nr1i2 (Oryzias latipes)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSORLG00000017953 T304330_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr1i2
M09316_2.00 		Mus musculus
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C 		0.843 0.614
NR1I2
M03925_2.00 		Homo sapiens
RGKKCRNNVRGKKCR
YGMMCYBNNYGMMCY		 SELEX
Nitta et al.(2015)
NR1I2_1 		0.837 0.614
NR1I2
M05625_2.00 		Homo sapiens
VRGTTCRNNSRGKTCRH
DYGAMCYSNNYGAACYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX 		0.837 0.614
NR1I2
M09283_2.00 		Homo sapiens
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C 		0.837 0.614
NR1I2
M05626_2.00 		Homo sapiens
VRGKKCRNNVRGKKCRN
NYGMMCYBNNYGMMCYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX 		0.837 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000022472 Nuclear receptor 20 89

Links

Other Nuclear receptor family TFs
Other Oryzias latipes TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I 0.979
ENSXMAG00000003990 Xiphophorus maculatus ENSXMAG00000003990 I 0.975
nr1i2 Takifugu rubripes ENSTRUG00000003245 I 0.912
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.904
ENSONIG00000014385 Oreochromis niloticus ENSONIG00000014385 I 0.887
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.870
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.850
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.850
nr1i2 Danio rerio ENSDARG00000029766 I 0.845
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.843
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.843
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.843
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.843
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.843
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.837
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.837
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.837
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.837
NR1I2 Equus caballus ENSECAG00000008728 I 0.837
NR1I2 Homo sapiens ENSG00000144852 D 0.837
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.837
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.837
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.837
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.837
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.837
NR1I2 Felis catus ENSFCAG00000006092 I 0.837
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.836
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.827
NR1I2 Bos taurus ENSBTAG00000019557 I 0.815
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.809
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.809
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.786
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I 0.785
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.783
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.782
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.753