NR1I2 (Myotis lucifugus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSMLUG00000002877 T303722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NR1I2
M03925_2.00
Homo sapiens
RGKKCRNNVRGKKCR

YGMMCYBNNYGMMCY
SELEX
Nitta et al.(2015)
NR1I2_1
0.987 0.957
NR1I2
M05625_2.00
Homo sapiens
VRGTTCRNNSRGKTCRH

DYGAMCYSNNYGAACYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX
0.987 0.957
NR1I2
M09283_2.00
Homo sapiens
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C
0.987 0.957
NR1I2
M05626_2.00
Homo sapiens
VRGKKCRNNVRGKKCRN

NYGMMCYBNNYGMMCYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX
0.987 0.957
Nr1i2
M09316_2.00
Mus musculus
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C
0.965 0.929
ENSPMAG00000000180
M02403_2.00
Petromyzon marinus
RGKWCRN

NYGWMCY
PBM
Weirauch et al.(2014)
pTH5509
0.953 0.671
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.935 0.657
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.935 0.657
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.935 0.657
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.935 0.657
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.935 0.657
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.935 0.657
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.935 0.657
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.935 0.657
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.935 0.657
ENSGALG00000028624
M02398_2.00
Gallus gallus
GRGKTCAH

DTGAMCYC
PBM
Weirauch et al.(2014)
pTH6492
0.899 0.643
NR1I3
M03924_2.00
Homo sapiens
RGKDYRNNNNRGKKYR

YRMMCYNNNNYRHMCY
SELEX
Nitta et al.(2015)
NR1I3_1
0.776 0.600
NR1I3
M05619_2.00
Homo sapiens
WDAGTTCAH

DTGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_HT-SELEX
0.776 0.600
NR1I3
M09281_2.00
Homo sapiens
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_HUMAN.H11MO.0.C
0.776 0.600
NR1I3
M05620_2.00
Homo sapiens
WDAGTTCRN

NYGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_Methyl-HT-SELEX
0.776 0.600
Nr1i3
M09302_2.00
Mus musculus
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_MOUSE.H11MO.0.C
0.749 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000002614 Nuclear receptor 37 107

Links

Other Nuclear receptor family TFs
Other Myotis lucifugus TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009572 Calypte anna Aan_R009572 I 0.936
ACOC_0001278301 Angiostrongylus costaricensis ACOC_0001278301 I 0.788
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.938
Alligator_sinensis_CCG005392.1 Alligator sinensis Alligator_sinensis_CCG005392.1 I 0.874
Alligator_sinensis_CCG006068.1 Alligator sinensis Alligator_sinensis_CCG006068.1 I 0.918
ANCCAN_11234 Ancylostoma caninum ANCCAN_11234 I 0.785
ASU_11275 Ascaris suum ASU_11275 I 0.768
Bm2982 Brugia malayi Bm2982 I 0.770
BTMF_0001180601 Brugia timori BTMF_0001180601 I 0.770
Cmyd_10001928 Chelonia mydas Cmyd_10001928 I 0.915
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I 0.954
D917_00700 Trichinella nativa D917_00700 I 0.843
D918_02615 Trichuris suis D918_02615 I 0.843
DICVIV_05958 Dictyocaulus viviparus DICVIV_05958 I 0.762
DME_0000391501 Dracunculus medinensis DME_0000391501 I 0.770
EEL_0000192101 Elaeophora elaphi EEL_0000192101 I 0.770
EFV58098 Trichinella spiralis EFV58098 I 0.843
ENSACAG00000001535 Anolis carolinensis ENSACAG00000001535 I 0.901
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.985
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.935
ENSAMEG00000015383 Ailuropoda melanoleuca ENSAMEG00000015383 I 0.862
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I 0.962
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I 0.953
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I 0.953
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.935
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.935
ENSCSAG00000002676 Chlorocebus sabaeus ENSCSAG00000002676 I 0.769
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.935
ENSCSAG00000007092 Chlorocebus sabaeus ENSCSAG00000007092 I 0.812
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I 0.959
ENSCSAVG00000008466 Ciona savignyi ENSCSAVG00000008466 I 0.845
ENSDORG00000001701 Dipodomys ordii ENSDORG00000001701 I 0.753
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.936
ENSGALG00000028624 Gallus gallus ENSGALG00000028624 D 0.899
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I 0.953
ENSGMOG00000016130 Gadus morhua ENSGMOG00000016130 I 0.746
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I 0.953
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.967
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I 0.951
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I 0.953
ENSMEUG00000000113 Macropus eugenii ENSMEUG00000000113 I 0.957
ENSMEUG00000001987 Macropus eugenii ENSMEUG00000001987 I 0.836
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.935
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.935
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.935
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.935
ENSMPUG00000014388 Mustela putorius furo ENSMPUG00000014388 I 0.790
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.987
ENSNLEG00000014287 Nomascus leucogenys ENSNLEG00000014287 I 0.776
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.935
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.935
ENSOARG00000019817 Ovis aries ENSOARG00000019817 I 0.781
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I 0.953
ENSONIG00000014385 Oreochromis niloticus ENSONIG00000014385 I 0.780
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I 0.953
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.935
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.987
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.984
ENSP00000356959 Macaca fascicularis ENSP00000356959 I 0.769
ENSP00000356959-D1 Bos grunniens ENSP00000356959-D1 I 0.790
ENSPANG00000004760 Papio anubis ENSPANG00000004760 I 0.812
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.935
ENSPANG00000014194 Papio anubis ENSPANG00000014194 I 0.769
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I 0.953
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I 0.871
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I 0.953
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D 0.953
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I 0.923
ENSPMAG00000008742 Petromyzon marinus ENSPMAG00000008742 I 0.771
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.935
ENSPPYG00000013508 Pongo abelii ENSPPYG00000013508 I 0.812
ENSPPYG00000014063 Pongo abelii ENSPPYG00000014063 I 0.756
ENSPSIG00000004437 Pelodiscus sinensis ENSPSIG00000004437 I 0.919
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I 0.954
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I 0.964
ENSSHAG00000016687 Sarcophilus harrisii ENSSHAG00000016687 I 0.833
ENSSTOG00000003818 Ictidomys tridecemlineatus ENSSTOG00000003818 I 0.879
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.965
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.935
ENSTSYG00000003990 Tarsius syrichta ENSTSYG00000003990 I 0.873
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.987
ENSXMAG00000003990 Xiphophorus maculatus ENSXMAG00000003990 I 0.848
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I 0.953
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I 0.953
estExt_fgenesh2_pg.C_120005 Branchiostoma floridae estExt_fgenesh2_pg.C_120005 I 0.751
estExt_gwp.C_2760053 Branchiostoma floridae estExt_gwp.C_2760053 I 0.751
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.936
GG10830 Drosophila erecta FBgn0103135 I 0.750
GH20948 Drosophila grimshawi FBgn0128410 I 0.753
GI21285 Drosophila mojavensis FBgn0144015 I 0.753
GJ20887 Drosophila virilis FBgn0208023 I 0.753
GPUH_0000103801 Gongylonema pulchrum GPUH_0000103801 I 0.770
HCOI00433800 Haemonchus contortus HCOI00433800 I 0.787
HCOI00910600 Haemonchus contortus HCOI00910600 I 0.787
L596_g17693 Steinernema carpocapsae L596_g17693 I 0.755
L889_g17804 Steinernema feltiae L889_g17804 I 0.755
L892_g24092 Steinernema scapterisci L892_g24092 I 0.755
L893_g6815 Steinernema glaseri L893_g6815 I 0.755
L898_g14201 Steinernema monticolum L898_g14201 I 0.755
LOAG_16842 Loa loa LOAG_16842 I 0.770
LotgiG138244 Lottia gigantea LotgiG138244 I 0.748
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.988
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.935
nAv.1.0.1.g02667 Acanthocheilonema viteae nAv.1.0.1.g02667 I 0.770
NBR_0001980401 Nippostrongylus brasiliensis NBR_0001980401 I 0.788
NECAME_11142 Necator americanus NECAME_11142 I 0.785
nLs.2.1.2.g05295 Litomosoides sigmodontis nLs.2.1.2.g05295 I 0.770
nOo.2.0.1.g07306 Onchocerca ochengi nOo.2.0.1.g07306 I 0.770
NR1I2 Bos taurus ENSBTAG00000019557 I 0.983
NR1I2 Canis familiaris ENSCAFG00000011094 I 0.952
nr1i2 Takifugu rubripes ENSTRUG00000003245 I 0.890
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.987
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.965
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.965
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.987
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.984
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.930
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.979
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.987
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.987
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.973
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.965
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.965
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.987
NR1I2 Homo sapiens ENSG00000144852 D 0.987
NR1I2 Equus caballus ENSECAG00000008728 I 0.987
nr1i2 Oryzias latipes ENSORLG00000017953 I 0.850
NR1I2 Procavia capensis ENSPCAG00000009674 I 0.963
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.979
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.951
nr1i2 Danio rerio ENSDARG00000029766 I 0.975
NR1I2 Felis catus ENSFCAG00000006092 I 0.985
NR1I2 Loxodonta africana ENSLAFG00000007829 I 0.957
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.964
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.964
Nr1i3 Mus musculus ENSMUSG00000005677 D 0.749
NR1I3 Gorilla gorilla ENSGGOG00000005724 I 0.773
NR1I3 Equus caballus ENSECAG00000020930 I 0.791
NR1I3 Macaca mulatta ENSMMUG00000018128 I 0.769
NR1I3 Homo sapiens ENSG00000143257 D 0.776
NR1I3 Canis familiaris ENSCAFG00000012921 I 0.803
NR1I3 Cavia porcellus ENSCPOG00000015331 I 0.850
NR1I3 Callithrix jacchus ENSCJAG00000004783 I 0.776
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.852
NR1I3 Loxodonta africana ENSLAFG00000001180 I 0.807
NR1I3 Oryctolagus cuniculus ENSOCUG00000013537 I 0.801
NR1I3 Bos taurus ENSBTAG00000009215 I 0.790
Nr1i3 Rattus norvegicus ENSRNOG00000003260 I 0.749
NR1I3 Sus scrofa ENSSSCG00000006353 I 0.790
NR1I3 Sorex araneus ENSSARG00000002684 I 0.869
NR1I3 Dasypus novemcinctus ENSDNOG00000045179 I 0.831
NR1I3 Pteropus vampyrus ENSPVAG00000005540 I 0.790
NR1I3 Erinaceus europaeus ENSEEUG00000004981 I 0.777
NR1I3 Procavia capensis ENSPCAG00000013933 I 0.807
NR1I3 Ochotona princeps ENSOPRG00000003455 I 0.791
NR1I3 Otolemur garnettii ENSOGAG00000013738 I 0.758
NR1I3 Monodelphis domestica ENSMODG00000005089 I 0.793
NR1I3 Felis catus ENSFCAG00000000497 I 0.779
NR1I3 Pan troglodytes ENSPTRG00000001582 I 0.776
nRc.2.0.1.g36086 Romanomermis culicivorax nRc.2.0.1.g36086 I 0.757
OFLC_0000511401 Onchocerca flexuosa OFLC_0000511401 I 0.770
Ogr03312 Ophisaurus gracilis Ogr03312 I 0.897
Pvit_07440 Pogona vitticeps Pvit_07440 I 0.953
Pvit_09404 Pogona vitticeps Pvit_09404 I 0.891
Pvit_09406 Pogona vitticeps Pvit_09406 I 0.891
Q9DFH3_CHICK Gallus gallus Q9DFH3_CHICK I 0.899
SMU15000518 Schmidtea mediterranea SMU15000518 I 0.798
SNAPOd2T00001873001 Oikopleura dioica SNAPOd2T00001873001 I 0.848
TCLT_0000569201 Thelazia callipaeda TCLT_0000569201 I 0.768
TCNE_0001577801 Toxocara canis TCNE_0001577801 I 0.768
TELCIR_16351 Teladorsagia circumcincta TELCIR_16351 I 0.788
tetur01g10970 Tetranychus urticae tetur01g10970 I 0.799
THRA Echinops telfairi ENSETEG00000013166 I 0.764
thraa Danio rerio ENSDARG00000000151 I 0.764
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.843
VDR Homo sapiens ENSG00000111424 D 0.935
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.935
VDR Anolis carolinensis ENSACAG00000013485 I 0.953
VDR Felis catus ENSFCAG00000024594 I 0.935
VDR Tursiops truncatus ENSTTRG00000012578 I 0.935
VDR Otolemur garnettii ENSOGAG00000005480 I 0.935
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.935
VDR Sus scrofa ENSSSCG00000020864 I 0.935
VDR Equus caballus ENSECAG00000015822 I 0.935
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.936
VDR Tupaia belangeri ENSTBEG00000005717 I 0.935
Vdr Mus musculus ENSMUSG00000022479 D 0.935
vdr Oryzias latipes ENSORLG00000016402 I 0.953
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.935
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.935
VDR Bos taurus ENSBTAG00000016414 I 0.935
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.935
VDR Gorilla gorilla ENSGGOG00000016473 I 0.935
VDR Loxodonta africana ENSLAFG00000006418 I 0.935
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.936
VDR Microcebus murinus ENSMICG00000009017 I 0.935
vdr Xenopus tropicalis XB-GENE-486505 I 0.941
VDR Myotis lucifugus ENSMLUG00000000912 I 0.935
VDR Canis familiaris ENSCAFG00000009103 I 0.935
VDR Callithrix jacchus ENSCJAG00000015018 I 0.935
VDR Macaca mulatta ENSMMUG00000006727 I 0.935
vdr-a Ciona intestinalis ENSCING00000020740 I 0.953
vdr.S Xenopus laevis XB-GENE-864847 I 0.943
vdra Tetraodon nigroviridis ENSTNIG00000005559 I 0.922
vdra Takifugu rubripes ENSTRUG00000011907 I 0.953
vdra Gasterosteus aculeatus ENSGACG00000004763 I 0.953
vdralpha Oryzias latipes ENSORLG00000001063 I 0.953
vdrb Gasterosteus aculeatus ENSGACG00000007975 I 0.953
vdrb Takifugu rubripes ENSTRUG00000011576 I 0.953
vdrb Danio rerio ENSDARG00000070721 I 0.953
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I 0.953
WBGene00245913 Onchocerca volvulus WBGene00245913 I 0.770
WUBG_00356 Wuchereria bancrofti WUBG_00356 I 0.770