kni (Drosophila simulans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0044187 T305288_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
kni
M06557_2.00
Drosophila melanogaster
AAWNTAGRGCAV

BTGCYCTANWTT
B1H
Mathelier et al.(2014)
MA0451.1
0.989 1.000
kni
M06419_2.00
Drosophila melanogaster
RAWNKVGNWC

GWNCBMNWTY
B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320
0.989 1.000
kni
M06420_2.00
Drosophila melanogaster
AAWNTAGRGCAV

BTGCYCTANWTT
B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320
0.989 1.000
kni
M06421_2.00
Drosophila melanogaster
RWAANTRGRNCA

TGNYCYANTTWY
B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320
0.989 1.000
kni
M08225_2.00
Drosophila melanogaster
YAGNGYTGYC

GRCARCNCTR
ChIP-seq
Contrino et al.(2012)
Mf24
0.989 1.000
kni
M09687_2.00
Drosophila melanogaster
NAAWNKRGADCAV

BTGHTCYMNWTTN
Misc
Kulakovskiy et al.(2009)
kni
0.989 1.000
kni
M11189_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KNI_Q6
0.989 1.000
AGAP010438
M02389_2.00
Anopheles gambiae
NRGDKCRNN

NNYGMHCYN
PBM
Weirauch et al.(2014)
pTH6429
0.983 0.871
knrl
M03930_2.00
Drosophila melanogaster
AWNTRGRKCAN

NTGMYCYANWT
SELEX
Nitta et al.(2015)
knrl_1
0.981 0.857
knrl
M03931_2.00
Drosophila melanogaster
AWBBGTAACR

YGTTACVVWT
SELEX
Nitta et al.(2015)
knrl_2
0.981 0.857
knrl
M06422_2.00
Drosophila melanogaster
AAABTRGRKCA

TGMYCYAVTTT
B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323
0.981 0.857
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA

TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.958 0.800
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV

BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.958 0.800
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0210574 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Drosophila simulans TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cers2a Danio rerio ENSDARG00000013704 N 0.000
cers3b Tetraodon nigroviridis ENSTNIG00000019226 N 0.000
cers4a Takifugu rubripes ENSTRUG00000012847 N 0.000
cers4a Tetraodon nigroviridis ENSTNIG00000015527 N 0.000
ENSAMXG00000004106 Astyanax mexicanus ENSAMXG00000004106 N 0.000
ENSLOCG00000012751 Lepisosteus oculatus ENSLOCG00000012751 N 0.000
ENSMGAG00000006564 Meleagris gallopavo ENSMGAG00000006564 N 0.000
ENSONIG00000015112 Oreochromis niloticus ENSONIG00000015112 N 0.000
ENSPFOG00000019166 Poecilia formosa ENSPFOG00000019166 N 0.000
ENSTNIG00000001899 Tetraodon nigroviridis ENSTNIG00000001899 N 0.000
ENSXMAG00000003751 Xiphophorus maculatus ENSXMAG00000003751 N 0.000