CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG137551
(
Helobdella robusta
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
HelroG137551
T305561_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR
YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.750
0.571
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP137551
Nuclear receptor
2
73
KVCGVCGDRALSYNFDAISCESCKAFFRRNAPKNLDYFKCAYDGRCRMDVSNRRFCKRCRLLKKCFEIGMRR
Links
Other
Nuclear receptor
family TFs
Other
Helobdella robusta
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10027031
Crassostrea gigas
CGI_10027031
I
0.982
Ocbimv22029529m.g
Octopus bimaculoides
Ocbimv22029529m.g
I
0.979
CapteG119973
Capitella teleta
CapteG119973
I
0.979
HelroG137640
Helobdella robusta
HelroG137640
I
0.976
GB52904
Apis mellifera
GB52904
I
0.853
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.853
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.853
NV10187
Nasonia vitripennis
NV10187
I
0.853
L798_15710
Zootermopsis nevadensis
L798_15710
I
0.853
HelroG99849
Helobdella robusta
HelroG99849
I
0.848
ACEP16468
Atta cephalotes
ACEP16468
I
0.846
LotgiG122759
Lottia gigantea
LotgiG122759
N
0.813
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.799
BGLB005077
Biomphalaria glabrata
BGLB005077
I
0.788
AFAF019254
Anopheles farauti
AFAF019254
I
0.787
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
0.786
ADIR005534
Anopheles dirus
ADIR005534
I
0.783
CGI_10007907
Crassostrea gigas
CGI_10007907
I
0.781
GA11197
Drosophila pseudoobscura
FBgn0071252
I
0.769
Hr96
Drosophila grimshawi
FBgn0020174
I
0.769
GI22223
Drosophila mojavensis
FBgn0144951
I
0.769
LCUP002913
Lucilia cuprina
LCUP002913
I
0.769
GJ24344
Drosophila virilis
FBgn0211424
I
0.769
MDOA002084
Musca domestica
MDOA002084
I
0.769
KGM_05575
Danaus plexippus
KGM_05575
I
0.768
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
0.768
HMEL016865
Heliconius melpomene
HMEL016865
I
0.768
MCINX005291
Melitaea cinxia
MCINX005291
I
0.766
GK14276
Drosophila willistoni
FBgn0216282
I
0.766
CapteG121837
Capitella teleta
CapteG121837
I
0.763
LotgiG100616
Lottia gigantea
LotgiG100616
I
0.763
CapteG224377
Capitella teleta
CapteG224377
I
0.763
CGI_10020896
Crassostrea gigas
CGI_10020896
I
0.752
GG11347
Drosophila erecta
FBgn0103647
I
0.750
Hr96
Drosophila melanogaster
FBgn0015240
D
0.750
GF16320
Drosophila ananassae
FBgn0093341
I
0.750
GM17786
Drosophila sechellia
FBgn0172693
I
0.750
GE23543
Drosophila yakuba
FBgn0240719
I
0.750
GD21158
Drosophila simulans
FBgn0192609
I
0.750
ASIS011648
Anopheles sinensis
ASIS011648
I
0.749
AATE006049
Anopheles atroparvus
AATE006049
I
0.749
AMIN004130
Anopheles minimus
AMIN004130
I
0.747
AMEM008752
Anopheles merus
AMEM008752
I
0.747
AGAP004224
Anopheles gambiae
AGAP004224
I
0.747
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
0.747
AMEC016766
Anopheles melas
AMEC016766
I
0.747
ASTEI03690
Anopheles stephensi
ASTEI03690
I
0.747
AFUN010189
Anopheles funestus
AFUN010189
I
0.747
ACOM033140
Anopheles coluzzii
ACOM033140
I
0.747
AARA011580
Anopheles arabiensis
AARA011580
I
0.747
AMAM022585
Anopheles maculatus
AMAM022585
I
0.747
ACUA008166
Anopheles culicifacies
ACUA008166
I
0.747
AEPI000232
Anopheles epiroticus
AEPI000232
I
0.747
AALB008395
Anopheles albimanus
AALB008395
I
0.745
ADAC003041
Anopheles darlingi
ADAC003041
I
0.745