CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG138305
(
Helobdella robusta
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
HelroG138305
T305565_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr39
M03942_2.00
Drosophila melanogaster
CAAGGHCRN
NYGDCCTTG
SELEX
Nitta et al.(2015)
Hr39_1
0.800
0.537
Hr39
M03943_2.00
Drosophila melanogaster
CAAGGYCRH
DYGRCCTTG
SELEX
Nitta et al.(2015)
Hr39_2
0.800
0.537
nhr-25
M08226_2.00
Caenorhabditis elegans
MAAGGTCA
TGACCTTK
ChIP-seq
Contrino et al.(2012)
Mw160
0.788
0.537
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP138305
Nuclear receptor
1
67
CRICGDRSSGNHYGIVSCEGCKSFFKRAVRNGSQFRCKKFGACEVTLTSRTQCPGCRMDRCLKMGMK
Links
Other
Nuclear receptor
family TFs
Other
Helobdella robusta
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy