ENSXMAG00000003990 (Xiphophorus maculatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSXMAG00000003990 T305213_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr1i2
M09316_2.00 		Mus musculus
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C 		0.857 0.643
NR1I2
M03925_2.00 		Homo sapiens
RGKKCRNNVRGKKCR
YGMMCYBNNYGMMCY		 SELEX
Nitta et al.(2015)
NR1I2_1 		0.835 0.643
NR1I2
M05625_2.00 		Homo sapiens
VRGTTCRNNSRGKTCRH
DYGAMCYSNNYGAACYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX 		0.835 0.643
NR1I2
M09283_2.00 		Homo sapiens
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C 		0.835 0.643
NR1I2
M05626_2.00 		Homo sapiens
VRGKKCRNNVRGKKCRN
NYGMMCYBNNYGMMCYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX 		0.835 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000004022 Nuclear receptor 48 117

Links

Other Nuclear receptor family TFs
Other Xiphophorus maculatus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I 0.986
nr1i2 Oryzias latipes ENSORLG00000017953 I 0.975
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.915
nr1i2 Takifugu rubripes ENSTRUG00000003245 I 0.911
ENSONIG00000014385 Oreochromis niloticus ENSONIG00000014385 I 0.903
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.869
NR1I2 Felis catus ENSFCAG00000006092 I 0.862
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.862
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.857
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.857
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.857
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.857
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.857
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.848
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.848
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.837
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.835
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.835
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.835
NR1I2 Equus caballus ENSECAG00000008728 I 0.835
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.835
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.835
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.835
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.835
NR1I2 Homo sapiens ENSG00000144852 D 0.835
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.835
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.822
NR1I2 Bos taurus ENSBTAG00000019557 I 0.818
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.807
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.807
nr1i2 Danio rerio ENSDARG00000029766 I 0.795
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.791
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.781
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.766
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I 0.760
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.750