NR3C1 (Tetraodon nigroviridis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSTNIG00000018209 T305027_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY

RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.993 0.957
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY

RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.993 0.957
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC

GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.993 0.957
NR3C2
M02395_2.00
Homo sapiens
NNRGDACAN

NTGTHCYNN
PBM
Weirauch et al.(2014)
pTH5924
0.991 0.957
NR3C2
M03382_2.00
Homo sapiens
NRGDACAHDRTGTHCYN

NRGDACAYHDTGTHCYN
SELEX
Jolma et al.(2013)
NR3C2_1
0.991 0.957
NR3C2
M05637_2.00
Homo sapiens
NGNACRNNNYGTNCN

NGNACRNNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX
0.991 0.957
NR3C2
M05638_2.00
Homo sapiens
NGNACRNNVYGTNCN

NGNACRBNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX
0.991 0.957
PGR
M03923_2.00
Homo sapiens
DGNACANNNYGTNCY

RGNACRNNNTGTNCH
SELEX
Nitta et al.(2015)
PGR_1
0.990 0.886
PGR
M09266_2.00
Homo sapiens
RGNACWBYBTGTNCYN

NRGNACAVRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A
0.990 0.886
Pgr
M09326_2.00
Mus musculus
RGNACWBYNTGTNCY

RGNACANRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A
0.990 0.886
PGR
M09603_2.00
Homo sapiens
RNACWNNNWGTNCHN

NDGNACWNNNWGTNY
Misc
Heinz et al.(2010)
T47D-PR_GSE31130
0.990 0.886
PGR
M11095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_01
0.990 0.886
PGR
M11096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_02
0.990 0.886
PGR
M11097_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_Q6
0.990 0.886
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH

DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.990 0.914
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY

RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.990 0.914
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC

GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.990 0.914
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN

NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.990 0.914
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY

RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.990 0.914
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY

RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.990 0.914
NR3C1
M11119_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.990 0.914
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK

MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.990 0.914
NR3C1
M11121_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.990 0.914
NR3C1
M11122_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.990 0.914
NR3C1
M11123_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.990 0.914
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN

NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.990 0.914
NR3C1
M11125_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.990 0.914
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY

RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.990 0.914
Ar
M00821_2.00
Mus musculus
NRRGAACAYN

NRTGTTCYYN
PBM
Weirauch et al.(2013)
pTH1739
0.974 0.757
AR
M03389_2.00
Homo sapiens
DRGWACRHVDYGTWCCY

RGGWACRHBDYGTWCYH
SELEX
Jolma et al.(2013)
AR_1
0.974 0.757
AR
M03390_2.00
Homo sapiens
DRGWACAYNRTGTWCYY

RRGWACAYNRTGTWCYH
SELEX
Jolma et al.(2013)
AR_2
0.974 0.757
Ar
M03436_2.00
Mus musculus
NRGHACAYNVYGTWCYN

NRGWACRBNRTGTDCYN
SELEX
Jolma et al.(2013)
Ar_1
0.974 0.757
AR
M09288_2.00
Homo sapiens
DRYAAAYADNNNRGNACA

TGTNCYNNNHTRTTTRYH
Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A
0.974 0.757
Ar
M09331_2.00
Mus musculus
NRGNACABRVTGTNCY

RGNACABYVTGTNCYN
Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A
0.974 0.757
AR
M09610_2.00
Homo sapiens
NRGNACABNVTGTNCY

RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824
0.974 0.757
AR
M09609_2.00
Homo sapiens
SHDRGVACAS

STGTBCYHDS
Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824
0.974 0.757
AR
M11157_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_01
0.974 0.757
AR
M11158_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_02
0.974 0.757
AR
M11159_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_03
0.974 0.757
AR
M11160_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_04
0.974 0.757
AR
M11161_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_11
0.974 0.757
AR
M11162_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_13
0.974 0.757
AR
M11163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_14_H
0.974 0.757
AR
M11164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q2
0.974 0.757
AR
M11165_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6_01
0.974 0.757
AR
M11166_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6
0.974 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000021375 Nuclear receptor 390 473

Links

Other Nuclear receptor family TFs
Other Tetraodon nigroviridis TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL012237 Aedes aegypti AAEL012237 I 0.000
AALB008732 Anopheles albimanus AALB008732 I 0.000
AARA001274 Anopheles arabiensis AARA001274 I 0.000
ACEP16358 Atta cephalotes ACEP16358 I 0.000
ACHR003925 Anopheles christyi ACHR003925 I 0.000
ACOM035641 Anopheles coluzzii ACOM035641 I 0.000
ACUA001438 Anopheles culicifacies ACUA001438 I 0.000
ACYPI005523 Acyrthosiphon pisum ACYPI005523 I 0.000
ADIR006501 Anopheles dirus ADIR006501 I 0.000
AEPI003923 Anopheles epiroticus AEPI003923 I 0.000
AFAF015236 Anopheles farauti AFAF015236 I 0.000
AFUN000621 Anopheles funestus AFUN000621 I 0.000
AGAP003177 Anopheles gambiae AGAP003177 I 0.000
Alligator_sinensis_CCG022139.1 Alligator sinensis Alligator_sinensis_CCG022139.1 I 0.000
AMEC003172 Anopheles melas AMEC003172 I 0.000
AMEM013272 Anopheles merus AMEM013272 I 0.000
AMIN002759 Anopheles minimus AMIN002759 I 0.000
AQUA008115 Anopheles quadriannulatus AQUA008115 I 0.000
ASIS001309 Anopheles sinensis ASIS001309 I 0.000
ASTEI00681 Anopheles stephensi ASTEI00681 I 0.000
BGIBMGA004944 Bombyx mori BGIBMGA004944 I 0.000
Cflo_05278--XP_623530.1_APIME Camponotus floridanus Cflo_05278--XP_623530.1_APIME I 0.000
CLEC011217 Cimex lectularius CLEC011217 I 0.000
Cmyd_10004970 Chelonia mydas Cmyd_10004970 I 0.000
CPIJ003297 Culex quinquefasciatus CPIJ003297 I 0.000
CpipJ_CPIJ003297 Culex pipiens CpipJ_CPIJ003297 I 0.000
ENSAMEG00000003472 Ailuropoda melanoleuca ENSAMEG00000003472 I 0.000
ENSAMXG00000012675 Astyanax mexicanus ENSAMXG00000012675 I 0.000
ENSBTAP00000023939-D1 Bos grunniens ENSBTAP00000023939-D1 I 0.000
ENSCPOG00000010172 Cavia porcellus ENSCPOG00000010172 I 0.000
ENSCSAG00000013429 Chlorocebus sabaeus ENSCSAG00000013429 I 0.000
ENSCSAVG00000010547 Ciona savignyi ENSCSAVG00000010547 I 0.000
ENSDNOG00000034422 Dasypus novemcinctus ENSDNOG00000034422 I 0.000
ENSFALG00000001190 Ficedula albicollis ENSFALG00000001190 I 0.000
ENSGALG00000028248 Gallus gallus ENSGALG00000028248 I 0.000
ENSGMOG00000003647 Gadus morhua ENSGMOG00000003647 I 0.000
ENSLACG00000016665 Latimeria chalumnae ENSLACG00000016665 I 0.000
ENSMICG00000013124 Microcebus murinus ENSMICG00000013124 I 0.000
ENSMPUG00000006859 Mustela putorius furo ENSMPUG00000006859 I 0.000
ENSNLEG00000014373 Nomascus leucogenys ENSNLEG00000014373 I 0.000
ENSOGAG00000034529 Otolemur garnettii ENSOGAG00000034529 I 0.000
ENSP00000351490 Macaca fascicularis ENSP00000351490 I 0.000
ENSPANG00000020361 Papio anubis ENSPANG00000020361 I 0.000
ENSPFOG00000013150 Poecilia formosa ENSPFOG00000013150 I 0.000
ENSPFOG00000017744 Poecilia formosa ENSPFOG00000017744 I 0.000
ENSPPYG00000005911 Pongo abelii ENSPPYG00000005911 I 0.000
ENSPSIG00000009674 Pelodiscus sinensis ENSPSIG00000009674 I 0.000
ENSSHAG00000014285 Sarcophilus harrisii ENSSHAG00000014285 I 0.000
ENSSSCG00000002282 Sus scrofa ENSSSCG00000002282 I 0.000
ENSSTOG00000028142 Ictidomys tridecemlineatus ENSSTOG00000028142 I 0.000
ENSTSYG00000007582 Tarsius syrichta ENSTSYG00000007582 I 0.000
ENSXMAG00000014355 Xiphophorus maculatus ENSXMAG00000014355 I 0.000
fgenesh2_pg.scaffold_132000064 Branchiostoma floridae fgenesh2_pg.scaffold_132000064 I 0.000
GB41968 Apis mellifera GB41968 I 0.000
gw.35.272.1 Branchiostoma floridae gw.35.272.1 I 0.000
HHAL010192-PA Halyomorpha halys HHAL010192-PA I 0.000
Hsal_16014--XP_623530.1_APIME Harpegnathos saltator Hsal_16014--XP_623530.1_APIME I 0.000
ISCW013570 Ixodes scapularis ISCW013570 I 0.000
KGM_17406 Danaus plexippus KGM_17406 I 0.000
LCUP011850 Lucilia cuprina LCUP011850 I 0.000
LDEC015014 Leptinotarsa decemlineata LDEC015014 I 0.000
LLOJ003470 Lutzomyia longipalpis LLOJ003470 I 0.000
LotgiG133235 Lottia gigantea LotgiG133235 I 0.000
max Xenopus tropicalis XB-GENE-6258209 I 0.000
MAX Canis familiaris ENSCAFG00000016212 I 0.000
MAX Myotis lucifugus ENSMLUG00000004318 I 0.000
MAX Macaca mulatta ENSMMUG00000004341 I 0.000
MAX Monodelphis domestica ENSMODG00000009712 I 0.000
Max Mus musculus ENSMUSG00000059436 D 0.000
MAX Ornithorhynchus anatinus ENSOANG00000005841 I 0.000
MAX Oryctolagus cuniculus ENSOCUG00000014439 I 0.000
MAX Ochotona princeps ENSOPRG00000016245 I 0.000
MAX Erinaceus europaeus ENSEEUG00000003973 I 0.000
MAX Meleagris gallopavo ENSMGAG00000004785 I 0.000
MAX Loxodonta africana ENSLAFG00000018437 I 0.000
MAX Gorilla gorilla ENSGGOG00000026047 I 0.000
MAX Choloepus hoffmanni ENSCHOG00000006957 I 0.000
MAX Callithrix jacchus ENSCJAG00000019702 I 0.000
max Danio rerio ENSDARG00000024844 I 0.000
MAX Equus caballus ENSECAG00000006923 I 0.000
MAX Echinops telfairi ENSETEG00000002967 I 0.000
MAX Felis catus ENSFCAG00000010347 I 0.000
MAX Homo sapiens ENSG00000125952 D 0.000
max Gasterosteus aculeatus ENSGACG00000007808 I 0.000
MAX Oryzias latipes ENSORLG00000016817 I 0.000
MAX Procavia capensis ENSPCAG00000000840 I 0.000
MAX Pan troglodytes ENSPTRG00000006449 I 0.000
max Takifugu rubripes ENSTRUG00000017815 I 0.000
max Tetraodon nigroviridis ENSTNIG00000016412 I 0.000
MAX Tetraodon nigroviridis ENSTNIG00000000407 I 0.000
MAX Tursiops truncatus ENSTTRG00000002693 I 0.000
MAX Tupaia belangeri ENSTBEG00000012645 I 0.000
MAX Sorex araneus ENSSARG00000010212 I 0.000
MAX Takifugu rubripes ENSTRUG00000014760 I 0.000
Max Rattus norvegicus ENSRNOG00000008049 I 0.000
max.L Xenopus laevis XB-GENE-6252877 I 0.000
max.S Xenopus laevis XB-GENE-6255913 I 0.000
MDOA012035 Musca domestica MDOA012035 I 0.000
Myotis_brandtii_MAX_10027131 Myotis brandtii Myotis_brandtii_MAX_10027131 I 0.000
NEMVEDRAFT_v1g80696 Nematostella vectensis NEMVEDRAFT_v1g80696 I 0.000
NV15216 Nasonia vitripennis NV15216 I 0.000
Ocbimv22020257m.g Octopus bimaculoides Ocbimv22020257m.g I 0.000
Ogr08511 Ophisaurus gracilis Ogr08511 I 0.000
PHUM220200 Pediculus humanus PHUM220200 I 0.000
Pvit_16227 Pogona vitticeps Pvit_16227 I 0.000
RPRC015255 Rhodnius prolixus RPRC015255 I 0.000
Sakowv30027986m.g Saccoglossus kowalevskii Sakowv30027986m.g I 0.000
SINV12716 Solenopsis invicta SINV12716 I 0.000
SPU_022163 Strongylocentrotus purpuratus SPU_022163 I 0.000
TC009976 Tribolium castaneum TC009976 I 0.000
tetur05g05490 Tetranychus urticae tetur05g05490 I 0.000
TriadG51792 Trichoplax adhaerens TriadG51792 I 0.000
YQE_10562 Dendroctonus ponderosae YQE_10562 I 0.000