GA18413 (Drosophila pseudoobscura)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0078415 T305300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.987 0.986
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.987 0.986
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.987 0.986
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.985 0.943
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.979 0.843
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.979 0.843
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.979 0.843
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.979 0.843
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.979 0.843
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.979 0.843
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.979 0.843
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.964 0.829
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.964 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0286049 Nuclear receptor 12 82

Links

Other Nuclear receptor family TFs
Other Drosophila pseudoobscura TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GJ13774 Drosophila virilis FBgn0200993 I 0.987
GK10566 Drosophila willistoni FBgn0212581 I 0.987
GH16982 Drosophila grimshawi FBgn0124453 I 0.987
GD12173 Drosophila simulans FBgn0183909 I 0.987
GF24122 Drosophila ananassae FBgn0101116 I 0.987
GI11900 Drosophila mojavensis FBgn0134658 I 0.987
GG13294 Drosophila erecta FBgn0105566 I 0.987
GM22199 Drosophila sechellia FBgn0177069 I 0.987
GE22392 Drosophila yakuba FBgn0239615 I 0.987
knrl Drosophila melanogaster FBgn0001323 D 0.987
HMEL010451 Heliconius melpomene HMEL010451 I 0.986
KGM_10290 Danaus plexippus KGM_10290 I 0.986
AFUN003486 Anopheles funestus AFUN003486 I 0.985
LDEC003050 Leptinotarsa decemlineata LDEC003050 I 0.985
LCUP004922 Lucilia cuprina LCUP004922 I 0.985
AMEM014965 Anopheles merus AMEM014965 I 0.985
TC003413 Tribolium castaneum TC003413 I 0.985
AEPI004043 Anopheles epiroticus AEPI004043 I 0.985
GB48727 Apis mellifera GB48727 I 0.985
AATE013762 Anopheles atroparvus AATE013762 I 0.985
ACUA011505 Anopheles culicifacies ACUA011505 I 0.985
AAEL011231 Aedes aegypti AAEL011231 I 0.985
ADIR005732 Anopheles dirus ADIR005732 I 0.985
AALB007603 Anopheles albimanus AALB007603 I 0.985
AARA005929 Anopheles arabiensis AARA005929 I 0.985
AFAF014433 Anopheles farauti AFAF014433 I 0.985
PPAI002202 Phlebotomus papatasi PPAI002202 I 0.985
ASIS019127 Anopheles sinensis ASIS019127 I 0.985
MDOA008593 Musca domestica MDOA008593 I 0.985
AQUA005997 Anopheles quadriannulatus AQUA005997 I 0.985
AMIN004996 Anopheles minimus AMIN004996 I 0.985
AGAP010438 Anopheles gambiae AGAP010438 D 0.985
PHUM470190 Pediculus humanus PHUM470190 I 0.983
Cflo_03607--XP_395932.2_APIME Camponotus floridanus Cflo_03607--XP_395932.2_APIME I 0.982
HHAL001315-PA Halyomorpha halys HHAL001315-PA I 0.981
DAPPUDRAFT_290668 Daphnia pulex DAPPUDRAFT_290668 I 0.981
LCUP004920 Lucilia cuprina LCUP004920 I 0.980
Hsal_02927--XP_395932.2_APIME Harpegnathos saltator Hsal_02927--XP_395932.2_APIME I 0.980
MDOA012160 Musca domestica MDOA012160 I 0.980
GL12762 Drosophila persimilis FBgn0150368 I 0.979
GF24121 Drosophila ananassae FBgn0101115 I 0.979
GG13292 Drosophila erecta FBgn0105564 I 0.979
GA18381 Drosophila pseudoobscura FBgn0078384 I 0.979
kni Drosophila sechellia FBgn0044208 I 0.979
GI11896 Drosophila mojavensis FBgn0134654 I 0.979
GH16981 Drosophila grimshawi FBgn0124452 I 0.979
kni Drosophila melanogaster FBgn0001320 D 0.979
kni Drosophila virilis FBgn0013118 I 0.979
kni Drosophila simulans FBgn0044187 I 0.979
GE22389 Drosophila yakuba FBgn0239612 I 0.979
GK10545 Drosophila willistoni FBgn0212560 I 0.979
ACEP13260 Atta cephalotes ACEP13260 I 0.978
TC003409 Tribolium castaneum TC003409 I 0.978
KGM_21348 Danaus plexippus KGM_21348 I 0.978
AGAP028221 Anopheles gambiae AGAP028221 I 0.978
PHUM468660 Pediculus humanus PHUM468660 I 0.978
SINV19531 Solenopsis invicta SINV19531 I 0.977
LCUP004919 Lucilia cuprina LCUP004919 I 0.976
MDOA002495 Musca domestica MDOA002495 I 0.976
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I 0.975
CLEC025065 Cimex lectularius CLEC025065 I 0.975
L798_11128 Zootermopsis nevadensis L798_11128 I 0.975
RPRC003216 Rhodnius prolixus RPRC003216 I 0.975
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I 0.975
CLEC007515 Cimex lectularius CLEC007515 I 0.975
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I 0.975
GB51231 Apis mellifera GB51231 I 0.974
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I 0.974
SINV19432 Solenopsis invicta SINV19432 I 0.974
NV16468 Nasonia vitripennis NV16468 I 0.974
ACEP12797 Atta cephalotes ACEP12797 I 0.974
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I 0.974
SMAR012614 Strigamia maritima SMAR012614 I 0.969
tetur34g00430 Tetranychus urticae tetur34g00430 I 0.965
GH16373 Drosophila grimshawi FBgn0123844 I 0.964
GG16225 Drosophila erecta FBgn0108460 I 0.964
eg Drosophila melanogaster FBgn0000560 D 0.964
GI11566 Drosophila mojavensis FBgn0134326 I 0.964
GA20312 Drosophila pseudoobscura FBgn0080307 I 0.964
GF25170 Drosophila ananassae FBgn0102162 I 0.964
GD15001 Drosophila simulans FBgn0186673 I 0.964
GE19793 Drosophila yakuba FBgn0237126 I 0.964
GK17344 Drosophila willistoni FBgn0219343 I 0.964
GE23274 Drosophila yakuba FBgn0240471 I 0.964
GL24862 Drosophila persimilis FBgn0162450 I 0.964
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I 0.963
GJ11245 Drosophila virilis FBgn0198506 I 0.961
GL12764 Drosophila persimilis FBgn0150370 I 0.957
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I 0.956
GB52331 Apis mellifera GB52331 I 0.928
nRc.2.0.1.g43935 Romanomermis culicivorax nRc.2.0.1.g43935 I 0.885
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I 0.807
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I 0.800