ENSONIG00000014385 (Oreochromis niloticus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSONIG00000014385 T304200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Nr1i2
M09316_2.00
Mus musculus
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C
0.905 0.657
NR1I2
M03925_2.00
Homo sapiens
RGKKCRNNVRGKKCR

YGMMCYBNNYGMMCY
SELEX
Nitta et al.(2015)
NR1I2_1
0.780 0.643
NR1I2
M05625_2.00
Homo sapiens
VRGTTCRNNSRGKTCRH

DYGAMCYSNNYGAACYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX
0.780 0.643
NR1I2
M09283_2.00
Homo sapiens
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C
0.780 0.643
NR1I2
M05626_2.00
Homo sapiens
VRGKKCRNNVRGKKCRN

NYGMMCYBNNYGMMCYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX
0.780 0.643
ENSPMAG00000000180
M02403_2.00
Petromyzon marinus
RGKWCRN

NYGWMCY
PBM
Weirauch et al.(2014)
pTH5509
0.766 0.686
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.754 0.643
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.754 0.643
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.754 0.643
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.754 0.643
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.754 0.643
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.754 0.643
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.754 0.643
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.754 0.643
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.754 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000018088 Nuclear receptor 34 103
ENSONIP00000018089 Nuclear receptor 34 103

Links

Other Nuclear receptor family TFs
Other Oreochromis niloticus TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009572 Calypte anna Aan_R009572 I 0.761
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.764
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I 0.775
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I 0.763
CJA16298 Caenorhabditis japonica CJA16298 N 0.746
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I 0.764
VDR Anolis carolinensis ENSACAG00000013485 I 0.761
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.794
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.754
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I 0.762
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I 0.762
VDR Bos taurus ENSBTAG00000016414 I 0.754
VDR Canis familiaris ENSCAFG00000009103 I 0.754
NR1I2 Canis familiaris ENSCAFG00000011094 I 0.841
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.754
vdr-a Ciona intestinalis ENSCING00000020740 I 0.763
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.780
VDR Callithrix jacchus ENSCJAG00000015018 I 0.754
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.754
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.905
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.754
vdrb Danio rerio ENSDARG00000070721 I 0.762
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.754
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.905
NR1I2 Equus caballus ENSECAG00000008728 I 0.780
VDR Equus caballus ENSECAG00000015822 I 0.754
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.754
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.780
NR1I2 Felis catus ENSFCAG00000006092 I 0.794
VDR Felis catus ENSFCAG00000024594 I 0.754
VDR Homo sapiens ENSG00000111424 D 0.754
NR1I2 Homo sapiens ENSG00000144852 D 0.780
vdra Gasterosteus aculeatus ENSGACG00000004763 I 0.758
vdrb Gasterosteus aculeatus ENSGACG00000007975 I 0.758
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.761
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.780
VDR Gorilla gorilla ENSGGOG00000016473 I 0.754
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I 0.761
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I 0.762
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I 0.755
VDR Loxodonta africana ENSLAFG00000006418 I 0.754
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I 0.758
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.754
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.761
VDR Microcebus murinus ENSMICG00000009017 I 0.754
VDR Myotis lucifugus ENSMLUG00000000912 I 0.754
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.780
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.780
VDR Macaca mulatta ENSMMUG00000006727 I 0.754
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.754
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.754
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.754
Vdr Mus musculus ENSMUSG00000022479 D 0.754
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.905
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.780
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.754
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.754
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.950
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.754
VDR Otolemur garnettii ENSOGAG00000005480 I 0.754
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.872
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I 0.762
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I 0.758
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.908
vdralpha Oryzias latipes ENSORLG00000001063 I 0.762
vdr Oryzias latipes ENSORLG00000016402 I 0.762
nr1i2 Oryzias latipes ENSORLG00000017953 I 0.887
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.754
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.780
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.754
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I 0.762
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I 0.918
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I 0.762
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D 0.766
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.754
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I 0.764
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.780
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.754
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.905
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.754
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I 0.773
VDR Sus scrofa ENSSSCG00000020864 I 0.754
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.905
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.754
VDR Tupaia belangeri ENSTBEG00000005717 I 0.754
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.761
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I 0.762
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.796
vdrb Takifugu rubripes ENSTRUG00000011576 I 0.762
vdra Takifugu rubripes ENSTRUG00000011907 I 0.762
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.780
VDR Tursiops truncatus ENSTTRG00000012578 I 0.754
ENSXMAG00000003990 Xiphophorus maculatus ENSXMAG00000003990 I 0.903
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I 0.762
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I 0.762
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.763
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.780
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.754
Pvit_07440 Pogona vitticeps Pvit_07440 I 0.761
Pvit_09404 Pogona vitticeps Pvit_09404 I 0.757
Pvit_09406 Pogona vitticeps Pvit_09406 I 0.757
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.746
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.819
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.766