ENSGALG00000028624 (Gallus gallus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSGALG00000028624 T303358_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSGALG00000028624
M02398_2.00
Gallus gallus
GRGKTCAH

DTGAMCYC
PBM
Weirauch et al.(2014)
pTH6492
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.932 0.643
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.932 0.643
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.932 0.643
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.932 0.643
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.932 0.643
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.932 0.643
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.932 0.643
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.932 0.643
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.932 0.643
ENSPMAG00000000180
M02403_2.00
Petromyzon marinus
RGKWCRN

NYGWMCY
PBM
Weirauch et al.(2014)
pTH5509
0.912 0.671
NR1I2
M03925_2.00
Homo sapiens
RGKKCRNNVRGKKCR

YGMMCYBNNYGMMCY
SELEX
Nitta et al.(2015)
NR1I2_1
0.890 0.629
NR1I2
M05625_2.00
Homo sapiens
VRGTTCRNNSRGKTCRH

DYGAMCYSNNYGAACYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX
0.890 0.629
NR1I2
M09283_2.00
Homo sapiens
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C
0.890 0.629
NR1I2
M05626_2.00
Homo sapiens
VRGKKCRNNVRGKKCRN

NYGMMCYBNNYGMMCYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX
0.890 0.629
Nr1i3
M09302_2.00
Mus musculus
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_MOUSE.H11MO.0.C
0.874 0.657
Nr1i2
M09316_2.00
Mus musculus
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C
0.802 0.629
EcR
M06414_2.00
Drosophila melanogaster
RAGGTCAW

WTGACCTY
B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546
0.781 0.571
NR1I3
M03924_2.00
Homo sapiens
RGKDYRNNNNRGKKYR

YRMMCYNNNNYRHMCY
SELEX
Nitta et al.(2015)
NR1I3_1
0.749 0.643
NR1I3
M05619_2.00
Homo sapiens
WDAGTTCAH

DTGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_HT-SELEX
0.749 0.643
NR1I3
M09281_2.00
Homo sapiens
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_HUMAN.H11MO.0.C
0.749 0.643
NR1I3
M05620_2.00
Homo sapiens
WDAGTTCRN

NYGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_Methyl-HT-SELEX
0.749 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02398_2.00 Nuclear receptor 1 70

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000043376 Nuclear receptor 29 98

Links

Other Nuclear receptor family TFs
Other Gallus gallus TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Q9DFH3_CHICK Gallus gallus Q9DFH3_CHICK I 0.990
ENSPSIG00000004437 Pelodiscus sinensis ENSPSIG00000004437 I 0.980
ENSACAG00000001535 Anolis carolinensis ENSACAG00000001535 I 0.979
Cmyd_10001928 Chelonia mydas Cmyd_10001928 I 0.978
Alligator_sinensis_CCG006068.1 Alligator sinensis Alligator_sinensis_CCG006068.1 I 0.976
Ogr03312 Ophisaurus gracilis Ogr03312 I 0.973
Pvit_09406 Pogona vitticeps Pvit_09406 I 0.968
Pvit_09404 Pogona vitticeps Pvit_09404 I 0.968
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.934
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.933
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.933
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.933
Aan_R009572 Calypte anna Aan_R009572 I 0.933
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.933
VDR Felis catus ENSFCAG00000024594 I 0.932
VDR Homo sapiens ENSG00000111424 D 0.932
VDR Otolemur garnettii ENSOGAG00000005480 I 0.932
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.932
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.932
VDR Equus caballus ENSECAG00000015822 I 0.932
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.932
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.932
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.932
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.932
VDR Macaca mulatta ENSMMUG00000006727 I 0.932
VDR Myotis lucifugus ENSMLUG00000000912 I 0.932
VDR Microcebus murinus ENSMICG00000009017 I 0.932
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.932
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.932
VDR Loxodonta africana ENSLAFG00000006418 I 0.932
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.932
VDR Gorilla gorilla ENSGGOG00000016473 I 0.932
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.932
Vdr Mus musculus ENSMUSG00000022479 D 0.932
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.932
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.932
VDR Canis familiaris ENSCAFG00000009103 I 0.932
VDR Sus scrofa ENSSSCG00000020864 I 0.932
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.932
VDR Tursiops truncatus ENSTTRG00000012578 I 0.932
VDR Bos taurus ENSBTAG00000016414 I 0.932
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.932
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.932
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.932
VDR Callithrix jacchus ENSCJAG00000015018 I 0.932
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.932
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.932
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.932
VDR Tupaia belangeri ENSTBEG00000005717 I 0.932
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.932
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.928
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.924
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I 0.921
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.918
vdr-a Ciona intestinalis ENSCING00000020740 I 0.916
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I 0.913
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I 0.913
vdrb Danio rerio ENSDARG00000070721 I 0.913
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I 0.913
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I 0.913
vdra Takifugu rubripes ENSTRUG00000011907 I 0.913
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I 0.913
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I 0.913
vdr Oryzias latipes ENSORLG00000016402 I 0.913
vdralpha Oryzias latipes ENSORLG00000001063 I 0.913
vdrb Takifugu rubripes ENSTRUG00000011576 I 0.913
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I 0.913
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I 0.913
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I 0.912
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I 0.912
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I 0.912
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D 0.912
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I 0.912
vdrb Gasterosteus aculeatus ENSGACG00000007975 I 0.912
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I 0.912
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I 0.912
vdra Gasterosteus aculeatus ENSGACG00000004763 I 0.912
VDR Anolis carolinensis ENSACAG00000013485 I 0.910
Pvit_07440 Pogona vitticeps Pvit_07440 I 0.910
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I 0.909
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.906
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.900
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.899
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.899
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I 0.895
vdr.S Xenopus laevis XB-GENE-864847 I 0.892
vdr Xenopus tropicalis XB-GENE-486505 I 0.891
NR1I2 Felis catus ENSFCAG00000006092 I 0.890
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.890
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.890
NR1I2 Equus caballus ENSECAG00000008728 I 0.890
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.890
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.890
NR1I2 Homo sapiens ENSG00000144852 D 0.890
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.890
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.890
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.890
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.890
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.890
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.890
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I 0.889
NR1I2 Canis familiaris ENSCAFG00000011094 I 0.888
ENSTSYG00000003990 Tarsius syrichta ENSTSYG00000003990 I 0.885
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.883
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.883
NR1I2 Bos taurus ENSBTAG00000019557 I 0.883
NR1I3 Loxodonta africana ENSLAFG00000001180 I 0.881
NR1I3 Procavia capensis ENSPCAG00000013933 I 0.881
nr1i2 Danio rerio ENSDARG00000029766 I 0.880
ENSSHAG00000016687 Sarcophilus harrisii ENSSHAG00000016687 I 0.880
NR1I3 Canis familiaris ENSCAFG00000012921 I 0.878
NR1I3 Pteropus vampyrus ENSPVAG00000005540 I 0.876
NR1I3 Erinaceus europaeus ENSEEUG00000004981 I 0.875
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I 0.875
ENSMEUG00000000113 Macropus eugenii ENSMEUG00000000113 I 0.875
ENSSTOG00000003818 Ictidomys tridecemlineatus ENSSTOG00000003818 I 0.874
Nr1i3 Mus musculus ENSMUSG00000005677 D 0.874
Nr1i3 Rattus norvegicus ENSRNOG00000003260 I 0.874
NR1I3 Dasypus novemcinctus ENSDNOG00000045179 I 0.874
ENSMEUG00000001987 Macropus eugenii ENSMEUG00000001987 I 0.874
NR1I3 Sorex araneus ENSSARG00000002684 I 0.871
NR1I3 Cavia porcellus ENSCPOG00000015331 I 0.870
ENSAMEG00000015383 Ailuropoda melanoleuca ENSAMEG00000015383 I 0.869
NR1I3 Oryctolagus cuniculus ENSOCUG00000013537 I 0.868
NR1I3 Equus caballus ENSECAG00000020930 I 0.866
NR1I3 Sus scrofa ENSSSCG00000006353 I 0.865
ENSP00000356959-D1 Bos grunniens ENSP00000356959-D1 I 0.865
NR1I3 Bos taurus ENSBTAG00000009215 I 0.865
ENSMPUG00000014388 Mustela putorius furo ENSMPUG00000014388 I 0.863
NR1I3 Otolemur garnettii ENSOGAG00000013738 I 0.862
NR1I3 Felis catus ENSFCAG00000000497 I 0.859
ENSDORG00000001701 Dipodomys ordii ENSDORG00000001701 I 0.858
NR1I3 Monodelphis domestica ENSMODG00000005089 I 0.858
NR1I3 Ochotona princeps ENSOPRG00000003455 I 0.834
ENSCSAVG00000008466 Ciona savignyi ENSCSAVG00000008466 I 0.818
vdra Tetraodon nigroviridis ENSTNIG00000005559 I 0.816
GJ20887 Drosophila virilis FBgn0208023 I 0.814
GI21285 Drosophila mojavensis FBgn0144015 I 0.814
GH20948 Drosophila grimshawi FBgn0128410 I 0.814
CapteG125155 Capitella teleta CapteG125155 I 0.814
NR1I2 Loxodonta africana ENSLAFG00000007829 I 0.814
LotgiG170342 Lottia gigantea LotgiG170342 I 0.812
ENSPMAG00000008742 Petromyzon marinus ENSPMAG00000008742 I 0.803
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.802
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.802
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.802
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.802
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.802
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.791
NR1I2 Procavia capensis ENSPCAG00000009674 I 0.791
GG10830 Drosophila erecta FBgn0103135 I 0.784
CGI_10007606 Crassostrea gigas CGI_10007606 I 0.782
GA24101 Drosophila pseudoobscura FBgn0245500 I 0.781
GF13818 Drosophila ananassae FBgn0090845 I 0.781
GD10334 Drosophila simulans FBgn0182106 I 0.781
GK21996 Drosophila willistoni FBgn0223981 I 0.781
GL16258 Drosophila persimilis FBgn0153862 I 0.781
EcR Drosophila melanogaster FBgn0000546 D 0.781
ENSOARG00000009965 Ovis aries ENSOARG00000009965 I 0.781
GE19426 Drosophila yakuba FBgn0236769 I 0.781
GM16480 Drosophila sechellia FBgn0171395 I 0.781
EcR Drosophila pseudoobscura FBgn0243551 I 0.781
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.775
Alligator_sinensis_CCG005392.1 Alligator sinensis Alligator_sinensis_CCG005392.1 I 0.773
SNAPOd2T00001873001 Oikopleura dioica SNAPOd2T00001873001 I 0.772
AGAP012211 Anopheles gambiae AGAP012211 I 0.769
BGIBMGA006767 Bombyx mori BGIBMGA006767 I 0.769
ASTEI02489 Anopheles stephensi ASTEI02489 I 0.769
AFUN015736 Anopheles funestus AFUN015736 I 0.769
CpipJ_CPIJ002963 Culex pipiens CpipJ_CPIJ002963 I 0.769
AFAF021556 Anopheles farauti AFAF021556 I 0.769
AQUA002870 Anopheles quadriannulatus AQUA002870 I 0.769
LCUP007589 Lucilia cuprina LCUP007589 I 0.769
ADAC008672 Anopheles darlingi ADAC008672 I 0.769
AMIN006955 Anopheles minimus AMIN006955 I 0.769
HMEL012265 Heliconius melpomene HMEL012265 I 0.769
KGM_08219 Danaus plexippus KGM_08219 I 0.769
AATE015478 Anopheles atroparvus AATE015478 I 0.769
AARA003299 Anopheles arabiensis AARA003299 I 0.769
ACOM026429 Anopheles coluzzii ACOM026429 I 0.769
ACUA000806 Anopheles culicifacies ACUA000806 I 0.769
ADIR001886 Anopheles dirus ADIR001886 I 0.769
AALB010791 Anopheles albimanus AALB010791 I 0.769
AEPI000843 Anopheles epiroticus AEPI000843 I 0.769
CPIJ002963 Culex quinquefasciatus CPIJ002963 I 0.769
AMEM018998 Anopheles merus AMEM018998 I 0.769
MDOA013387 Musca domestica MDOA013387 I 0.769
ECR Aedes aegypti AAEL009600 I 0.769
PPAI003337 Phlebotomus papatasi PPAI003337 I 0.768
NR1I3 Callithrix jacchus ENSCJAG00000004783 I 0.765
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.757
TriadG21656 Trichoplax adhaerens TriadG21656 I 0.757
NV11088 Nasonia vitripennis NV11088 I 0.752
RPRC014174 Rhodnius prolixus RPRC014174 I 0.752
L798_01568 Zootermopsis nevadensis L798_01568 I 0.752
ISCW003147 Ixodes scapularis ISCW003147 I 0.752
SMAR011767 Strigamia maritima SMAR011767 I 0.752
TC012112 Tribolium castaneum TC012112 I 0.752
GB48059 Apis mellifera GB48059 I 0.752
tetur01g15140 Tetranychus urticae tetur01g15140 I 0.752
ACYPI001692 Acyrthosiphon pisum ACYPI001692 I 0.752
DAPPUDRAFT_319648 Daphnia pulex DAPPUDRAFT_319648 I 0.751
NR1I3 Homo sapiens ENSG00000143257 D 0.749
PHUM467460 Pediculus humanus PHUM467460 I 0.749
ENSNLEG00000014287 Nomascus leucogenys ENSNLEG00000014287 I 0.749
NR1I3 Pan troglodytes ENSPTRG00000001582 I 0.749
LDEC009466 Leptinotarsa decemlineata LDEC009466 I 0.749
D917_00700 Trichinella nativa D917_00700 I 0.748
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.748
EFV58098 Trichinella spiralis EFV58098 I 0.748
D918_02615 Trichuris suis D918_02615 I 0.748
BGLB013636 Biomphalaria glabrata BGLB013636 I 0.746
NR1I3 Gorilla gorilla ENSGGOG00000005724 I 0.746