENSAPLG00000007187 Anas platyrhynchos ENSAPLG00000007187 I 0.467
RORA Bos taurus ENSBTAG00000015904 I 0.467
RORC Bos taurus ENSBTAG00000017405 I 0.467
RORB Bos taurus ENSBTAG00000021699 I 0.467
ENSAPLG00000005866 Anas platyrhynchos ENSAPLG00000005866 I 0.467
ENSAMXG00000018669 Astyanax mexicanus ENSAMXG00000018669 I 0.467
ENSAMEG00000008017 Ailuropoda melanoleuca ENSAMEG00000008017 I 0.467
ENSAMEG00000015664 Ailuropoda melanoleuca ENSAMEG00000015664 I 0.467
ENSAMXG00000000403 Astyanax mexicanus ENSAMXG00000000403 I 0.467
ENSAMXG00000014990 Astyanax mexicanus ENSAMXG00000014990 I 0.467
RORB Canis familiaris ENSCAFG00000001769 I 0.467
RORC Canis familiaris ENSCAFG00000012884 I 0.467
RORC Callithrix jacchus ENSCJAG00000008023 I 0.467
RORA Cavia porcellus ENSCPOG00000008494 I 0.467
RORB Cavia porcellus ENSCPOG00000010612 I 0.467
RORC Cavia porcellus ENSCPOG00000023600 I 0.467
RORA Callithrix jacchus ENSCJAG00000003989 I 0.467
RORB Callithrix jacchus ENSCJAG00000001216 I 0.467
RORA Canis familiaris ENSCAFG00000016700 I 0.467
RORB Choloepus hoffmanni ENSCHOG00000009723 I 0.467
RORA Choloepus hoffmanni ENSCHOG00000011593 I 0.467
RORB Homo sapiens ENSG00000198963 D 0.467
roraa Gasterosteus aculeatus ENSGACG00000010672 I 0.467
RORB Monodelphis domestica ENSMODG00000002046 I 0.467
ENSMODG00000004462 Monodelphis domestica ENSMODG00000004462 I 0.467
RORA Monodelphis domestica ENSMODG00000011532 I 0.467
RORC Monodelphis domestica ENSMODG00000018911 I 0.467
RORA Macaca mulatta ENSMMUG00000018192 I 0.467
RORB Macaca mulatta ENSMMUG00000012571 I 0.467
RORA Microcebus murinus ENSMICG00000010861 I 0.467
RORA Myotis lucifugus ENSMLUG00000002493 I 0.467
RORC Myotis lucifugus ENSMLUG00000029229 I 0.467
RORC Macaca mulatta ENSMMUG00000012138 I 0.467
ENSMPUG00000003550 Mustela putorius furo ENSMPUG00000003550 I 0.467
ENSMPUG00000008883 Mustela putorius furo ENSMPUG00000008883 I 0.467
ENSNLEG00000011865 Nomascus leucogenys ENSNLEG00000011865 I 0.467
RORB Ornithorhynchus anatinus ENSOANG00000011655 I 0.467
RORA Ornithorhynchus anatinus ENSOANG00000012345 I 0.467
ENSOARG00000012659 Ovis aries ENSOARG00000012659 I 0.467
ENSNLEG00000010305 Nomascus leucogenys ENSNLEG00000010305 I 0.467
ENSNLEG00000001398 Nomascus leucogenys ENSNLEG00000001398 I 0.467
Rorc Mus musculus ENSMUSG00000028150 D 0.467
Rora Mus musculus ENSMUSG00000032238 D 0.467
Rorb Mus musculus ENSMUSG00000036192 D 0.467
RORB Microcebus murinus ENSMICG00000007512 I 0.467
RORA Meleagris gallopavo ENSMGAG00000004471 I 0.467
RORB Gorilla gorilla ENSGGOG00000011970 I 0.467
ENSGMOG00000000779 Gadus morhua ENSGMOG00000000779 I 0.467
ENSGMOG00000006930 Gadus morhua ENSGMOG00000006930 I 0.467
ENSGMOG00000016490 Gadus morhua ENSGMOG00000016490 I 0.467
RORC Gorilla gorilla ENSGGOG00000002223 I 0.467
RORA Gorilla gorilla ENSGGOG00000000541 I 0.467
rorb Gasterosteus aculeatus ENSGACG00000011556 I 0.467
RORA Gallus gallus ENSGALG00000003759 I 0.467
RORB Gallus gallus ENSGALG00000015150 I 0.467
ENSGALG00000025988 Gallus gallus ENSGALG00000025988 I 0.467
ENSLACG00000006103 Latimeria chalumnae ENSLACG00000006103 I 0.467
ENSLACG00000012803 Latimeria chalumnae ENSLACG00000012803 I 0.467
ENSLOCG00000009712 Lepisosteus oculatus ENSLOCG00000009712 I 0.467
ENSLOCG00000014779 Lepisosteus oculatus ENSLOCG00000014779 I 0.467
ENSMEUG00000008146 Macropus eugenii ENSMEUG00000008146 I 0.467
ENSMEUG00000015126 Macropus eugenii ENSMEUG00000015126 I 0.467
RORC Loxodonta africana ENSLAFG00000020960 I 0.467
RORB Loxodonta africana ENSLAFG00000012757 I 0.467
ENSLACG00000017448 Latimeria chalumnae ENSLACG00000017448 I 0.467
ENSLACG00000017778 Latimeria chalumnae ENSLACG00000017778 I 0.467
RORA Loxodonta africana ENSLAFG00000000577 I 0.467
ENSAMEG00000000363 Ailuropoda melanoleuca ENSAMEG00000000363 I 0.467