CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG137617
(
Helobdella robusta
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
HelroG137617
T305562_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr39
M03942_2.00
Drosophila melanogaster
CAAGGHCRN
NYGDCCTTG
SELEX
Nitta et al.(2015)
Hr39_1
0.878
0.529
Hr39
M03943_2.00
Drosophila melanogaster
CAAGGYCRH
DYGRCCTTG
SELEX
Nitta et al.(2015)
Hr39_2
0.878
0.529
Esrrg
M00817_2.00
Mus musculus
VAAGGTCA
TGACCTTB
PBM
Weirauch et al.(2013)
pTH3841
0.856
0.671
ESRRB
M03367_2.00
Homo sapiens
TCAAGGTCAWH
DWTGACCTTGA
SELEX
Jolma et al.(2013)
ESRRB_1
0.856
0.671
ESRRG
M03412_2.00
Homo sapiens
AAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTT
SELEX
Jolma et al.(2013)
ESRRG_1
0.856
0.671
ESRRG
M03413_2.00
Homo sapiens
AAGGTCANHCAAGGTCA
TGACCTTGDNTGACCTT
SELEX
Jolma et al.(2013)
ESRRG_2
0.856
0.671
ESRRG
M03414_2.00
Homo sapiens
YSAAGGTCAH
DTGACCTTSR
SELEX
Jolma et al.(2013)
ESRRG_3
0.856
0.671
ESRRB
M05595_2.00
Homo sapiens
BBSAAGGTCRH
DYGACCTTSVV
SELEX
Yin et al.(2017)
ESRRB_eDBD_HT-SELEX
0.856
0.671
ESRRG
M05673_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_eDBD_HT-SELEX
0.856
0.671
ESRRG
M05675_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_FL_HT-SELEX
0.856
0.671
Esrrb
M08034_2.00
Mus musculus
NNBYCAAGGTCANNB
VNNTGACCTTGRVNN
ChIP-seq
Chen et al.(2011)
SRP000217_Esrrb
0.856
0.671
ESRRB
M09272_2.00
Homo sapiens
BCAAGGTCA
TGACCTTGV
Misc
Kulakovskiy et al.(2013)
ERR2_HUMAN.H11MO.0.A
0.856
0.671
ESRRG
M09296_2.00
Homo sapiens
TCAAGGTCA
TGACCTTGA
Misc
Kulakovskiy et al.(2013)
ERR3_HUMAN.H11MO.0.B
0.856
0.671
Esrrb
M09312_2.00
Mus musculus
NHDBTCAAGGTCANNBN
NVNNTGACCTTGAVHDN
Misc
Kulakovskiy et al.(2013)
ERR2_MOUSE.H11MO.0.A
0.856
0.671
Esrrg
M09321_2.00
Mus musculus
BSAAGGWCAB
VTGWCCTTSV
Misc
Kulakovskiy et al.(2013)
ERR3_MOUSE.H11MO.0.C
0.856
0.671
ESRRB
M11129_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_01
0.856
0.671
ESRRB
M11130_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_Q2
0.856
0.671
ESRRB
M11131_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_Q3
0.856
0.671
ESRRG
M11185_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR3_Q2_01
0.856
0.671
ESRRG
M11186_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR3_Q2
0.856
0.671
ESRRB
M05596_2.00
Homo sapiens
NNSAAGGTCRH
DYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRB_eDBD_Methyl-HT-SELEX
0.856
0.671
ESRRG
M05674_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_eDBD_Methyl-HT-SELEX
0.856
0.671
ESRRG
M05676_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_FL_Methyl-HT-SELEX
0.856
0.671
Esrra
M00183_2.00
Mus musculus
VAAGGTCAH
DTGACCTTB
PBM
Badis et al.(2009)
Esrra_2190
0.850
0.643
ESRRA
M03397_2.00
Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN
SELEX
Jolma et al.(2013)
ESRRA_1
0.850
0.643
ESRRA
M03398_2.00
Homo sapiens
AAGGTCAWHCAAGGTCA
TGACCTTGDWTGACCTT
SELEX
Jolma et al.(2013)
ESRRA_2
0.850
0.643
ESRRA
M03399_2.00
Homo sapiens
SAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTS
SELEX
Jolma et al.(2013)
ESRRA_3
0.850
0.643
ESRRA
M03400_2.00
Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN
SELEX
Jolma et al.(2013)
ESRRA_4
0.850
0.643
ESRRA
M03401_2.00
Homo sapiens
RAGGTCABNCAAGGTCA
TGACCTTGNVTGACCTY
SELEX
Jolma et al.(2013)
ESRRA_5
0.850
0.643
ESRRA
M03402_2.00
Homo sapiens
VAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTB
SELEX
Jolma et al.(2013)
ESRRA_6
0.850
0.643
Esrra
M03430_2.00
Mus musculus
DAGGTYAKTMAAGGTCA
TGACCTTKAMTRACCTH
SELEX
Jolma et al.(2013)
Esrra_1
0.850
0.643
Esrra
M03431_2.00
Mus musculus
KTCAAGGTCAT
ATGACCTTGAM
SELEX
Jolma et al.(2013)
Esrra_2
0.850
0.643
ESRRA
M05655_2.00
Homo sapiens
NNSAAGGTCAN
NTGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_eDBD_HT-SELEX
0.850
0.643
ESRRA
M05657_2.00
Homo sapiens
NNSAAGGTCAH
DTGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_FL_HT-SELEX
0.850
0.643
ESRRA
M07988_2.00
Homo sapiens
RGGKCASMNTGMCCY
RGGKCANKSTGMCCY
ChIP-seq
Gerstein et al.(2012)
ECC-1_ERALPHA_HudsonAlpha
0.850
0.643
ESRRA
M07989_2.00
Homo sapiens
NNRGGTCABNNTGHCCYNN
NNRGGDCANNVTGACCYNN
ChIP-seq
Gerstein et al.(2012)
T-47D_ERALPHA_HudsonAlpha
0.850
0.643
ESRRA
M09290_2.00
Homo sapiens
BYSAAGGTCANNNNN
NNNNNTGACCTTSRV
Misc
Kulakovskiy et al.(2013)
ERR1_HUMAN.H11MO.0.A
0.850
0.643
Esrra
M09319_2.00
Mus musculus
NNBYCAAGGTCA
TGACCTTGRVNN
Misc
Kulakovskiy et al.(2013)
ERR1_MOUSE.H11MO.0.A
0.850
0.643
ESRRA
M11168_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q2_01
0.850
0.643
ESRRA
M11169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q2
0.850
0.643
ESRRA
M11170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q3
0.850
0.643
ESRRA
M11171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESRRA_10
0.850
0.643
ESRRA
M05656_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_eDBD_Methyl-HT-SELEX
0.850
0.643
ESRRA
M05658_2.00
Homo sapiens
NBSAAGGTCRH
DYGACCTTSVN
SELEX
Yin et al.(2017)
ESRRA_FL_Methyl-HT-SELEX
0.850
0.643
ERR
M03941_2.00
Drosophila melanogaster
BSAAGGTCRH
DYGACCTTSV
SELEX
Nitta et al.(2015)
ERR_1
0.839
0.657
ERR
M06433_2.00
Drosophila melanogaster
MAAGGTCA
TGACCTTK
B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849
0.839
0.657
nhr-25
M08226_2.00
Caenorhabditis elegans
MAAGGTCA
TGACCTTK
ChIP-seq
Contrino et al.(2012)
Mw160
0.794
0.543
NR5A2
M05589_2.00
Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1
0.779
0.571
NR5A2
M05590_2.00
Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2
0.779
0.571
NR5A2
M05591_2.00
Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3
0.779
0.571
NR5A2
M09271_2.00
Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B
0.779
0.571
NR5A2
M11126_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5_01
0.779
0.571
NR5A2
M11127_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q5
0.779
0.571
NR5A2
M11128_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRH1_Q6
0.779
0.571
NR5A2
M05592_2.00
Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1
0.779
0.571
NR5A2
M05593_2.00
Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2
0.779
0.571
NR5A2
M05594_2.00
Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3
0.779
0.571
Nr5a2
M00816_2.00
Mus musculus
VAAGGTCR
YGACCTTB
PBM
Weirauch et al.(2013)
pTH3468
0.772
0.543
Nr5a2
M08158_2.00
Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB
ChIP-seq
Mathelier et al.(2014)
MA0505.1
0.772
0.543
Nr5a2
M09320_2.00
Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A
0.772
0.543
Nr5a2
M09616_2.00
Mus musculus
BYCAAGGYCA
TGRCCTTGRV
Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295
0.772
0.543
Nr5a2
M09615_2.00
Mus musculus
BYCAAGGYCA
TGRCCTTGRV
Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019
0.772
0.543
NR5A1
M05613_2.00
Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN
SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX
0.762
0.571
Nr5a1
M09322_2.00
Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN
Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B
0.762
0.571
NR5A1
M11142_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5_01
0.762
0.571
NR5A1
M11143_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q5
0.762
0.571
NR5A1
M11144_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6_01
0.762
0.571
NR5A1
M11145_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SF1_Q6
0.762
0.571
NR5A1
M05614_2.00
Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN
SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX
0.762
0.571
ftz-f1
M02407_2.00
Drosophila melanogaster
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH5709
0.762
0.543
ftz-f1
M06417_2.00
Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
0.762
0.543
ftz-f1
M06418_2.00
Drosophila melanogaster
AAGGTCA
TGACCTT
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
0.762
0.543
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP137617
Nuclear receptor
1
70
QLCVVCGDSSSGLHYGVLSCEACKAFFKRTVQGNIRYVCSSDGKCEITKKARRSCPACRMDKCLTMGMLR
Links
Other
Nuclear receptor
family TFs
Other
Helobdella robusta
TFs
572 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy