PGR (Ochotona princeps)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSOPRG00000008534 T304239_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PGR
M03923_2.00
Homo sapiens
DGNACANNNYGTNCY

RGNACRNNNTGTNCH
SELEX
Nitta et al.(2015)
PGR_1
0.993 0.986
PGR
M09266_2.00
Homo sapiens
RGNACWBYBTGTNCYN

NRGNACAVRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A
0.993 0.986
Pgr
M09326_2.00
Mus musculus
RGNACWBYNTGTNCY

RGNACANRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A
0.993 0.986
PGR
M09603_2.00
Homo sapiens
RNACWNNNWGTNCHN

NDGNACWNNNWGTNY
Misc
Heinz et al.(2010)
T47D-PR_GSE31130
0.993 0.986
PGR
M11095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_01
0.993 0.986
PGR
M11096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_02
0.993 0.986
PGR
M11097_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_Q6
0.993 0.986
NR3C2
M02395_2.00
Homo sapiens
NNRGDACAN

NTGTHCYNN
PBM
Weirauch et al.(2014)
pTH5924
0.990 0.886
NR3C2
M03382_2.00
Homo sapiens
NRGDACAHDRTGTHCYN

NRGDACAYHDTGTHCYN
SELEX
Jolma et al.(2013)
NR3C2_1
0.990 0.886
NR3C2
M05637_2.00
Homo sapiens
NGNACRNNNYGTNCN

NGNACRNNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX
0.990 0.886
NR3C2
M05638_2.00
Homo sapiens
NGNACRNNVYGTNCN

NGNACRBNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX
0.990 0.886
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY

RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.989 0.871
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY

RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.989 0.871
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC

GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.989 0.871
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH

DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.984 0.829
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY

RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.984 0.829
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC

GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.984 0.829
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN

NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.984 0.829
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY

RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.984 0.829
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY

RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.984 0.829
NR3C1
M11119_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.984 0.829
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK

MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.984 0.829
NR3C1
M11121_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.984 0.829
NR3C1
M11122_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.984 0.829
NR3C1
M11123_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.984 0.829
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN

NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.984 0.829
NR3C1
M11125_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.984 0.829
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY

RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.984 0.829
Ar
M00821_2.00
Mus musculus
NRRGAACAYN

NRTGTTCYYN
PBM
Weirauch et al.(2013)
pTH1739
0.977 0.786
AR
M03389_2.00
Homo sapiens
DRGWACRHVDYGTWCCY

RGGWACRHBDYGTWCYH
SELEX
Jolma et al.(2013)
AR_1
0.977 0.786
AR
M03390_2.00
Homo sapiens
DRGWACAYNRTGTWCYY

RRGWACAYNRTGTWCYH
SELEX
Jolma et al.(2013)
AR_2
0.977 0.786
Ar
M03436_2.00
Mus musculus
NRGHACAYNVYGTWCYN

NRGWACRBNRTGTDCYN
SELEX
Jolma et al.(2013)
Ar_1
0.977 0.786
AR
M09288_2.00
Homo sapiens
DRYAAAYADNNNRGNACA

TGTNCYNNNHTRTTTRYH
Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A
0.977 0.786
Ar
M09331_2.00
Mus musculus
NRGNACABRVTGTNCY

RGNACABYVTGTNCYN
Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A
0.977 0.786
AR
M09610_2.00
Homo sapiens
NRGNACABNVTGTNCY

RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824
0.977 0.786
AR
M09609_2.00
Homo sapiens
SHDRGVACAS

STGTBCYHDS
Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824
0.977 0.786
AR
M11157_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_01
0.977 0.786
AR
M11158_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_02
0.977 0.786
AR
M11159_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_03
0.977 0.786
AR
M11160_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_04
0.977 0.786
AR
M11161_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_11
0.977 0.786
AR
M11162_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_13
0.977 0.786
AR
M11163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_14_H
0.977 0.786
AR
M11164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q2
0.977 0.786
AR
M11165_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6_01
0.977 0.786
AR
M11166_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6
0.977 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000007821 Nuclear receptor 492 561

Links

Other Nuclear receptor family TFs
Other Ochotona princeps TFs

274 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA035741 Oryza indica BGIOSGA035741 N 0.000
BRADI2G52227 Brachypodium distachyon BRADI2G52227 N 0.000
BRADI4G09197 Brachypodium distachyon BRADI4G09197 N 0.000
F775_17625 Aegilops tauschii F775_17625 N 0.000
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.000
GRMZM2G163427 Zea mays GRMZM2G163427 N 0.000
GRMZM5G868355 Zea mays GRMZM5G868355 N 0.000
LPERR11G20420 Leersia perrieri LPERR11G20420 N 0.000
MLOC_74705 Hordeum vulgare MLOC_74705 N 0.000
OB11G28090 Oryza brachyantha OB11G28090 N 0.000
OBART11G23660 Oryza barthii OBART11G23660 N 0.000
OBART11G23670 Oryza barthii OBART11G23670 N 0.000
ONIVA11G23190 Oryza nivara ONIVA11G23190 N 0.000
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.000
ORGLA11G0190200 Oryza glaberrima ORGLA11G0190200 N 0.000
ORGLA11G0190300 Oryza glaberrima ORGLA11G0190300 N 0.000
ORUFI11G25540 Oryza rufipogon ORUFI11G25540 N 0.000
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N 0.000
Pavir.Ha00317 Panicum virgatum Pavir.Ha00317 N 0.000
Pavir.Hb00044 Panicum virgatum Pavir.Hb00044 N 0.000
Sb05g027740 Sorghum bicolor Sb05g027740 N 0.000
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.000
Si025985m.g Setaria italica Si025985m.g N 0.000
Traes_4AL_FF199F127 Triticum aestivum Traes_4AL_FF199F127 N 0.000
Traes_4BS_A79538646 Triticum aestivum Traes_4BS_A79538646 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_4DS_F8FC0C699 Triticum aestivum Traes_4DS_F8FC0C699 N 0.000
TRIUR3_21532 Triticum urartu TRIUR3_21532 N 0.000