CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000003712
(
Tarsius syrichta
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSTSYG00000003712
T305107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nr1i3
M09302_2.00
Mus musculus
DRGGTCANNNRAGTTYAN
NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_MOUSE.H11MO.0.C
0.976
0.885
NR1I3
M03924_2.00
Homo sapiens
RGKDYRNNNNRGKKYR
YRMMCYNNNNYRHMCY
SELEX
Nitta et al.(2015)
NR1I3_1
0.945
0.885
NR1I3
M05619_2.00
Homo sapiens
WDAGTTCAH
DTGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_HT-SELEX
0.945
0.885
NR1I3
M09281_2.00
Homo sapiens
DRGGTCANNNRAGTTYAN
NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_HUMAN.H11MO.0.C
0.945
0.885
NR1I3
M05620_2.00
Homo sapiens
WDAGTTCRN
NYGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_Methyl-HT-SELEX
0.945
0.885
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.768
0.639
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.768
0.639
VDR
M05877_2.00
Homo sapiens
HRRGTTCA
TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.768
0.639
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.768
0.639
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.768
0.639
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.768
0.639
VDR
M11116_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.768
0.639
VDR
M11117_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.768
0.639
VDR
M11118_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.768
0.639
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000003402
Nuclear receptor
9
73
RNCVVCGDRATGYHFHALTCEGCKGFFRRTVSKSAGPTCSFAGSCEVSKAQRRHCPACRQKXXXX
Links
Other
Nuclear receptor
family TFs
Other
Tarsius syrichta
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NR1I3
Otolemur garnettii
ENSOGAG00000013738
I
0.977
Nr1i3
Rattus norvegicus
ENSRNOG00000003260
I
0.976
Nr1i3
Mus musculus
ENSMUSG00000005677
D
0.976
ENSDORG00000001701
Dipodomys ordii
ENSDORG00000001701
I
0.975
NR1I3
Procavia capensis
ENSPCAG00000013933
I
0.966
NR1I3
Loxodonta africana
ENSLAFG00000001180
I
0.966
NR1I3
Dasypus novemcinctus
ENSDNOG00000045179
I
0.965
NR1I3
Canis familiaris
ENSCAFG00000012921
I
0.963
NR1I3
Equus caballus
ENSECAG00000020930
I
0.962
ENSMPUG00000014388
Mustela putorius furo
ENSMPUG00000014388
I
0.961
NR1I3
Oryctolagus cuniculus
ENSOCUG00000013537
I
0.960
NR1I3
Pteropus vampyrus
ENSPVAG00000005540
I
0.958
NR1I3
Felis catus
ENSFCAG00000000497
I
0.954
ENSP00000356959-D1
Bos grunniens
ENSP00000356959-D1
I
0.954
NR1I3
Bos taurus
ENSBTAG00000009215
I
0.954
NR1I3
Ochotona princeps
ENSOPRG00000003455
I
0.954
NR1I3
Sus scrofa
ENSSSCG00000006353
I
0.954
NR1I3
Sorex araneus
ENSSARG00000002684
I
0.954
NR1I3
Callithrix jacchus
ENSCJAG00000004783
I
0.949
NR1I3
Monodelphis domestica
ENSMODG00000005089
I
0.949
NR1I3
Erinaceus europaeus
ENSEEUG00000004981
I
0.948
ENSMEUG00000001987
Macropus eugenii
ENSMEUG00000001987
I
0.947
ENSNLEG00000014287
Nomascus leucogenys
ENSNLEG00000014287
I
0.945
NR1I3
Homo sapiens
ENSG00000143257
D
0.945
NR1I3
Pan troglodytes
ENSPTRG00000001582
I
0.945
ENSCSAG00000002676
Chlorocebus sabaeus
ENSCSAG00000002676
I
0.944
NR1I3
Macaca mulatta
ENSMMUG00000018128
I
0.944
ENSP00000356959
Macaca fascicularis
ENSP00000356959
I
0.944
ENSPANG00000014194
Papio anubis
ENSPANG00000014194
I
0.944
ENSSHAG00000016687
Sarcophilus harrisii
ENSSHAG00000016687
I
0.943
NR1I3
Cavia porcellus
ENSCPOG00000015331
I
0.937
NR1I3
Gorilla gorilla
ENSGGOG00000005724
I
0.936
ENSOARG00000009965
Ovis aries
ENSOARG00000009965
I
0.932
ENSSTOG00000003818
Ictidomys tridecemlineatus
ENSSTOG00000003818
I
0.929
ENSAMEG00000015383
Ailuropoda melanoleuca
ENSAMEG00000015383
I
0.923
Pvit_09406
Pogona vitticeps
Pvit_09406
I
0.813
Ogr03312
Ophisaurus gracilis
Ogr03312
I
0.813
Pvit_09404
Pogona vitticeps
Pvit_09404
I
0.813
VDR
Taeniopygia guttata
ENSTGUG00000017093
I
0.771
Gfo_R005027
Geospiza fortis
Gfo_R005027
I
0.771
Aan_R009572
Calypte anna
Aan_R009572
I
0.771
ENSGALG00000026166
Gallus gallus
ENSGALG00000026166
I
0.771
VDR
Meleagris gallopavo
ENSMGAG00000004846
I
0.771
ENSPPYG00000004448
Pongo abelii
ENSPPYG00000004448
I
0.768
ENSP00000229022-D1
Bos grunniens
ENSP00000229022-D1
I
0.768
ENSMMUP00000008847
Macaca fascicularis
ENSMMUP00000008847
I
0.768
Myotis_brandtii_VDR_10022134
Myotis brandtii
Myotis_brandtii_VDR_10022134
I
0.768
Vdr
Rattus norvegicus
ENSRNOG00000054420
I
0.768
VDR
Tupaia belangeri
ENSTBEG00000005717
I
0.768
VDR
Pteropus vampyrus
ENSPVAG00000011085
I
0.768
VDR
Sus scrofa
ENSSSCG00000020864
I
0.768
VDR
Tursiops truncatus
ENSTTRG00000012578
I
0.768
ENSSTOG00000026741
Ictidomys tridecemlineatus
ENSSTOG00000026741
I
0.768
Vdr
Mus musculus
ENSMUSG00000022479
D
0.768
VDR
Felis catus
ENSFCAG00000024594
I
0.768
VDR
Erinaceus europaeus
ENSEEUG00000011116
I
0.768
VDR
Homo sapiens
ENSG00000111424
D
0.768
VDR
Gorilla gorilla
ENSGGOG00000016473
I
0.768
ENSPANG00000011327
Papio anubis
ENSPANG00000011327
I
0.768
VDR
Equus caballus
ENSECAG00000015822
I
0.768
VDR
Dasypus novemcinctus
ENSDNOG00000039161
I
0.768
ENSCHOG00000008514
Choloepus hoffmanni
ENSCHOG00000008514
I
0.768
VDR
Canis familiaris
ENSCAFG00000009103
I
0.768
VDR
Callithrix jacchus
ENSCJAG00000015018
I
0.768
ENSCPOG00000006025
Cavia porcellus
ENSCPOG00000006025
I
0.768
ENSCSAG00000006576
Chlorocebus sabaeus
ENSCSAG00000006576
I
0.768
ENSMEUG00000014791
Macropus eugenii
ENSMEUG00000014791
I
0.768
VDR
Loxodonta africana
ENSLAFG00000006418
I
0.768
VDR
Bos taurus
ENSBTAG00000016414
I
0.768
ENSAMEG00000013706
Ailuropoda melanoleuca
ENSAMEG00000013706
I
0.768
ENSNLEG00000017900
Nomascus leucogenys
ENSNLEG00000017900
I
0.768
ENSOARG00000019372
Ovis aries
ENSOARG00000019372
I
0.768
VDR
Otolemur garnettii
ENSOGAG00000005480
I
0.768
VDR
Oryctolagus cuniculus
ENSOCUG00000027507
I
0.768
VDR
Microcebus murinus
ENSMICG00000009017
I
0.768
ENSMPUG00000000419
Mustela putorius furo
ENSMPUG00000000419
I
0.768
VDR
Myotis lucifugus
ENSMLUG00000000912
I
0.768
VDR
Macaca mulatta
ENSMMUG00000006727
I
0.768
ENSMODG00000028774
Monodelphis domestica
ENSMODG00000028774
I
0.768
Afo_R013462
Aptenodytes forsteri
Afo_R013462
I
0.755
ENSPSIG00000004437
Pelodiscus sinensis
ENSPSIG00000004437
I
0.748
Cmyd_10001928
Chelonia mydas
Cmyd_10001928
I
0.745
NR1I3
Echinops telfairi
ENSETEG00000015760
I
0.511