ENSTNIG00000017732 (Tetraodon nigroviridis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSTNIG00000017732 T305023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY

RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.854 0.960
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY

RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.854 0.960
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC

GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.854 0.960
NR3C2
M02395_2.00
Homo sapiens
NNRGDACAN

NTGTHCYNN
PBM
Weirauch et al.(2014)
pTH5924
0.842 0.940
NR3C2
M03382_2.00
Homo sapiens
NRGDACAHDRTGTHCYN

NRGDACAYHDTGTHCYN
SELEX
Jolma et al.(2013)
NR3C2_1
0.842 0.940
NR3C2
M05637_2.00
Homo sapiens
NGNACRNNNYGTNCN

NGNACRNNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX
0.842 0.940
NR3C2
M05638_2.00
Homo sapiens
NGNACRNNVYGTNCN

NGNACRBNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX
0.842 0.940
PGR
M03923_2.00
Homo sapiens
DGNACANNNYGTNCY

RGNACRNNNTGTNCH
SELEX
Nitta et al.(2015)
PGR_1
0.817 0.900
PGR
M09266_2.00
Homo sapiens
RGNACWBYBTGTNCYN

NRGNACAVRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A
0.817 0.900
Pgr
M09326_2.00
Mus musculus
RGNACWBYNTGTNCY

RGNACANRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A
0.817 0.900
PGR
M09603_2.00
Homo sapiens
RNACWNNNWGTNCHN

NDGNACWNNNWGTNY
Misc
Heinz et al.(2010)
T47D-PR_GSE31130
0.817 0.900
PGR
M11095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_01
0.817 0.900
PGR
M11096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_02
0.817 0.900
PGR
M11097_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_Q6
0.817 0.900
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH

DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.792 0.900
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY

RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.792 0.900
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC

GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.792 0.900
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN

NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.792 0.900
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY

RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.792 0.900
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY

RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.792 0.900
NR3C1
M11119_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.792 0.900
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK

MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.792 0.900
NR3C1
M11121_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.792 0.900
NR3C1
M11122_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.792 0.900
NR3C1
M11123_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.792 0.900
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN

NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.792 0.900
NR3C1
M11125_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.792 0.900
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY

RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.792 0.900
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020882 Nuclear receptor 1 50

Links

Other Nuclear receptor family TFs
Other Tetraodon nigroviridis TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAA75575 Xenopus laevis AAA75575 I 0.755
Aan_R001703 Calypte anna Aan_R001703 I 0.817
Aan_R003091 Calypte anna Aan_R003091 I 0.842
Aan_R011045 Calypte anna Aan_R011045 I 0.854
Afo_R005356 Aptenodytes forsteri Afo_R005356 I 0.817
Afo_R005784 Aptenodytes forsteri Afo_R005784 I 0.842
Afo_R012175 Aptenodytes forsteri Afo_R012175 I 0.854
Alligator_sinensis_CCG004021.1 Alligator sinensis Alligator_sinensis_CCG004021.1 I 0.854
Brh_R000580 Buceros rhinoceros Brh_R000580 I 0.842
Brh_R012002 Buceros rhinoceros Brh_R012002 I 0.854
Cmyd_10006041 Chelonia mydas Cmyd_10006041 I 0.854
ENSACAG00000013594 Anolis carolinensis ENSACAG00000013594 I 0.817
ENSAMEG00000002068 Ailuropoda melanoleuca ENSAMEG00000002068 I 0.755
ENSAMEG00000010159 Ailuropoda melanoleuca ENSAMEG00000010159 I 0.854
ENSAMEG00000017449 Ailuropoda melanoleuca ENSAMEG00000017449 I 0.817
ENSAMXG00000005747 Astyanax mexicanus ENSAMXG00000005747 I 0.805
ENSAMXG00000011646 Astyanax mexicanus ENSAMXG00000011646 I 0.854
ENSAMXG00000020042 Astyanax mexicanus ENSAMXG00000020042 I 0.854
ENSAPLG00000003887 Anas platyrhynchos ENSAPLG00000003887 I 0.817
ENSAPLG00000007318 Anas platyrhynchos ENSAPLG00000007318 I 0.854
ENSAPLG00000015146 Anas platyrhynchos ENSAPLG00000015146 I 0.842
ENSCPOG00000020113 Cavia porcellus ENSCPOG00000020113 I 0.817
ENSCSAG00000003260 Chlorocebus sabaeus ENSCSAG00000003260 I 0.817
ENSCSAG00000012355 Chlorocebus sabaeus ENSCSAG00000012355 I 0.854
ENSDORG00000010001 Dipodomys ordii ENSDORG00000010001 I 0.792
ENSFALG00000000354 Ficedula albicollis ENSFALG00000000354 I 0.817
ENSFALG00000005415 Ficedula albicollis ENSFALG00000005415 I 0.842
ENSFALG00000008958 Ficedula albicollis ENSFALG00000008958 I 0.854
ENSFCAG00000027453 Felis catus ENSFCAG00000027453 I 0.842
ENSGALG00000007394 Gallus gallus ENSGALG00000007394 I 0.854
ENSGMOG00000001897 Gadus morhua ENSGMOG00000001897 I 0.870
ENSGMOG00000002886 Gadus morhua ENSGMOG00000002886 I 0.822
ENSGMOG00000005668 Gadus morhua ENSGMOG00000005668 I 0.854
ENSGMOG00000017783 Gadus morhua ENSGMOG00000017783 I 0.854
ENSLACG00000013150 Latimeria chalumnae ENSLACG00000013150 I 0.817
ENSLACG00000015535 Latimeria chalumnae ENSLACG00000015535 I 0.854
ENSLOCG00000005538 Lepisosteus oculatus ENSLOCG00000005538 I 0.826
ENSLOCG00000008694 Lepisosteus oculatus ENSLOCG00000008694 I 0.870
ENSLOCG00000010508 Lepisosteus oculatus ENSLOCG00000010508 I 0.854
ENSMEUG00000009869 Macropus eugenii ENSMEUG00000009869 I 0.792
ENSMEUG00000015727 Macropus eugenii ENSMEUG00000015727 I 0.817
ENSMLUG00000022851 Myotis lucifugus ENSMLUG00000022851 I 0.817
ENSMMUP00000015545 Macaca fascicularis ENSMMUP00000015545 I 0.817
ENSMMUP00000019623 Macaca fascicularis ENSMMUP00000019623 I 0.842
ENSMPUG00000001784 Mustela putorius furo ENSMPUG00000001784 I 0.817
ENSMPUG00000007025 Mustela putorius furo ENSMPUG00000007025 I 0.842
ENSMPUG00000007881 Mustela putorius furo ENSMPUG00000007881 I 0.854
ENSNLEG00000005677 Nomascus leucogenys ENSNLEG00000005677 I 0.755
ENSNLEG00000007154 Nomascus leucogenys ENSNLEG00000007154 I 0.817
ENSNLEG00000009765 Nomascus leucogenys ENSNLEG00000009765 I 0.854
ENSOARG00000002045 Ovis aries ENSOARG00000002045 I 0.854
ENSONIG00000008483 Oreochromis niloticus ENSONIG00000008483 I 0.854
ENSONIG00000010029 Oreochromis niloticus ENSONIG00000010029 I 0.870
ENSONIG00000017907 Oreochromis niloticus ENSONIG00000017907 I 0.854
ENSP00000231509 Macaca fascicularis ENSP00000231509 I 0.792
ENSP00000231509-D1 Bos grunniens ENSP00000231509-D1 I 0.792
ENSPANG00000003021 Papio anubis ENSPANG00000003021 I 0.854
ENSPANG00000010677 Papio anubis ENSPANG00000010677 I 0.817
ENSPFOG00000002202 Poecilia formosa ENSPFOG00000002202 I 0.808
ENSPFOG00000005866 Poecilia formosa ENSPFOG00000005866 I 0.854
ENSPFOG00000009620 Poecilia formosa ENSPFOG00000009620 I 0.870
ENSPFOG00000010312 Poecilia formosa ENSPFOG00000010312 I 0.854
ENSPMAG00000005858 Petromyzon marinus ENSPMAG00000005858 I 0.835
ENSPPYG00000003801 Pongo abelii ENSPPYG00000003801 I 0.817
ENSPPYG00000015113 Pongo abelii ENSPPYG00000015113 I 0.789
ENSPPYG00000015900 Pongo abelii ENSPPYG00000015900 I 0.854
ENSPSIG00000006383 Pelodiscus sinensis ENSPSIG00000006383 I 0.842
ENSPSIG00000013654 Pelodiscus sinensis ENSPSIG00000013654 I 0.817
ENSPSIG00000015245 Pelodiscus sinensis ENSPSIG00000015245 I 0.854
ENSSARG00000000617 Sorex araneus ENSSARG00000000617 I 0.792
ENSSHAG00000001727 Sarcophilus harrisii ENSSHAG00000001727 I 0.792
ENSSHAG00000016670 Sarcophilus harrisii ENSSHAG00000016670 I 0.817
ENSSTOG00000004069 Ictidomys tridecemlineatus ENSSTOG00000004069 I 0.755
ENSSTOG00000016527 Ictidomys tridecemlineatus ENSSTOG00000016527 I 0.854
ENSTGUG00000012778 Taeniopygia guttata ENSTGUG00000012778 I 0.817
ENSTSYG00000005335 Tarsius syrichta ENSTSYG00000005335 I 0.755
ENSTSYG00000013696 Tarsius syrichta ENSTSYG00000013696 I 0.792
ENSVPAG00000008979 Vicugna pacos ENSVPAG00000008979 I 0.817
ENSXMAG00000001522 Xiphophorus maculatus ENSXMAG00000001522 I 0.854
ENSXMAG00000007553 Xiphophorus maculatus ENSXMAG00000007553 I 0.808
ENSXMAG00000009167 Xiphophorus maculatus ENSXMAG00000009167 I 0.854
ENSXMAG00000013809 Xiphophorus maculatus ENSXMAG00000013809 I 0.870
Gfo_R000856 Geospiza fortis Gfo_R000856 I 0.842
Gfo_R003636 Geospiza fortis Gfo_R003636 I 0.817
Gfo_R013369 Geospiza fortis Gfo_R013369 I 0.854
Myotis_brandtii_NR3C1_10027902 Myotis brandtii Myotis_brandtii_NR3C1_10027902 I 0.854
Myotis_brandtii_NR3C2_10027722 Myotis brandtii Myotis_brandtii_NR3C2_10027722 I 0.842
NR3C1 Pan troglodytes ENSPTRG00000017363 I 0.792
nr3c1 Takifugu rubripes ENSTRUG00000007443 I 0.854
NR3C1 Takifugu rubripes ENSTRUG00000006399 I 0.854
NR3C1 Ochotona princeps ENSOPRG00000015535 I 0.792
NR3C1 Oryzias latipes ENSORLG00000001565 I 0.854
nr3c1 Oryzias latipes ENSORLG00000006022 I 0.854
NR3C1 Tetraodon nigroviridis ENSTNIG00000018209 I 0.854
NR3C1 Taeniopygia guttata ENSTGUG00000000140 I 0.854
nr3c1 Tetraodon nigroviridis ENSTNIG00000008946 I 0.854
NR3C1 Tupaia belangeri ENSTBEG00000016278 I 0.792
NR3C1 Sus scrofa ENSSSCG00000014401 I 0.854
nr3c1 Xenopus tropicalis XB-GENE-484757 I 0.854
Nr3c1 Rattus norvegicus ENSRNOG00000014096 I 0.854
NR3C1 Pteropus vampyrus ENSPVAG00000014255 I 0.792
NR3C1 Tursiops truncatus ENSTTRG00000003260 I 0.792
NR3C1 Anolis carolinensis ENSACAG00000013668 I 0.854
Nr3c1 Mus musculus ENSMUSG00000024431 D 0.854
NR3C1 Monodelphis domestica ENSMODG00000010319 I 0.854
NR3C1 Echinops telfairi ENSETEG00000014280 I 0.792
nr3c1 Gasterosteus aculeatus ENSGACG00000018209 I 0.854
NR3C1 Gasterosteus aculeatus ENSGACG00000020725 I 0.854
NR3C1 Gorilla gorilla ENSGGOG00000004334 I 0.792
NR3C1 Macaca mulatta ENSMMUG00000000421 I 0.854
NR3C1 Myotis lucifugus ENSMLUG00000011289 I 0.854
NR3C1 Loxodonta africana ENSLAFG00000005015 I 0.854
NR3C1 Meleagris gallopavo ENSMGAG00000009322 I 0.854
NR3C1 Equus caballus ENSECAG00000009473 I 0.854
NR3C1 Erinaceus europaeus ENSEEUG00000008977 I 0.792
NR3C1 Bos taurus ENSBTAG00000019472 I 0.854
NR3C1 Otolemur garnettii ENSOGAG00000003356 I 0.854
NR3C1 Canis familiaris ENSCAFG00000006293 I 0.854
NR3C1 Oryctolagus cuniculus ENSOCUG00000011676 I 0.854
NR3C1 Callithrix jacchus ENSCJAG00000018337 I 0.854
NR3C1 Cavia porcellus ENSCPOG00000005188 I 0.854
NR3C1 Homo sapiens ENSG00000113580 D 0.854
NR3C1 Ornithorhynchus anatinus ENSOANG00000005745 I 0.792
nr3c1 Danio rerio ENSDARG00000025032 I 0.854
NR3C1 Dasypus novemcinctus ENSDNOG00000010685 I 0.854
NR3C1 Microcebus murinus ENSMICG00000009473 I 0.792
nr3c1.L Xenopus laevis XB-GENE-865499 I 0.854
NR3C2 Ornithorhynchus anatinus ENSOANG00000005268 I 0.842
NR3C2 Canis familiaris ENSCAFG00000007813 I 0.842
NR3C2 Choloepus hoffmanni ENSCHOG00000003783 I 0.755
NR3C2 Homo sapiens ENSG00000151623 D 0.842
NR3C2 Anolis carolinensis ENSACAG00000003612 I 0.842
nr3c2 Takifugu rubripes ENSTRUG00000014871 I 0.870
NR3C2 Callithrix jacchus ENSCJAG00000002360 I 0.842
NR3C2 Monodelphis domestica ENSMODG00000000830 I 0.842
NR3C2 Vicugna pacos ENSVPAG00000006935 I 0.755
nr3c2 Danio rerio ENSDARG00000102082 I 0.870
NR3C2 Oryctolagus cuniculus ENSOCUG00000003137 I 0.842
NR3C2 Erinaceus europaeus ENSEEUG00000005639 I 0.792
NR3C2 Cavia porcellus ENSCPOG00000007770 I 0.842
nr3c2 Oryzias latipes ENSORLG00000007530 I 0.870
Nr3c2 Mus musculus ENSMUSG00000031618 I 0.842
Nr3c2 Dipodomys ordii ENSDORG00000016701 I 0.755
NR3C2 Dasypus novemcinctus ENSDNOG00000049736 I 0.842
nr3c2 Gasterosteus aculeatus ENSGACG00000017193 I 0.870
NR3C2 Macaca mulatta ENSMMUG00000014955 I 0.842
NR3C2 Taeniopygia guttata ENSTGUG00000002577 I 0.842
nr3c2 Xenopus tropicalis XB-GENE-483085 I 0.830
Nr3c2 Rattus norvegicus ENSRNOG00000034007 I 0.842
NR3C2 Loxodonta africana ENSLAFG00000022550 I 0.755
NR3C2 Otolemur garnettii ENSOGAG00000014008 I 0.842
NR3C2 Meleagris gallopavo ENSMGAG00000004038 I 0.842
NR3C2 Bos taurus ENSBTAG00000027182 I 0.842
NR3C2 Pteropus vampyrus ENSPVAG00000010910 I 0.755
NR3C2 Myotis lucifugus ENSMLUG00000008108 I 0.842
NR3C2 Gorilla gorilla ENSGGOG00000001102 I 0.755
NR3C2 Pan troglodytes ENSPTRG00000016499 I 0.842
NR3C2 Tupaia belangeri ENSTBEG00000012720 I 0.755
NR3C2 Gallus gallus ENSGALG00000010035 I 0.842
NR3C2 Equus caballus ENSECAG00000016605 I 0.842
nr3c2.L Xenopus laevis XB-GENE-483089 I 0.830
pgr Danio rerio ENSDARG00000035966 I 0.822
pgr Xenopus tropicalis XB-GENE-484457 I 0.785
Pgr Mus musculus ENSMUSG00000031870 D 0.817
PGR Callithrix jacchus ENSCJAG00000000583 I 0.817
PGR Oryctolagus cuniculus ENSOCUG00000014693 I 0.817
PGR Choloepus hoffmanni ENSCHOG00000007092 I 0.817
PGR Canis familiaris ENSCAFG00000003978 I 0.817
PGR Ochotona princeps ENSOPRG00000008534 I 0.817
PGR Dasypus novemcinctus ENSDNOG00000048850 I 0.817
PGR Pan troglodytes ENSPTRG00000004206 I 0.817
Pgr Rattus norvegicus ENSRNOG00000006831 I 0.817
PGR Microcebus murinus ENSMICG00000006331 I 0.817
PGR Pteropus vampyrus ENSPVAG00000006626 I 0.817
PGR Gorilla gorilla ENSGGOG00000016358 I 0.817
PGR Sus scrofa ENSSSCG00000014977 I 0.817
PGR Gallus gallus ENSGALG00000017195 I 0.817
PGR Macaca mulatta ENSMMUG00000011846 I 0.817
pgr Gasterosteus aculeatus ENSGACG00000012162 I 0.808
PGR Monodelphis domestica ENSMODG00000000509 I 0.817
PGR Equus caballus ENSECAG00000011511 I 0.817
PGR Homo sapiens ENSG00000082175 D 0.817
pgr Tetraodon nigroviridis ENSTNIG00000019045 I 0.808
PGR Echinops telfairi ENSETEG00000009960 I 0.817
PGR Tursiops truncatus ENSTTRG00000000030 I 0.817
PGR Felis catus ENSFCAG00000011489 I 0.817
pgr Takifugu rubripes ENSTRUG00000013128 I 0.808
PGR Otolemur garnettii ENSOGAG00000012310 I 0.817
pgr.L Xenopus laevis XB-GENE-865085 I 0.785
Pvit_02483 Pogona vitticeps Pvit_02483 I 0.842
Pvit_04205 Pogona vitticeps Pvit_04205 I 0.854
Pvit_10729 Pogona vitticeps Pvit_10729 I 0.817
Tal_R004067 Tyto alba Tal_R004067 I 0.854
Tal_R011412 Tyto alba Tal_R011412 I 0.817
Tal_R012917 Tyto alba Tal_R012917 I 0.842