CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NR2E3
(
Meleagris gallopavo
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSMGAG00000001449
T303650_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.787
0.844
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.849
0.678
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN
NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.745
0.644
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD
HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.745
0.644
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.745
0.644
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA
TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.745
0.627
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000000921
Nuclear receptor
37
95
LLCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGLLQAGMNKDAVQNER
ENSMGAP00000018899
Nuclear receptor
33
78
LLCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGLX
Links
Other
Nuclear receptor
family TFs
Other
Meleagris gallopavo
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy