NR1I2 (Felis catus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSFCAG00000006092 T303168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NR1I2
M03925_2.00
Homo sapiens
RGKKCRNNVRGKKCR

YGMMCYBNNYGMMCY
SELEX
Nitta et al.(2015)
NR1I2_1
0.986 0.971
NR1I2
M05625_2.00
Homo sapiens
VRGTTCRNNSRGKTCRH

DYGAMCYSNNYGAACYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX
0.986 0.971
NR1I2
M09283_2.00
Homo sapiens
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C
0.986 0.971
NR1I2
M05626_2.00
Homo sapiens
VRGKKCRNNVRGKKCRN

NYGMMCYBNNYGMMCYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX
0.986 0.971
Nr1i2
M09316_2.00
Mus musculus
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C
0.968 0.957
ENSPMAG00000000180
M02403_2.00
Petromyzon marinus
RGKWCRN

NYGWMCY
PBM
Weirauch et al.(2014)
pTH5509
0.945 0.657
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.924 0.643
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.924 0.643
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.924 0.643
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.924 0.643
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.924 0.643
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.924 0.643
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.924 0.643
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.924 0.643
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.924 0.643
ENSGALG00000028624
M02398_2.00
Gallus gallus
GRGKTCAH

DTGAMCYC
PBM
Weirauch et al.(2014)
pTH6492
0.890 0.629
NR1I3
M03924_2.00
Homo sapiens
RGKDYRNNNNRGKKYR

YRMMCYNNNNYRHMCY
SELEX
Nitta et al.(2015)
NR1I3_1
0.759 0.586
NR1I3
M05619_2.00
Homo sapiens
WDAGTTCAH

DTGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_HT-SELEX
0.759 0.586
NR1I3
M09281_2.00
Homo sapiens
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_HUMAN.H11MO.0.C
0.759 0.586
NR1I3
M05620_2.00
Homo sapiens
WDAGTTCRN

NYGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_Methyl-HT-SELEX
0.759 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000005662 Nuclear receptor 46 116

Links

Other Nuclear receptor family TFs
Other Felis catus TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.989
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.986
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.986
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.986
NR1I2 Homo sapiens ENSG00000144852 D 0.986
NR1I2 Equus caballus ENSECAG00000008728 I 0.986
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.986
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.986
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.986
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.986
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.986
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.985
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.985
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.981
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.980
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.980
NR1I2 Bos taurus ENSBTAG00000019557 I 0.978
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.977
nr1i2 Danio rerio ENSDARG00000029766 I 0.974
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.968
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.968
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.968
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.968
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.968
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.967
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I 0.967
NR1I2 Procavia capensis ENSPCAG00000009674 I 0.966
NR1I2 Canis familiaris ENSCAFG00000011094 I 0.965
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.965
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I 0.962
NR1I2 Loxodonta africana ENSLAFG00000007829 I 0.961
ENSMEUG00000000113 Macropus eugenii ENSMEUG00000000113 I 0.961
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.960
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.960
vdr-a Ciona intestinalis ENSCING00000020740 I 0.958
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I 0.956
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.948
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I 0.946
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I 0.946
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I 0.945
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I 0.945
VDR Anolis carolinensis ENSACAG00000013485 I 0.945
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I 0.945
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I 0.945
vdra Takifugu rubripes ENSTRUG00000011907 I 0.945
vdrb Takifugu rubripes ENSTRUG00000011576 I 0.945
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I 0.945
vdralpha Oryzias latipes ENSORLG00000001063 I 0.945
vdr Oryzias latipes ENSORLG00000016402 I 0.945
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I 0.945
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I 0.945
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I 0.945
vdrb Gasterosteus aculeatus ENSGACG00000007975 I 0.945
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I 0.945
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I 0.945
vdrb Danio rerio ENSDARG00000070721 I 0.945
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I 0.945
vdra Gasterosteus aculeatus ENSGACG00000004763 I 0.945
Pvit_07440 Pogona vitticeps Pvit_07440 I 0.945
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I 0.945
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D 0.945
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I 0.943
vdr.S Xenopus laevis XB-GENE-864847 I 0.933
vdr Xenopus tropicalis XB-GENE-486505 I 0.931
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.928
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.926
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.926
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.926
Aan_R009572 Calypte anna Aan_R009572 I 0.926
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.925
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.924
VDR Tursiops truncatus ENSTTRG00000012578 I 0.924
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.924
VDR Sus scrofa ENSSSCG00000020864 I 0.924
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.924
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.924
VDR Otolemur garnettii ENSOGAG00000005480 I 0.924
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.924
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.924
VDR Tupaia belangeri ENSTBEG00000005717 I 0.924
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.924
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.924
VDR Macaca mulatta ENSMMUG00000006727 I 0.924
VDR Canis familiaris ENSCAFG00000009103 I 0.924
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.924
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.924
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.924
VDR Loxodonta africana ENSLAFG00000006418 I 0.924
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.924
VDR Homo sapiens ENSG00000111424 D 0.924
VDR Felis catus ENSFCAG00000024594 I 0.924
VDR Equus caballus ENSECAG00000015822 I 0.924
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.924
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.924
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.924
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.924
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.924
VDR Gorilla gorilla ENSGGOG00000016473 I 0.924
VDR Callithrix jacchus ENSCJAG00000015018 I 0.924
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.924
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.924
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.924
Vdr Mus musculus ENSMUSG00000022479 D 0.924
VDR Microcebus murinus ENSMICG00000009017 I 0.924
VDR Bos taurus ENSBTAG00000016414 I 0.924
VDR Myotis lucifugus ENSMLUG00000000912 I 0.924
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.923
vdra Tetraodon nigroviridis ENSTNIG00000005559 I 0.922
Pvit_09406 Pogona vitticeps Pvit_09406 I 0.917
Pvit_09404 Pogona vitticeps Pvit_09404 I 0.917
ENSPSIG00000004437 Pelodiscus sinensis ENSPSIG00000004437 I 0.911
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I 0.910
Alligator_sinensis_CCG006068.1 Alligator sinensis Alligator_sinensis_CCG006068.1 I 0.910
Cmyd_10001928 Chelonia mydas Cmyd_10001928 I 0.908
ENSAMEG00000015383 Ailuropoda melanoleuca ENSAMEG00000015383 I 0.894
ENSACAG00000001535 Anolis carolinensis ENSACAG00000001535 I 0.892
ENSGALG00000028624 Gallus gallus ENSGALG00000028624 D 0.890
ENSSTOG00000003818 Ictidomys tridecemlineatus ENSSTOG00000003818 I 0.890
Q9DFH3_CHICK Gallus gallus Q9DFH3_CHICK I 0.890
Ogr03312 Ophisaurus gracilis Ogr03312 I 0.888
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I 0.883
nr1i2 Takifugu rubripes ENSTRUG00000003245 I 0.880
ENSTSYG00000003990 Tarsius syrichta ENSTSYG00000003990 I 0.873
NR1I3 Cavia porcellus ENSCPOG00000015331 I 0.863
ENSXMAG00000003990 Xiphophorus maculatus ENSXMAG00000003990 I 0.862
SNAPOd2T00001873001 Oikopleura dioica SNAPOd2T00001873001 I 0.860
Alligator_sinensis_CCG005392.1 Alligator sinensis Alligator_sinensis_CCG005392.1 I 0.854
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.840
nr1i2 Oryzias latipes ENSORLG00000017953 I 0.837
NR1I3 Equus caballus ENSECAG00000020930 I 0.837
NR1I3 Sus scrofa ENSSSCG00000006353 I 0.836
ENSP00000356959-D1 Bos grunniens ENSP00000356959-D1 I 0.836
ENSMPUG00000014388 Mustela putorius furo ENSMPUG00000014388 I 0.836
ENSCSAVG00000008466 Ciona savignyi ENSCSAVG00000008466 I 0.836
NR1I3 Bos taurus ENSBTAG00000009215 I 0.836
NR1I3 Sorex araneus ENSSARG00000002684 I 0.836
NR1I3 Felis catus ENSFCAG00000000497 I 0.827
NR1I3 Loxodonta africana ENSLAFG00000001180 I 0.823
NR1I3 Procavia capensis ENSPCAG00000013933 I 0.823
ENSMEUG00000001987 Macropus eugenii ENSMEUG00000001987 I 0.822
NR1I3 Canis familiaris ENSCAFG00000012921 I 0.820
ENSSHAG00000016687 Sarcophilus harrisii ENSSHAG00000016687 I 0.819
SMU15000518 Schmidtea mediterranea SMU15000518 I 0.814
NR1I3 Monodelphis domestica ENSMODG00000005089 I 0.809
NR1I3 Pteropus vampyrus ENSPVAG00000005540 I 0.806
D917_00700 Trichinella nativa D917_00700 I 0.805
EFV58098 Trichinella spiralis EFV58098 I 0.805
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.805
D918_02615 Trichuris suis D918_02615 I 0.805
ENSCSAG00000007092 Chlorocebus sabaeus ENSCSAG00000007092 I 0.801
ENSPPYG00000013508 Pongo abelii ENSPPYG00000013508 I 0.801
ENSPANG00000004760 Papio anubis ENSPANG00000004760 I 0.801
tetur01g10970 Tetranychus urticae tetur01g10970 I 0.799
ENSOARG00000009965 Ovis aries ENSOARG00000009965 I 0.797
ENSONIG00000014385 Oreochromis niloticus ENSONIG00000014385 I 0.794
NR1I3 Erinaceus europaeus ENSEEUG00000004981 I 0.793
NR1I3 Dasypus novemcinctus ENSDNOG00000045179 I 0.791
NR1I3 Oryctolagus cuniculus ENSOCUG00000013537 I 0.784
NR1I3 Otolemur garnettii ENSOGAG00000013738 I 0.777
ENSPMAG00000008742 Petromyzon marinus ENSPMAG00000008742 I 0.776
NR1I3 Ochotona princeps ENSOPRG00000003455 I 0.775
ENSDORG00000001701 Dipodomys ordii ENSDORG00000001701 I 0.773
thraa Danio rerio ENSDARG00000000151 I 0.764
THRA Echinops telfairi ENSETEG00000013166 I 0.764
NR1I3 Homo sapiens ENSG00000143257 D 0.759
ENSNLEG00000014287 Nomascus leucogenys ENSNLEG00000014287 I 0.759
NR1I3 Callithrix jacchus ENSCJAG00000004783 I 0.759
NR1I3 Pan troglodytes ENSPTRG00000001582 I 0.759
ENSPPYG00000014063 Pongo abelii ENSPPYG00000014063 I 0.756
NR1I3 Gorilla gorilla ENSGGOG00000005724 I 0.755
NR1I3 Macaca mulatta ENSMMUG00000018128 I 0.751
ENSCSAG00000002676 Chlorocebus sabaeus ENSCSAG00000002676 I 0.751
ENSPANG00000014194 Papio anubis ENSPANG00000014194 I 0.751
ENSP00000356959 Macaca fascicularis ENSP00000356959 I 0.751
estExt_gwp.C_2760053 Branchiostoma floridae estExt_gwp.C_2760053 I 0.751
estExt_fgenesh2_pg.C_120005 Branchiostoma floridae estExt_fgenesh2_pg.C_120005 I 0.751
LotgiG138244 Lottia gigantea LotgiG138244 I 0.748
CapteG222512 Capitella teleta CapteG222512 I 0.747
ENSGMOG00000016130 Gadus morhua ENSGMOG00000016130 I 0.746