CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

PPARA *(Meleagris gallopavo)* Nuclear receptor
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00105 (zf-C4)	IPR001628	ENSMGAG00000013838	T303678_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PPARA M09295_2.00	Homo sapiens	NWSTRGGBSARAGGKBA	TVMCCTYTSVCCYASWN	Misc Kulakovskiy et al.(2013) PPARA_HUMAN.H11MO.0.B	0.987	0.955
Ppara M09314_2.00	Mus musculus	HWSTRGGBSARAGGKBA	TVMCCTYTSVCCYASWD	Misc Kulakovskiy et al.(2013) PPARA_MOUSE.H11MO.0.A	0.987	0.955
PPARA M11183_2.00	Homo sapiens	CWRAWCYAGGNCAWAGKTCA	TGAMCTWTGNCCTRGWTYWG	Transfac Matys et al.(2006) V$PPARA_01	0.987	0.955
PPARA M11184_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PPARA_Q6	0.987	0.955
PPARD M05581_2.00	Homo sapiens	NRRGGTCAAAGGTCAN	NTGACCTTTGACCYYN	SELEX Yin et al.(2017) PPARD_eDBD_HT-SELEX_1	0.986	0.851
PPARD M05582_2.00	Homo sapiens	HRRGGTCAYGACCYYD	HRRGGTCRTGACCYYD	SELEX Yin et al.(2017) PPARD_eDBD_HT-SELEX_2	0.986	0.851
PPARD M05583_2.00	Homo sapiens	NRRGGTCAAAGGTCRN	NYGACCTTTGACCYYN	SELEX Yin et al.(2017) PPARD_eDBD_Methyl-HT-SELEX_1	0.986	0.851
PPARD M05584_2.00	Homo sapiens	NRRGGTCRCGACCYYN	NRRGGTCGYGACCYYN	SELEX Yin et al.(2017) PPARD_eDBD_Methyl-HT-SELEX_2	0.986	0.851
Pparg M05884_2.00	Mus musculus	HWNTRGGKYANB	VNTRMCCYANWD	SMiLE-seq Isakova et al.(2017) PPARg	0.982	0.881
PPARG M02707_2.00	Homo sapiens	STRGGTCANNDTGACCYANW	WNTRGGTCAHNNTGACCYAS	SELEX Mathelier et al.(2014) MA0066.1	0.982	0.881
PPARG M09278_2.00	Homo sapiens	VWSKRGGKSARAGGKSA	TSMCCTYTSMCCYMSWB	Misc Kulakovskiy et al.(2013) PPARG_HUMAN.H11MO.0.A	0.982	0.881
Pparg M09299_2.00	Mus musculus	HWBTRGGBSARAGGKNA	TNMCCTYTSVCCYAVWD	Misc Kulakovskiy et al.(2013) PPARG_MOUSE.H11MO.0.A	0.982	0.881
Pparg M09612_2.00	Mus musculus	TRGGNCARAGGKCA	TGMCCTYTGNCCYA	Misc Heinz et al.(2010) 3T3L1-Pparg_GSE13511	0.982	0.881
PPARG M11138_2.00	Homo sapiens	NNDRRGGTCAAAGGTCAHVND	HNBDTGACCTTTGACCYYHNN	Transfac Matys et al.(2006) V$PPARG_01	0.982	0.881
PPARG M11139_2.00	Homo sapiens	AWBTRGGTCACNDTGACCTASTT	AASTAGGTCAHNGTGACCYAVWT	Transfac Matys et al.(2006) V$PPARG_02	0.982	0.881
PPARG M11140_2.00	Homo sapiens	WWBHRGGNYAAAGKTCA	TGAMCTTTRNCCYDVWW	Transfac Matys et al.(2006) V$PPARG_03	0.982	0.881
PPARG M11141_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PPARG_Q6	0.982	0.881
Rarb M02401_2.00	Mus musculus	NRRGGTCAHN	NDTGACCYYN	PBM Weirauch et al.(2014) pTH2804	0.945	0.642
RARB M03355_2.00	Homo sapiens	AAAGGTCAARAGGTCA	TGACCTYTTGACCTTT	SELEX Jolma et al.(2013) RARB_1	0.945	0.642
Rarb M03423_2.00	Mus musculus	WAAGGTCAAAAGGTCA	TGACCTTTTGACCTTW	SELEX Jolma et al.(2013) Rarb_1	0.945	0.642
Rarb M03424_2.00	Mus musculus	RRAGGTCANBWRAGGTCA	TGACCTYWVNTGACCTYY	SELEX Jolma et al.(2013) Rarb_2	0.945	0.642
Rarb M03425_2.00	Mus musculus	AGGTCAHVBWRAGGTCA	TGACCTYWVBDTGACCT	SELEX Jolma et al.(2013) Rarb_3	0.945	0.642
RARB M05563_2.00	Homo sapiens	NHAAGGTCAN	NTGACCTTDN	SELEX Yin et al.(2017) RARB_FL_HT-SELEX_1	0.945	0.642
RARB M05564_2.00	Homo sapiens	RRGGTCAARRGGTCAN	NTGACCYYTTGACCYY	SELEX Yin et al.(2017) RARB_FL_HT-SELEX_2	0.945	0.642
RARB M05565_2.00	Homo sapiens	DAGGTCAYGACCYY	RRGGTCRTGACCTH	SELEX Yin et al.(2017) RARB_FL_HT-SELEX_3	0.945	0.642
RARB M11094_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR1B2_Q6	0.945	0.642
RARB M05566_2.00	Homo sapiens	NHRAGGTCAH	DTGACCTYDN	SELEX Yin et al.(2017) RARB_FL_Methyl-HT-SELEX_1	0.945	0.642
RARB M05567_2.00	Homo sapiens	RRGGTCAHRRGGTCAN	NTGACCYYDTGACCYY	SELEX Yin et al.(2017) RARB_FL_Methyl-HT-SELEX_2	0.945	0.642
RARB M05568_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RARB_FL_Methyl-HT-SELEX_3	0.945	0.642
Rara M00185_2.00	Mus musculus	NRGGTCAN	NTGACCYN	PBM Badis et al.(2009) Rara_1051	0.944	0.627
RARA M03369_2.00	Homo sapiens	RRAGGTCAWBWRRGGTCA	TGACCYYWVWTGACCTYY	SELEX Jolma et al.(2013) RARA_1	0.944	0.627
RARA M03370_2.00	Homo sapiens	RAGGTCAAAAGGTCAWKB	VMWTGACCTTTTGACCTY	SELEX Jolma et al.(2013) RARA_2	0.944	0.627
RARA M03371_2.00	Homo sapiens	AGGTCAHNYWRAGGTCA	TGACCTYWRNDTGACCT	SELEX Jolma et al.(2013) RARA_3	0.944	0.627
RARA M03372_2.00	Homo sapiens	ARGGTCAAAAGGTCA	TGACCTTTTGACCYT	SELEX Jolma et al.(2013) RARA_4	0.944	0.627
RARA M03373_2.00	Homo sapiens	WRRGGTCAHSHRRGGTCA	TGACCYYDSDTGACCYYW	SELEX Jolma et al.(2013) RARA_5	0.944	0.627
RARA M03374_2.00	Homo sapiens	AGGTCAWNNARAGGTCA	TGACCTYTNNWTGACCT	SELEX Jolma et al.(2013) RARA_6	0.944	0.627
Rara M03432_2.00	Mus musculus	AAAGGTCAHBVRAGGTCA	TGACCTYBVDTGACCTTT	SELEX Jolma et al.(2013) Rara_1	0.944	0.627
Rara M03433_2.00	Mus musculus	AGGTCAHNHAAAGGTCA	TGACCTTTDNDTGACCT	SELEX Jolma et al.(2013) Rara_2	0.944	0.627
Rara M03434_2.00	Mus musculus	RAGGTCAAAAGGTCA	TGACCTTTTGACCTY	SELEX Jolma et al.(2013) Rara_3	0.944	0.627
RARA M05607_2.00	Homo sapiens	NVGGKCANNRGGKCAN	NTGMCCYNNTGMCCBN	SELEX Yin et al.(2017) RARA_eDBD_HT-SELEX_1	0.944	0.627
RARA M05608_2.00	Homo sapiens	NVGGKCAYGNCCBN	NVGGNCRTGMCCBN	SELEX Yin et al.(2017) RARA_eDBD_HT-SELEX_2	0.944	0.627
RARA M05609_2.00	Homo sapiens	NRRGGTCANV	BNTGACCYYN	SELEX Yin et al.(2017) RARA_eDBD_HT-SELEX_3	0.944	0.627
RARA M05878_2.00	Homo sapiens	RAGGTCA	TGACCTY	SMiLE-seq Isakova et al.(2017) RARa	0.944	0.627
RARA M09277_2.00	Homo sapiens	RRRDVDBSNDRAGKTCARGG	CCYTGAMCTYHNSVHBHYYY	Misc Kulakovskiy et al.(2013) RARA_HUMAN.H11MO.0.A	0.944	0.627
Rara M09329_2.00	Mus musculus	RGRTCRDRAGKTCAAGGTCA	TGACCTTGAMCTYHYGAYCY	Misc Kulakovskiy et al.(2013) RARA_MOUSE.H11MO.0.A	0.944	0.627
RARA M11137_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR1B1_Q6	0.944	0.627
RARA M05610_2.00	Homo sapiens	DRGGKCRNDRGGTCRN	NYGACCYHNYGMCCYH	SELEX Yin et al.(2017) RARA_eDBD_Methyl-HT-SELEX_1	0.944	0.627
RARA M05611_2.00	Homo sapiens	NVGGTCAYGMCCYN	NRGGKCRTGACCBN	SELEX Yin et al.(2017) RARA_eDBD_Methyl-HT-SELEX_2	0.944	0.627
RARA M05612_2.00	Homo sapiens	NRAGGTCANN	NNTGACCTYN	SELEX Yin et al.(2017) RARA_eDBD_Methyl-HT-SELEX_3	0.944	0.627
usp M03934_2.00	Drosophila melanogaster	ARRGGTCAAAGGTCA	TGACCTTTGACCYYT	SELEX Nitta et al.(2015) usp_1	0.938	0.627
usp M06426_2.00	Drosophila melanogaster	HRRGGTCAH	DTGACCYYD	B1H Zhu et al.(2011) usp_SANGER_5_FBgn0003964	0.938	0.627
usp M02709_2.00	Drosophila melanogaster	GGGGTCACSN	NSGTGACCCC	SELEX Mathelier et al.(2014) MA0016.1	0.938	0.627
usp M09689_2.00	Drosophila melanogaster	KRGGTCACG	CGTGACCYM	Misc Kulakovskiy et al.(2009) usp	0.938	0.627
usp M11191_2.00	Drosophila melanogaster	GRGGTCAYS	SRTGACCYC	Transfac Matys et al.(2006) I$CF1_01	0.938	0.627
usp M11192_2.00	Drosophila melanogaster	GGGGTCAYS	SRTGACCCC	Transfac Matys et al.(2006) I$CF1_02	0.938	0.627
Rxrg M02400_2.00	Mus musculus	VRGGTCAN	NTGACCYB	PBM Weirauch et al.(2014) pTH2880	0.937	0.642
RXRG M03375_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRG_1	0.937	0.642
RXRG M03376_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRG_2	0.937	0.642
RXRG M03377_2.00	Homo sapiens	GRGGTCAAAGGTCA	TGACCTTTGACCYC	SELEX Jolma et al.(2013) RXRG_3	0.937	0.642
RXRG M03378_2.00	Homo sapiens	NRGGTCATGACCYC	GRGGTCATGACCYN	SELEX Jolma et al.(2013) RXRG_4	0.937	0.642
RXRG M02746_2.00	Homo sapiens	GGTCAAAGGTCA	TGACCTTTGACC	SELEX Jolma et al.(2010) RXRG_dimer	0.937	0.642
RXRG M05615_2.00	Homo sapiens	VRGGTCAAAGGTCAN	NTGACCTTTGACCYB	SELEX Yin et al.(2017) RXRG_FL_HT-SELEX_1	0.937	0.642
RXRG M05616_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RXRG_FL_HT-SELEX_2	0.937	0.642
RXRG M05879_2.00	Homo sapiens	RGGTBAARGGTBRND	HNYVACCYTTVACCY	SMiLE-seq Isakova et al.(2017) RXRg	0.937	0.642
RXRG M09280_2.00	Homo sapiens	NGTCAAAGGTCAH	DTGACCTTTGACN	Misc Kulakovskiy et al.(2013) RXRG_HUMAN.H11MO.0.B	0.937	0.642
Rxrg M09305_2.00	Mus musculus	VDDVDNSVNRAGKTCAAGGYCA	TGRCCTTGAMCTYNBSNHBHHB	Misc Kulakovskiy et al.(2013) RXRG_MOUSE.H11MO.0.B	0.937	0.642
RXRG M05617_2.00	Homo sapiens	DRGGTBAARGGTBRN	NYVACCYTTVACCYH	SELEX Yin et al.(2017) RXRG_FL_Methyl-HT-SELEX_1	0.937	0.642
RXRG M05618_2.00	Homo sapiens	VRGGTCAYGACCYB	VRGGTCRTGACCYB	SELEX Yin et al.(2017) RXRG_FL_Methyl-HT-SELEX_2	0.937	0.642
RARG M02397_2.00	Homo sapiens	VGGTCANN	NNTGACCB	PBM Weirauch et al.(2014) pTH5430	0.934	0.612
Rarg M00810_2.00	Mus musculus	NNVGKTCANN	NNTGAMCBNN	PBM Weirauch et al.(2013) pTH4269	0.934	0.612
RARG M03391_2.00	Homo sapiens	SRGGTCAAAAGGTCAVD	HBTGACCTTTTGACCYS	SELEX Jolma et al.(2013) RARG_1	0.934	0.612
RARG M03392_2.00	Homo sapiens	RAGGTCAHVHWRAGGTCA	TGACCTYWDBDTGACCTY	SELEX Jolma et al.(2013) RARG_2	0.934	0.612
RARG M03393_2.00	Homo sapiens	RRGGTCAHNNRAGGTCA	TGACCTYNNDTGACCYY	SELEX Jolma et al.(2013) RARG_3	0.934	0.612
RARG M03394_2.00	Homo sapiens	GAGGTCAAAAGGTCAY	RTGACCTTTTGACCTC	SELEX Jolma et al.(2013) RARG_4	0.934	0.612
RARG M03395_2.00	Homo sapiens	RAGGTCAABYARRGKTCA	TGAMCYYTRVTTGACCTY	SELEX Jolma et al.(2013) RARG_5	0.934	0.612
RARG M03396_2.00	Homo sapiens	RAGGTCAHBNVRGGTCA	TGACCYBNVDTGACCTY	SELEX Jolma et al.(2013) RARG_6	0.934	0.612
Rarg M03416_2.00	Mus musculus	RRGGTCAAAAGGTCAH	DTGACCTTTTGACCYY	SELEX Jolma et al.(2013) Rarg_1	0.934	0.612
Rarg M03417_2.00	Mus musculus	RAGGTCAWVHAAAGGTCA	TGACCTTTDBWTGACCTY	SELEX Jolma et al.(2013) Rarg_2	0.934	0.612
Rarg M03418_2.00	Mus musculus	AAGGTCAHSARAGGTCA	TGACCTYTSDTGACCTT	SELEX Jolma et al.(2013) Rarg_3	0.934	0.612
RARG M05653_2.00	Homo sapiens	NRGGTCANV	BNTGACCYN	SELEX Yin et al.(2017) RARG_FL_HT-SELEX	0.934	0.612
RARG M05649_2.00	Homo sapiens	DRGGTCAAAAGKTCAN	NTGAMCTTTTGACCYH	SELEX Yin et al.(2017) RARG_eDBD_HT-SELEX_1	0.934	0.612
RARG M05650_2.00	Homo sapiens	RAGGTCATGACCTH	DAGGTCATGACCTY	SELEX Yin et al.(2017) RARG_eDBD_HT-SELEX_2	0.934	0.612
Rarg M05885_2.00	Mus musculus	NRGGTCANDRGKKYA	TRMMCYHNTGACCYN	SMiLE-seq Isakova et al.(2017) RARg	0.934	0.612
RARG M09289_2.00	Homo sapiens	RGGTCAVVVWGNMMNNDV	BHNNKKNCWBBBTGACCY	Misc Kulakovskiy et al.(2013) RARG_HUMAN.H11MO.0.B	0.934	0.612
Rarg M09300_2.00	Mus musculus	RGGTCAVVVWGNMMNNDV	BHNNKKNCWBBBTGACCY	Misc Kulakovskiy et al.(2013) RARG_MOUSE.H11MO.0.C	0.934	0.612
Rarg M09613_2.00	Mus musculus	RGKTCAAGGBCA	TGVCCTTGAMCY	Misc Heinz et al.(2010) ES-RARg_GSE30538	0.934	0.612
RARG M11167_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RARG_Q3	0.934	0.612
RARG M05654_2.00	Homo sapiens	NRGGTCRNV	BNYGACCYN	SELEX Yin et al.(2017) RARG_FL_Methyl-HT-SELEX	0.934	0.612
RARG M05651_2.00	Homo sapiens	DRGGTCAARRGGTCRN	NYGACCYYTTGACCYH	SELEX Yin et al.(2017) RARG_eDBD_Methyl-HT-SELEX_1	0.934	0.612
RARG M05652_2.00	Homo sapiens	DAGKTCRYGACCYY	RRGGTCRYGAMCTH	SELEX Yin et al.(2017) RARG_eDBD_Methyl-HT-SELEX_2	0.934	0.612
Rxra M00181_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Badis et al.(2009) Rxra_1035	0.931	0.612
RXRA M03408_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRA_1	0.931	0.612
RXRA M03409_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRA_2	0.931	0.612
RXRA M03410_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRA_3	0.931	0.612
RXRA M03411_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRA_4	0.931	0.612
Rxra M03421_2.00	Mus musculus	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) Rxra_1	0.931	0.612
Rxra M03422_2.00	Mus musculus	RGGTCATGACCY	RGGTCATGACCY	SELEX Jolma et al.(2013) Rxra_2	0.931	0.612
RXRA M05671_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRA_eDBD_HT-SELEX	0.931	0.612
RXRA M05882_2.00	Homo sapiens	VRGKTBAAAGGTYRH	DYRACCTTTVAMCYB	SMiLE-seq Isakova et al.(2017) RXRa	0.931	0.612
RXRA M07993_2.00	Homo sapiens	NRRGGTCA	TGACCYYN	ChIP-seq Gerstein et al.(2012) H1-hESC_RXRA_HudsonAlpha	0.931	0.612
RXRA M07994_2.00	Homo sapiens	DDNNMRRGGTCANDN	NHNTGACCYYKNNHH	ChIP-seq Gerstein et al.(2012) HepG2_RXRA_HudsonAlpha	0.931	0.612
RXRA M09294_2.00	Homo sapiens	VDDDNDNNVRRRGGKCAVDV	BHBTGMCCYYYBNNHNHHHB	Misc Kulakovskiy et al.(2013) RXRA_HUMAN.H11MO.0.A	0.931	0.612
Rxra M09306_2.00	Mus musculus	DDVNNNNNRAGKTCAAGGYCA	TGRCCTTGAMCTYNNNNNBHH	Misc Kulakovskiy et al.(2013) RXRA_MOUSE.H11MO.0.A	0.931	0.612
RXRA M11182_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RXRA_07	0.931	0.612
RXRA M05672_2.00	Homo sapiens	RRGGTCAAAGGTCAH	DTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRA_eDBD_Methyl-HT-SELEX	0.931	0.612
Nr2f6 M00811_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Weirauch et al.(2013) pTH2193	0.930	0.582
Nr2f6 M03419_2.00	Mus musculus	RAGGTCAADAGGTCA	TGACCTHTTGACCTY	SELEX Jolma et al.(2013) Nr2f6_1	0.930	0.582
Nr2f6 M03420_2.00	Mus musculus	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) Nr2f6_2	0.930	0.582
Rxrb M02402_2.00	Mus musculus	VRGGTCAH	DTGACCYB	PBM Weirauch et al.(2014) pTH2861	0.930	0.612
RXRB M03415_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRB_1	0.930	0.612
Rxrb M03435_2.00	Mus musculus	GRGGTCAAAGGTCA	TGACCTTTGACCYC	SELEX Jolma et al.(2013) Rxrb_1	0.930	0.612
RXRB M05681_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_HT-SELEX_1	0.930	0.612
RXRB M05682_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_HT-SELEX_2	0.930	0.612
RXRB M09297_2.00	Homo sapiens	DSAGGTCASD	HSTGACCTSH	Misc Kulakovskiy et al.(2013) RXRB_HUMAN.H11MO.0.C	0.930	0.612
Rxrb M09330_2.00	Mus musculus	DSAGGTCASD	HSTGACCTSH	Misc Kulakovskiy et al.(2013) RXRB_MOUSE.H11MO.0.C	0.930	0.612
RXRB M05683_2.00	Homo sapiens	RRGGTCAAAGGTCRN	NYGACCTTTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_Methyl-HT-SELEX_1	0.930	0.612
RXRB M05684_2.00	Homo sapiens	RRGGTCRYGACCYY	RRGGTCRYGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_Methyl-HT-SELEX_2	0.930	0.612
Eip78C M06427_2.00	Drosophila melanogaster	RGGTCA	TGACCY	B1H Zhu et al.(2011) Eip78C_SANGER_5_FBgn0004865	0.923	0.642
CBG17178 M02392_2.00	Caenorhabditis briggsae	RAGGTCAH	DTGACCTY	PBM Weirauch et al.(2014) pTH6634	0.919	0.657
sex-1 M02416_2.00	Caenorhabditis elegans	RAGGTCAH	DTGACCTY	PBM Weirauch et al.(2014) pTH5667	0.919	0.627
AAEL009588 M02388_2.00	Aedes aegypti	NRGGTCR	YGACCYN	PBM Weirauch et al.(2014) pTH5508	0.914	0.612
Hr46 M02406_2.00	Drosophila melanogaster	NRGGTCAN	NTGACCYN	PBM Weirauch et al.(2014) pTH6142	0.914	0.612
Hr46 M03926_2.00	Drosophila melanogaster	RGGTCAGTRGGTCA	TGACCYACTGACCY	SELEX Nitta et al.(2015) Hr46_1	0.914	0.612
Hr46 M06412_2.00	Drosophila melanogaster	AWKTGGGTYW	WRACCCAMWT	B1H Zhu et al.(2011) Hr46_FlyReg_FBgn0000448	0.914	0.612
Hr46 M06413_2.00	Drosophila melanogaster	HWNBAGGTCA	TGACCTVNWD	B1H Zhu et al.(2011) Hr46_SANGER_5_FBgn0000448	0.914	0.612
Nr2c1 M00812_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Weirauch et al.(2013) pTH1284	0.912	0.567
Nr2c1 M02399_2.00	Mus musculus	RRGGTCAH	DTGACCYY	PBM Weirauch et al.(2014) pTH3466	0.912	0.567
NR2C1 M05597_2.00	Homo sapiens	NRGKKCRYGAMMYN	NRKKTCRYGMMCYN	SELEX Yin et al.(2017) NR2C1_eDBD_HT-SELEX_1	0.912	0.567
NR2C1 M05598_2.00	Homo sapiens	NRRGGTCAN	NTGACCYYN	SELEX Yin et al.(2017) NR2C1_eDBD_HT-SELEX_2	0.912	0.567
NR2C1 M09273_2.00	Homo sapiens	RBYVRVAGGTCAB	VTGACCTBYBRVY	Misc Kulakovskiy et al.(2013) NR2C1_HUMAN.H11MO.0.C	0.912	0.567
Nr2c1 M09304_2.00	Mus musculus	RBYVRVAGGTCAB	VTGACCTBYBRVY	Misc Kulakovskiy et al.(2013) NR2C1_MOUSE.H11MO.0.C	0.912	0.567
NR2C1 M05599_2.00	Homo sapiens	NRRGGTCAN	NTGACCYYN	SELEX Yin et al.(2017) NR2C1_eDBD_Methyl-HT-SELEX_1	0.912	0.567
NR2C1 M05600_2.00	Homo sapiens	RRGGTCRYGACCYY	RRGGTCRYGACCYY	SELEX Yin et al.(2017) NR2C1_eDBD_Methyl-HT-SELEX_2	0.912	0.567
RORC M05621_2.00	Homo sapiens	KRGGTCAYGMCCYM	KRGGKCRTGACCYM	SELEX Yin et al.(2017) RORC_eDBD_HT-SELEX_1	0.903	0.612
RORC M05622_2.00	Homo sapiens	NAWNKRGGTYANTRGGTCAN	NTGACCYANTRACCYMNWTN	SELEX Yin et al.(2017) RORC_eDBD_HT-SELEX_2	0.903	0.612
RORC M05880_2.00	Homo sapiens	NDAWNTRGGKCA	TGMCCYANWTHN	SMiLE-seq Isakova et al.(2017) RORc	0.903	0.612
RORC M09282_2.00	Homo sapiens	NDAWSTRRGTCA	TGACYYASWTHN	Misc Kulakovskiy et al.(2013) RORG_HUMAN.H11MO.0.C	0.903	0.612
RORC M05623_2.00	Homo sapiens	TRGGTCAYGACCYA	TRGGTCRTGACCYA	SELEX Yin et al.(2017) RORC_eDBD_Methyl-HT-SELEX_1	0.903	0.612
RORC M05624_2.00	Homo sapiens	NAWNTRGGTYASTAGGTCAN	NTGACCTASTRACCYANWTN	SELEX Yin et al.(2017) RORC_eDBD_Methyl-HT-SELEX_2	0.903	0.612
Eip75B M03928_2.00	Drosophila melanogaster	MWVTAGGTCANN	NNTGACCTABWK	SELEX Nitta et al.(2015) Eip75B_1	0.902	0.657
Eip75B M03929_2.00	Drosophila melanogaster	AWNTRGGTCANTRGGTCA	TGACCYANTGACCYANWT	SELEX Nitta et al.(2015) Eip75B_2	0.902	0.657
Eip75B M06416_2.00	Drosophila melanogaster	KWWNTRGGTCA	TGACCYANWWM	B1H Zhu et al.(2011) Eip75B_SANGER_5_FBgn0000568	0.902	0.657
Smp_105090 M02412_2.00	Schistosoma mansoni	RGGTCANN	NNTGACCY	PBM Weirauch et al.(2014) pTH6174	0.897	0.597
Rorc M09324_2.00	Mus musculus	NDAWSTRRGTCA	TGACYYASWTHN	Misc Kulakovskiy et al.(2013) RORG_MOUSE.H11MO.0.B	0.897	0.597
Rorc M09617_2.00	Mus musculus	AWBTRGGTCA	TGACCYAVWT	Misc Heinz et al.(2010) EL4-RORgt.Flag_GSE56019	0.897	0.597
nr2f2 M02393_2.00	Danio rerio	NNRGGTCAN	NTGACCYNN	PBM Weirauch et al.(2014) pTH5882	0.891	0.582
Nr2f1 M00822_2.00	Mus musculus	DRGGTCRN	NYGACCYH	PBM Weirauch et al.(2013) pTH3811	0.891	0.582
NR2F1 M03403_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Jolma et al.(2013) NR2F1_1	0.891	0.582
NR2F1 M03404_2.00	Homo sapiens	RRGGTCAARAGGTCAN	NTGACCTYTTGACCYY	SELEX Jolma et al.(2013) NR2F1_2	0.891	0.582
NR2F1 M03405_2.00	Homo sapiens	RRGGTCAN	NTGACCYY	SELEX Jolma et al.(2013) NR2F1_3	0.891	0.582
NR2F1 M03406_2.00	Homo sapiens	NHRRGGTCANVNG	CNBNTGACCYYDN	SELEX Jolma et al.(2013) NR2F1_4	0.891	0.582
NR2F1 M05661_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_HT-SELEX_1	0.891	0.582
NR2F1 M05662_2.00	Homo sapiens	VRGGTCANYGACCYY	RRGGTCRNTGACCYB	SELEX Yin et al.(2017) NR2F1_eDBD_HT-SELEX_2	0.891	0.582
NR2F1 M05665_2.00	Homo sapiens	VRGGTCAAAGGTCAN	NTGACCTTTGACCYB	SELEX Yin et al.(2017) NR2F1_FL_HT-SELEX_1	0.891	0.582
NR2F1 M05666_2.00	Homo sapiens	RRGGTCANYGACCYY	RRGGTCRNTGACCYY	SELEX Yin et al.(2017) NR2F1_FL_HT-SELEX_2	0.891	0.582
NR2F1 M09291_2.00	Homo sapiens	NRRRBSRRRGGKCANVN	NBNTGMCCYYYSVYYYN	Misc Kulakovskiy et al.(2013) COT1_HUMAN.H11MO.0.C	0.891	0.582
Nr2f1 M09334_2.00	Mus musculus	YARAGGTCA	TGACCTYTR	Misc Kulakovskiy et al.(2013) COT1_MOUSE.H11MO.0.B	0.891	0.582
NR2F1 M11172_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$COUPTF1_Q6_01	0.891	0.582
NR2F1 M05663_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_Methyl-HT-SELEX_1	0.891	0.582
NR2F1 M05664_2.00	Homo sapiens	NRGGTCANYGACCYH	DRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_Methyl-HT-SELEX_2	0.891	0.582
NR2F1 M05667_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_FL_Methyl-HT-SELEX_1	0.891	0.582
NR2F1 M05668_2.00	Homo sapiens	RRGGTCRNYGACCYY	RRGGTCRNYGACCYY	SELEX Yin et al.(2017) NR2F1_FL_Methyl-HT-SELEX_2	0.891	0.582
Rora M00819_2.00	Mus musculus	NNRGGTCA	TGACCYNN	PBM Weirauch et al.(2013) pTH3464	0.889	0.612
RORA M03353_2.00	Homo sapiens	NMRAGGTCAAVYYVAGGTCA	TGACCTBRRBTTGACCTYKN	SELEX Jolma et al.(2013) RORA_1	0.889	0.612
RORA M03354_2.00	Homo sapiens	WAWSTRGGTYASTAGGTCA	TGACCTASTRACCYASWTW	SELEX Jolma et al.(2013) RORA_2	0.889	0.612
RORA M02705_2.00	Homo sapiens	WWVDAGGTCA	TGACCTHBWW	SELEX Mathelier et al.(2014) MA0071.1	0.889	0.612
RORA M02706_2.00	Homo sapiens	NDWAWBTAGGTCAN	NTGACCTAVWTWHN	SELEX Mathelier et al.(2014) MA0072.1	0.889	0.612
RORA M09265_2.00	Homo sapiens	VWNDRGGBCARDR	YHYTGVCCYHNWB	Misc Kulakovskiy et al.(2013) RORA_HUMAN.H11MO.0.C	0.889	0.612
Rora M09327_2.00	Mus musculus	VWNDRGGBCARDR	YHYTGVCCYHNWB	Misc Kulakovskiy et al.(2013) RORA_MOUSE.H11MO.0.C	0.889	0.612
RORA M11090_2.00	Homo sapiens	DWWWVDAGGTCAH	DTGACCTHBWWWH	Transfac Matys et al.(2006) V$RORA1_01	0.889	0.612
RORA M11091_2.00	Homo sapiens	DWAWBTAGGTCAN	NTGACCTAVWTWH	Transfac Matys et al.(2006) V$RORA2_01	0.889	0.612
RORA M11092_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORALPHA_Q4	0.889	0.612
RORA M11093_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORA_Q4	0.889	0.612
Nr2f2 M00184_2.00	Mus musculus	RRGGTCAN	NTGACCYY	PBM Badis et al.(2009) Nr2f2_2192	0.889	0.582
NR2F2 M08157_2.00	Homo sapiens	NNAAGGTCANN	NNTGACCTTNN	ChIP-seq Mathelier et al.(2014) MA1111.1	0.889	0.582
NR2F2 M08223_2.00	Homo sapiens	AAAGGTCA	TGACCTTT	ChIP-seq Contrino et al.(2012) Mv102	0.889	0.582
NR2F2 M08224_2.00	Homo sapiens	GGKCARAGGB	VCCTYTGMCC	ChIP-seq Contrino et al.(2012) Mv104	0.889	0.582
NR2F2 M09293_2.00	Homo sapiens	NARRGGTCADRDN	NHYHTGACCYYTN	Misc Kulakovskiy et al.(2013) COT2_HUMAN.H11MO.0.A	0.889	0.582
Nr2f2 M09325_2.00	Mus musculus	NNHRAGGTCANVD	HBNTGACCTYDNN	Misc Kulakovskiy et al.(2013) COT2_MOUSE.H11MO.0.A	0.889	0.582
NR2F2 M11180_2.00	Homo sapiens	WRRKKTCAARGGYTCA	TGARCCYTTGAMMYYW	Transfac Matys et al.(2006) V$ARP1_01	0.889	0.582
NR2F2 M11181_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$COUPTF2_Q6	0.889	0.582
NR2F6 M02396_2.00	Homo sapiens	NNRGGTCR	YGACCYNN	PBM Weirauch et al.(2014) pTH6747	0.888	0.567
NR2F6 M03386_2.00	Homo sapiens	RRGGTCAAAAGGTCA	TGACCTTTTGACCYY	SELEX Jolma et al.(2013) NR2F6_1	0.888	0.567
NR2F6 M03387_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) NR2F6_2	0.888	0.567
NR2F6 M03388_2.00	Homo sapiens	NRGGTCAAAGGTCA	TGACCTTTGACCYN	SELEX Jolma et al.(2013) NR2F6_3	0.888	0.567
NR2F6 M05641_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) NR2F6_eDBD_HT-SELEX_1	0.888	0.567
NR2F6 M05642_2.00	Homo sapiens	RAGGTCANTGACCTY	RAGGTCANTGACCTY	SELEX Yin et al.(2017) NR2F6_eDBD_HT-SELEX_2	0.888	0.567
NR2F6 M05645_2.00	Homo sapiens	NRGGTCARAGGTCRN	NYGACCTYTGACCYN	SELEX Yin et al.(2017) NR2F6_FL_HT-SELEX_1	0.888	0.567
NR2F6 M05646_2.00	Homo sapiens	NRGGTCANYGACCYY	RRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F6_FL_HT-SELEX_2	0.888	0.567
NR2F6 M11153_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EAR2_Q2	0.888	0.567
NR2F6 M11154_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EAR2_Q4	0.888	0.567
NR2F6 M05643_2.00	Homo sapiens	RRGGTCAAAGGTCRN	NYGACCTTTGACCYY	SELEX Yin et al.(2017) NR2F6_eDBD_Methyl-HT-SELEX_1	0.888	0.567
NR2F6 M05644_2.00	Homo sapiens	RRGGTCRNYGACCYY	RRGGTCRNYGACCYY	SELEX Yin et al.(2017) NR2F6_eDBD_Methyl-HT-SELEX_2	0.888	0.567
NR2F6 M05647_2.00	Homo sapiens	NRGGTYADRGGKBRN	NYVMCCYHTRACCYN	SELEX Yin et al.(2017) NR2F6_FL_Methyl-HT-SELEX_1	0.888	0.567
NR2F6 M05648_2.00	Homo sapiens	NRGGTCANYGACCYN	NRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F6_FL_Methyl-HT-SELEX_2	0.888	0.567
Rorb M00820_2.00	Mus musculus	NRGGTCANN	NNTGACCYN	PBM Weirauch et al.(2013) pTH3469	0.887	0.612
rorb M02404_2.00	Tetraodon nigroviridis	NGAGGTCANN	NNTGACCTCN	PBM Weirauch et al.(2014) pTH6589	0.887	0.612
RORB M05677_2.00	Homo sapiens	DAWNTRGGTYAGTRGGTCAN	NTGACCYACTRACCYANWTH	SELEX Yin et al.(2017) RORB_eDBD_HT-SELEX_1	0.887	0.612
RORB M05678_2.00	Homo sapiens	NAWNKRGGTCAYGACCYMNWTN	NAWNKRGGTCRTGACCYMNWTN	SELEX Yin et al.(2017) RORB_eDBD_HT-SELEX_2	0.887	0.612
RORB M05883_2.00	Homo sapiens	AWNBRGGTCAN	NTGACCYVNWT	SMiLE-seq Isakova et al.(2017) RORb	0.887	0.612
RORB M11187_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORBETA_Q2	0.887	0.612
RORB M05679_2.00	Homo sapiens	DAWBTRGGTYAGTRGGTCRN	NYGACCYACTRACCYAVWTH	SELEX Yin et al.(2017) RORB_eDBD_Methyl-HT-SELEX_1	0.887	0.612
RORB M05680_2.00	Homo sapiens	NAWNKRGGTCAYGACCYMNWTN	NAWNKRGGTCRTGACCYMNWTN	SELEX Yin et al.(2017) RORB_eDBD_Methyl-HT-SELEX_2	0.887	0.612
svp M06423_2.00	Drosophila melanogaster	ARGGTCA	TGACCYK	B1H Zhu et al.(2011) svp_SANGER_5_FBgn0003651	0.886	0.552
RORC M02405_2.00	Tetraodon nigroviridis	NGAGGTCANN	NNTGACCTCN	PBM Weirauch et al.(2014) pTH6612	0.884	0.597
O77476_BRUPA M02422_2.00	Brugia pahangi	NRGGTCAN	NTGACCYN	PBM Weirauch et al.(2014) pTH6019	0.875	0.552
NR2C2 M03407_2.00	Homo sapiens	VRGGTCAAAGGTCA	TGACCTTTGACCYB	SELEX Jolma et al.(2013) NR2C2_1	0.875	0.567
NR2C2 M05669_2.00	Homo sapiens	NRGGTCRN	NYGACCYN	SELEX Yin et al.(2017) NR2C2_eDBD_HT-SELEX	0.875	0.567
NR2C2 M08156_2.00	Homo sapiens	NVRGGTCARAGGKCA	TGMCCTYTGACCYBN	ChIP-seq Mathelier et al.(2014) MA0504.1	0.875	0.567
NR2C2 M07990_2.00	Homo sapiens	WBYRCTTCCGGGKYV	BRMCCCGGAAGYRVW	ChIP-seq Gerstein et al.(2012) HeLa-S3_TR4_UCD	0.875	0.567
NR2C2 M07991_2.00	Homo sapiens	DWBYRCTTCCGGGKY	RMCCCGGAAGYRVWH	ChIP-seq Gerstein et al.(2012) HepG2b_TR4_UCD	0.875	0.567
NR2C2 M07992_2.00	Homo sapiens	WBYRCTTCCGGGKYR	YRMCCCGGAAGYRVW	ChIP-seq Gerstein et al.(2012) K562b_TR4_UCD	0.875	0.567
NR2C2 M08221_2.00	Homo sapiens	DWBYDCTTCCGGGKY	RMCCCGGAAGHRVWH	ChIP-seq Contrino et al.(2012) Mv97	0.875	0.567
NR2C2 M08222_2.00	Homo sapiens	TCARAGGTCA	TGACCTYTGA	ChIP-seq Contrino et al.(2012) Mv98	0.875	0.567
NR2C2 M09292_2.00	Homo sapiens	RBTYMVRGGTCR	YGACCYBKRAVY	Misc Kulakovskiy et al.(2013) NR2C2_HUMAN.H11MO.0.B	0.875	0.567
NR2C2 M09611_2.00	Homo sapiens	RRGGTCARAGGTCA	TGACCTYTGACCYY	Misc Heinz et al.(2010) Hela-TR4_GSE24685	0.875	0.567
NR2C2 M11173_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR2C2_03	0.875	0.567
NR2C2 M11174_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR2C2_04	0.875	0.567
NR2C2 M11175_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_01	0.875	0.567
NR2C2 M11176_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_03	0.875	0.567
NR2C2 M11177_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_Q2_01	0.875	0.567
NR2C2 M11178_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_Q2	0.875	0.567
NR2C2 M11179_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_Q3	0.875	0.567
NR2C2 M05670_2.00	Homo sapiens	NRGGTCRN	NYGACCYN	SELEX Yin et al.(2017) NR2C2_eDBD_Methyl-HT-SELEX	0.875	0.567
Nr2c2 M09303_2.00	Mus musculus	RRGKSARAGGKCA	TGMCCTYTSMCYY	Misc Kulakovskiy et al.(2013) NR2C2_MOUSE.H11MO.0.A	0.875	0.552
Q95WG3_ACRMI M02424_2.00	Acropora millepora	NRAGGTCAN	NTGACCTYN	PBM Weirauch et al.(2014) pTH6144	0.874	0.567
Hr4 M06435_2.00	Drosophila melanogaster	AAGGTCA	TGACCTT	B1H Zhu et al.(2011) Hr4_SANGER_5_FBgn0023546	0.865	0.537
Q969A9_BOMMO M02410_2.00	Bombyx mori	VRGGTCDN	NHGACCYB	PBM Weirauch et al.(2014) pTH5516	0.855	0.537
Hr78 M06430_2.00	Drosophila melanogaster	HVAGGTCA	TGACCTBD	B1H Zhu et al.(2011) Hr78_SANGER_5_FBgn0015239	0.830	0.552
NR1D2 M05659_2.00	Homo sapiens	DWWNKRKGTYANTRKGTYRN	NYRACMYANTRACMYMNWWH	SELEX Yin et al.(2017) NR1D2_eDBD_HT-SELEX	0.805	0.672
Nr1d2 M09313_2.00	Mus musculus	NVRDVWVTRRGTCANDVDN	NHBHNTGACYYABWBHYBN	Misc Kulakovskiy et al.(2013) NR1D2_MOUSE.H11MO.0.A	0.805	0.672
NR1D2 M05660_2.00	Homo sapiens	NWWNBRGGKYAVTRGGKCRN	NYGMCCYABTRMCCYVNWWN	SELEX Yin et al.(2017) NR1D2_eDBD_Methyl-HT-SELEX	0.805	0.672
NR1D1 M05605_2.00	Homo sapiens	NWWNTRGGTYASTRGGTCAN	NTGACCYASTRACCYANWWN	SELEX Yin et al.(2017) NR1D1_eDBD_HT-SELEX	0.797	0.657
NR1D1 M09276_2.00	Homo sapiens	DRVNMASTGGGNCANDNDN	NHNHNTGNCCCASTKNBYH	Misc Kulakovskiy et al.(2013) NR1D1_HUMAN.H11MO.0.B	0.797	0.657
Nr1d1 M09310_2.00	Mus musculus	DRVNMASTGGGNCANDNDN	NHNHNTGNCCCASTKNBYH	Misc Kulakovskiy et al.(2013) NR1D1_MOUSE.H11MO.0.A	0.797	0.657
NR1D1 M11136_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$REVERBALPHA_Q6	0.797	0.657
NR1D1 M05606_2.00	Homo sapiens	NAWNKRGGTYAGTRGGTCRN	NYGACCYACTRACCYMNWTN	SELEX Yin et al.(2017) NR1D1_eDBD_Methyl-HT-SELEX	0.797	0.657
ftz-f1 M02407_2.00	Drosophila melanogaster	RRGGTCAH	DTGACCYY	PBM Weirauch et al.(2014) pTH5709	0.766	0.567
ftz-f1 M06417_2.00	Drosophila melanogaster	MMRKYYSAAGGWCRCYGM	KCRGYGWCCTTSRRMYKK	B1H Zhu et al.(2011) ftz-f1_FlyReg_FBgn0001078	0.766	0.567
ftz-f1 M06418_2.00	Drosophila melanogaster	AAGGTCA	TGACCTT	B1H Zhu et al.(2011) ftz-f1_SANGER_5_FBgn0001078	0.766	0.567
NR4A1 M05601_2.00	Homo sapiens	NAAAGGTCAN	NTGACCTTTN	SELEX Yin et al.(2017) NR4A1_eDBD_HT-SELEX_1	0.763	0.567
NR4A1 M05602_2.00	Homo sapiens	NAAAGGTCAN	NTGACCTTTN	SELEX Yin et al.(2017) NR4A1_eDBD_HT-SELEX_2	0.763	0.567
NR4A1 M08153_2.00	Homo sapiens	NAAAGGTCAN	NTGACCTTTN	ChIP-seq Mathelier et al.(2014) MA1112.1	0.763	0.567
NR4A1 M09274_2.00	Homo sapiens	AAAKGBCAN	NTGVCMTTT	Misc Kulakovskiy et al.(2013) NR4A1_HUMAN.H11MO.0.A	0.763	0.567
Nr4a1 M09317_2.00	Mus musculus	NRAADGKCA	TGMCHTTYN	Misc Kulakovskiy et al.(2013) NR4A1_MOUSE.H11MO.0.B	0.763	0.567
NR4A1 M09608_2.00	Homo sapiens	NNDNAAAGGTCA	TGACCTTTNHNN	Misc Heinz et al.(2010) K562-NR4A1_GSE31363	0.763	0.567
NR4A1 M11132_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NUR77_Q5_01	0.763	0.567
NR4A1 M11133_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NUR77_Q5_02	0.763	0.567
NR4A1 M11134_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NUR77_Q5	0.763	0.567
NR4A1 M05603_2.00	Homo sapiens	NAAAGGTCRN	NYGACCTTTN	SELEX Yin et al.(2017) NR4A1_eDBD_Methyl-HT-SELEX_1	0.763	0.567
NR4A1 M05604_2.00	Homo sapiens	NAAAGGTCRN	NYGACCTTTN	SELEX Yin et al.(2017) NR4A1_eDBD_Methyl-HT-SELEX_2	0.763	0.567
NR5A2 M05589_2.00	Homo sapiens	YCAAGGYCRYGRCCTTSR	YSAAGGYCRYGRCCTTGR	SELEX Yin et al.(2017) NR5A2_eDBD_HT-SELEX_1	0.756	0.582
NR5A2 M05590_2.00	Homo sapiens	NYCAAGGTCAH	DTGACCTTGRN	SELEX Yin et al.(2017) NR5A2_eDBD_HT-SELEX_2	0.756	0.582
NR5A2 M05591_2.00	Homo sapiens	YGRCCTTSVNYSAAGGYCR	YGRCCTTSRNBSAAGGYCR	SELEX Yin et al.(2017) NR5A2_eDBD_HT-SELEX_3	0.756	0.582
NR5A2 M09271_2.00	Homo sapiens	NBYCAAGGYCA	TGRCCTTGRVN	Misc Kulakovskiy et al.(2013) NR5A2_HUMAN.H11MO.0.B	0.756	0.582
NR5A2 M11126_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LRH1_Q5_01	0.756	0.582
NR5A2 M11127_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LRH1_Q5	0.756	0.582
NR5A2 M11128_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LRH1_Q6	0.756	0.582
NR5A2 M05592_2.00	Homo sapiens	YCAAGGYCRYGACCTTSR	YSAAGGTCRYGRCCTTGR	SELEX Yin et al.(2017) NR5A2_eDBD_Methyl-HT-SELEX_1	0.756	0.582
NR5A2 M05593_2.00	Homo sapiens	NYCAAGGTCRH	DYGACCTTGRN	SELEX Yin et al.(2017) NR5A2_eDBD_Methyl-HT-SELEX_2	0.756	0.582
NR5A2 M05594_2.00	Homo sapiens	YGRCCTTSVNBSAAGGYCR	YGRCCTTSVNBSAAGGYCR	SELEX Yin et al.(2017) NR5A2_eDBD_Methyl-HT-SELEX_3	0.756	0.582
THRA M03368_2.00	Homo sapiens	DTGACCTYATVAGGTCAH	DTGACCTBATRAGGTCAH	SELEX Jolma et al.(2013) THRA_1	0.755	0.582
THRA M09275_2.00	Homo sapiens	RGKWSDNNYVAGGWSAN	NTSWCCTBRNNHSWMCY	Misc Kulakovskiy et al.(2013) THA_HUMAN.H11MO.0.C	0.755	0.582
Thra M09333_2.00	Mus musculus	VRGGKCANNYVRGGHCA	TGDCCYBRNNTGMCCYB	Misc Kulakovskiy et al.(2013) THA_MOUSE.H11MO.0.C	0.755	0.582
Thra M09619_2.00	Mus musculus	GGKCANNYVRGGHCA	TGDCCYBRNNTGMCC	Misc Heinz et al.(2010) C17.2-THRa_GSE38347	0.755	0.582
GAG_AVIER M11193_2.00	Avian erythroblastosis virus	VHNTRAGGTCACSSNN	NNSSGTGACCTYANDB	Transfac Matys et al.(2006) V$T3R_01	0.755	0.582
THRA M11135_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$T3RALPHA_Q6	0.755	0.582
NR6A1 M05627_2.00	Homo sapiens	NNSAAGKTCAAGKKYRN	NYRMMCTTGAMCTTSNN	SELEX Yin et al.(2017) NR6A1_eDBD_HT-SELEX	0.752	0.537
NR6A1 M09284_2.00	Homo sapiens	AAGKTCAAGKTCA	TGAMCTTGAMCTT	Misc Kulakovskiy et al.(2013) NR6A1_HUMAN.H11MO.0.B	0.752	0.537
NR6A1 M11148_2.00	Homo sapiens	NKCAAGKTCAAGKTCANN	NNTGAMCTTGAMCTTGMN	Transfac Matys et al.(2006) V$GCNF_01	0.752	0.537
NR6A1 M11149_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$GCNF_Q3	0.752	0.537
NR6A1 M05628_2.00	Homo sapiens	NYSAAGKTCAAGKKCRN	NYGMMCTTGAMCTTSRN	SELEX Yin et al.(2017) NR6A1_eDBD_Methyl-HT-SELEX	0.752	0.537
For this family, TFs with SR scores > 0.745* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMGAP00000014635	Nuclear receptor	100	167	IECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLIYDKCDRNCKIQKNRNKCQYCRFQKCLSVGMSH
ENSMGAP00000017586	Nuclear receptor	100	167	IECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLIYDKCDRNCKIQKNRNKCQYCRFQKCLSVGMSH

Links
Other Nuclear receptor family TFs
Other *Meleagris gallopavo* TFs

2403 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BIM2	Arabidopsis thaliana	AT1G69010	D	0.000
BIM1	Arabidopsis thaliana	AT5G08130	D	0.000
BIM3	Arabidopsis thaliana	AT5G38860	D	0.000
fgenesh1_pg.scaffold_37000071	Physcomitrella patens	fgenesh1_pg.scaffold_37000071	D	0.000
Carubv10028570m.g	Capsella rubella	Carubv10028570m.g	I	0.000
Aquca_002_00952	Aquilegia coerulea	Aquca_002_00952	I	0.000
mgf013208m	Mimulus guttatus	mgf013208m	I	0.000
mgf011829m	Mimulus guttatus	mgf011829m	I	0.000
mgf005849m	Mimulus guttatus	mgf005849m	I	0.000
mgf001137m	Mimulus guttatus	mgf001137m	I	0.000
gw1.90.123.1	Physcomitrella patens	gw1.90.123.1	I	0.000
Aquca_006_00387	Aquilegia coerulea	Aquca_006_00387	I	0.000
Bostr.0568s0133	Boechera stricta	Bostr.0568s0133	I	0.000
Bostr.10273s0468	Boechera stricta	Bostr.10273s0468	I	0.000
Bostr.13129s0152	Boechera stricta	Bostr.13129s0152	I	0.000
Cagra.1157s0023	Capsella grandiflora	Cagra.1157s0023	I	0.000
Cagra.1365s0019	Capsella grandiflora	Cagra.1365s0019	I	0.000
Cagra.2539s0002	Capsella grandiflora	Cagra.2539s0002	I	0.000
Carubv10000655m.g	Capsella rubella	Carubv10000655m.g	I	0.000
Carubv10006445m.g	Capsella rubella	Carubv10006445m.g	I	0.000
Carubv10020679m.g	Capsella rubella	Carubv10020679m.g	I	0.000
estExt_fgenesh1_pg.C_2110039	Physcomitrella patens	estExt_fgenesh1_pg.C_2110039	I	0.000
Cucsa.328060	Cucumis sativus	Cucsa.328060	I	0.000
Cucsa.198520	Cucumis sativus	Cucsa.198520	I	0.000
BIM3	Vitis vinifera	VIT_14s0083g00930	I	0.000
BIM1	Vitis vinifera	VIT_17s0000g04790	I	0.000
Ca_19269	Cicer arietinum	Ca_19269	I	0.000
Ca_22043	Cicer arietinum	Ca_22043	I	0.000
Cla018818	Citrullus lanatus	Cla018818	I	0.000
Cla022382	Citrullus lanatus	Cla022382	I	0.000
29790.m000843	Ricinus communis	29790.m000843	I	0.000
30138.m003899	Ricinus communis	30138.m003899	I	0.000
30138.m003913	Ricinus communis	30138.m003913	I	0.000
cassava14.valid.m1	Manihot esculenta	cassava14.valid.m1	I	0.000
cassava15.valid.m1	Manihot esculenta	cassava15.valid.m1	I	0.000
cassava29314.valid.m1	Manihot esculenta	cassava29314.valid.m1	I	0.000
cassava29318.valid.m1	Manihot esculenta	cassava29318.valid.m1	I	0.000
cassava43370.valid.m1	Manihot esculenta	cassava43370.valid.m1	I	0.000
cassava43379.valid.m1	Manihot esculenta	cassava43379.valid.m1	I	0.000
Cucsa.113490	Cucumis sativus	Cucsa.113490	I	0.000
Cucsa.174600	Cucumis sativus	Cucsa.174600	I	0.000
BIM2	Vitis vinifera	VIT_01s0010g00540	I	0.000
Ciclev10012135m.g	Citrus clementina	Ciclev10012135m.g	I	0.000
Ciclev10020248m.g	Citrus clementina	Ciclev10020248m.g	I	0.000
orange1.1g038451m.g	Citrus sinensis	orange1.1g038451m.g	I	0.000
Pavir.Fb01833	Panicum virgatum	Pavir.Fb01833	I	0.000
Pavir.J15575	Panicum virgatum	Pavir.J15575	I	0.000
Pavir.J38250	Panicum virgatum	Pavir.J38250	I	0.000
Pavir.J38910	Panicum virgatum	Pavir.J38910	I	0.000
SapurV1A.0060s0510	Salix purpurea	SapurV1A.0060s0510	I	0.000
SapurV1A.0084s0570	Salix purpurea	SapurV1A.0084s0570	I	0.000
SapurV1A.0178s0150	Salix purpurea	SapurV1A.0178s0150	I	0.000
SapurV1A.0274s0040	Salix purpurea	SapurV1A.0274s0040	I	0.000
SapurV1A.0868s0010	Salix purpurea	SapurV1A.0868s0010	I	0.000
SapurV1A.2517s0020	Salix purpurea	SapurV1A.2517s0020	I	0.000
Thhalv10004889m.g	Eutrema salsugineum	Thhalv10004889m.g	I	0.000
Thhalv10013181m.g	Eutrema salsugineum	Thhalv10013181m.g	I	0.000
Thhalv10018889m.g	Eutrema salsugineum	Thhalv10018889m.g	I	0.000
Thhalv10027863m.g	Eutrema salsugineum	Thhalv10027863m.g	I	0.000
PK00238.1	Cannabis sativa	PK00238.1	I	0.000
PK01364.1	Cannabis sativa	PK01364.1	I	0.000
orange1.1g019960m.g	Citrus sinensis	orange1.1g019960m.g	I	0.000
orange1.1g019485m.g	Citrus sinensis	orange1.1g019485m.g	I	0.000
MDP0000261293	Malus domestica	MDP0000261293	I	0.000
Ciclev10032020m.g	Citrus clementina	Ciclev10032020m.g	I	0.000
Eucgr.B00645	Eucalyptus grandis	Eucgr.B00645	I	0.000
Eucgr.B03113	Eucalyptus grandis	Eucgr.B03113	I	0.000
Eucgr.I02069	Eucalyptus grandis	Eucgr.I02069	I	0.000
evm.TU.supercontig_289.6	Carica papaya	evm.TU.supercontig_289.6	I	0.000
evm.TU.supercontig_3.225	Carica papaya	evm.TU.supercontig_3.225	I	0.000
gene04534-v1.0-hybrid	Fragaria vesca	gene04534-v1.0-hybrid	I	0.000
gene09125-v1.0-hybrid	Fragaria vesca	gene09125-v1.0-hybrid	I	0.000
gene26139-v1.0-hybrid	Fragaria vesca	gene26139-v1.0-hybrid	I	0.000
Gorai.001G197500	Gossypium raimondii	Gorai.001G197500	I	0.000
Gorai.006G269200	Gossypium raimondii	Gorai.006G269200	I	0.000
Gorai.007G040600	Gossypium raimondii	Gorai.007G040600	I	0.000
Gorai.009G327300	Gossypium raimondii	Gorai.009G327300	I	0.000
Gorai.013G098000	Gossypium raimondii	Gorai.013G098000	I	0.000
Lus10004630.g	Linum usitatissimum	Lus10004630.g	I	0.000
Lus10026684.g	Linum usitatissimum	Lus10026684.g	I	0.000
Lus10034358.g	Linum usitatissimum	Lus10034358.g	I	0.000
PK10562.1	Cannabis sativa	PK10562.1	I	0.000
TCM_019015	Theobroma cacao	TCM_019015	I	0.000
AMTR_s00006p00250310	Amborella trichopoda	AMTR_s00006p00250310	I	0.000
GSMUA_Achr9G19110_001	Musa acuminata	GSMUA_Achr9G19110_001	I	0.000
GSMUA_Achr4G19530_001	Musa acuminata	GSMUA_Achr4G19530_001	I	0.000
GSMUA_Achr2G05450_001	Musa acuminata	GSMUA_Achr2G05450_001	I	0.000
GRMZM2G172795	Zea mays	GRMZM2G172795	I	0.000
GRMZM2G017349	Zea mays	GRMZM2G017349	I	0.000
GLYMA17G08980	Glycine max	GLYMA17G08980	I	0.000
GLYMA08G28010	Glycine max	GLYMA08G28010	I	0.000
GLYMA05G07490	Glycine max	GLYMA05G07490	I	0.000
GSMUA_Achr9G28050_001	Musa acuminata	GSMUA_Achr9G28050_001	I	0.000
LPERR04G17400	Leersia perrieri	LPERR04G17400	I	0.000
OGLUM06G04430	Oryza glumaepatula	OGLUM06G04430	I	0.000
OBART06G04330	Oryza barthii	OBART06G04330	I	0.000
OB08G25940	Oryza brachyantha	OB08G25940	I	0.000
MTR_7g017320	Medicago truncatula	MTR_7g017320	I	0.000
MTR_5g048350	Medicago truncatula	MTR_5g048350	I	0.000
MTR_4g110040	Medicago truncatula	MTR_4g110040	I	0.000
MTR_1g019240	Medicago truncatula	MTR_1g019240	I	0.000
LPERR06G03910	Leersia perrieri	LPERR06G03910	I	0.000
GLYMA02G13670	Glycine max	GLYMA02G13670	I	0.000
GLYMA01G09010	Glycine max	GLYMA01G09010	I	0.000
Bo6g108530	Brassica oleracea	Bo6g108530	I	0.000
Bo5g020460	Brassica oleracea	Bo5g020460	I	0.000
Bo3g004690	Brassica oleracea	Bo3g004690	I	0.000
Bo2g161110	Brassica oleracea	Bo2g161110	I	0.000
Bo2g062560	Brassica oleracea	Bo2g062560	I	0.000
BGIOSGA028888	Oryza indica	BGIOSGA028888	I	0.000
BGIOSGA022375	Oryza indica	BGIOSGA022375	I	0.000
ALC	Arabidopsis thaliana	AT5G67110	I	0.000
Bo9g174770	Brassica oleracea	Bo9g174770	I	0.000
Bra004355	Brassica rapa	Bra004355	I	0.000
ALC	Arabidopsis lyrata	fgenesh2_kg.8__2705__AT5G67110.1	I	0.000
BIM2	Arabidopsis lyrata	fgenesh2_kg.2__1159__AT1G69010.1	I	0.000
BRADI3G38970	Brachypodium distachyon	BRADI3G38970	I	0.000
Bra038332	Brassica rapa	Bra038332	I	0.000
Bra029354	Brassica rapa	Bra029354	I	0.000
Bra012133	Brassica rapa	Bra012133	I	0.000
Bra009322	Brassica rapa	Bra009322	I	0.000
Bra005969	Brassica rapa	Bra005969	I	0.000
OGLUM08G19830	Oryza glumaepatula	OGLUM08G19830	I	0.000
OLONG_003583	Oryza longistaminata	OLONG_003583	I	0.000
SELMODRAFT_451475	Selaginella moellendorffii	SELMODRAFT_451475	I	0.000
BIM3	Arabidopsis lyrata	scaffold_704174.1	I	0.000
BIM1	Arabidopsis lyrata	scaffold_600819.1	I	0.000
Sb10g004500	Sorghum bicolor	Sb10g004500	I	0.000
Sb07g028860	Sorghum bicolor	Sb07g028860	I	0.000
Sb06g025060	Sorghum bicolor	Sb06g025060	I	0.000
Sb06g025040	Sorghum bicolor	Sb06g025040	I	0.000
PRUPE_ppa008856mg	Prunus persica	PRUPE_ppa008856mg	I	0.000
SELMODRAFT_451477	Selaginella moellendorffii	SELMODRAFT_451477	I	0.000
Si000845m.g	Setaria italica	Si000845m.g	I	0.000
TCM_014392	Theobroma cacao	TCM_014392	I	0.000
TCM_011433	Theobroma cacao	TCM_011433	I	0.000
Solyc06g069370.2	Solanum lycopersicum	Solyc06g069370.2	I	0.000
Solyc05g011810.2	Solanum lycopersicum	Solyc05g011810.2	I	0.000
Solyc04g005280.2	Solanum lycopersicum	Solyc04g005280.2	I	0.000
Solyc03g114720.2	Solanum lycopersicum	Solyc03g114720.2	I	0.000
Si013622m.g	Setaria italica	Si013622m.g	I	0.000
Si012401m.g	Setaria italica	Si012401m.g	I	0.000
PRUPE_ppa008387mg	Prunus persica	PRUPE_ppa008387mg	I	0.000
PRUPE_ppa003436mg	Prunus persica	PRUPE_ppa003436mg	I	0.000
ORUFI08G21030	Oryza rufipogon	ORUFI08G21030	I	0.000
ORUFI06G04330	Oryza rufipogon	ORUFI06G04330	I	0.000
ORGLA08G0164200	Oryza glaberrima	ORGLA08G0164200	I	0.000
ORGLA06G0039900	Oryza glaberrima	ORGLA06G0039900	I	0.000
OPUNC08G16820	Oryza punctata	OPUNC08G16820	I	0.000
ONIVA08G20800	Oryza nivara	ONIVA08G20800	I	0.000
ONIVA06G05510	Oryza nivara	ONIVA06G05510	I	0.000
OMERI06G05430	Oryza meridionalis	OMERI06G05430	I	0.000
OS08G0490000	Oryza sativa	OS08G0490000	I	0.000
PGSC0003DMG400001919	Solanum tuberosum	PGSC0003DMG400001919	I	0.000
POPTR_0017s13610	Populus trichocarpa	POPTR_0017s13610	I	0.000
POPTR_0015s03550	Populus trichocarpa	POPTR_0015s03550	I	0.000
POPTR_0012s06650	Populus trichocarpa	POPTR_0012s06650	I	0.000
POPTR_0010s14740	Populus trichocarpa	POPTR_0010s14740	I	0.000
POPTR_0008s11120	Populus trichocarpa	POPTR_0008s11120	I	0.000
POPTR_0004s11180	Populus trichocarpa	POPTR_0004s11180	I	0.000
PGSC0003DMG401007955	Solanum tuberosum	PGSC0003DMG401007955	I	0.000
PGSC0003DMG400019654	Solanum tuberosum	PGSC0003DMG400019654	I	0.000
Traes_7DL_04FC0BF21	Triticum aestivum	Traes_7DL_04FC0BF21	N	0.000

PPARA (Meleagris gallopavo) Nuclear receptor

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2403 Related TFs

PPARA **(Meleagris gallopavo)
Nuclear receptor**