LotgiG120392 (Lottia gigantea)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 LotgiG120392 T305713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN

NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.774 0.657
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN

NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.774 0.657
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN

NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.774 0.657
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA

TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.774 0.657
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA

TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.774 0.657
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW

WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.774 0.657
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA

TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.774 0.657
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN

NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.774 0.657
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN

NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.774 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP120392 Nuclear receptor 8 77

Links

Other Nuclear receptor family TFs
Other Lottia gigantea TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
STAT6 Homo sapiens ENSG00000166888 D 0.000
Stat6 Mus musculus ENSMUSG00000002147 D 0.000
ENSSSCG00000026524 Sus scrofa ENSSSCG00000026524 I 0.000
ENSSSCG00000025960 Sus scrofa ENSSSCG00000025960 I 0.000
ENSSHAG00000006372 Sarcophilus harrisii ENSSHAG00000006372 I 0.000
Stat6 Rattus norvegicus ENSRNOG00000025023 I 0.000
ENSPPYG00000004680 Pongo abelii ENSPPYG00000004680 I 0.000
STAT6 Procavia capensis ENSPCAG00000009432 I 0.000
STAT6 Ochotona princeps ENSOPRG00000013409 I 0.000
ENSSTOG00000013280 Ictidomys tridecemlineatus ENSSTOG00000013280 I 0.000
STAT6 Tupaia belangeri ENSTBEG00000013664 I 0.000
ENSTGUG00000015716 Taeniopygia guttata ENSTGUG00000015716 I 0.000
Ogr04374 Ophisaurus gracilis Ogr04374 I 0.000
Myotis_brandtii_STAT6_10018366 Myotis brandtii Myotis_brandtii_STAT6_10018366 I 0.000
Gfo_R015302 Geospiza fortis Gfo_R015302 I 0.000
Cmyd_10002722 Chelonia mydas Cmyd_10002722 I 0.000
Alligator_sinensis_CCG009324.2 Alligator sinensis Alligator_sinensis_CCG009324.2 I 0.000
Afo_R009816 Aptenodytes forsteri Afo_R009816 I 0.000
Aan_R000713 Calypte anna Aan_R000713 I 0.000
STAT6 Tursiops truncatus ENSTTRG00000013064 I 0.000
STAT6 Otolemur garnettii ENSOGAG00000005002 I 0.000
STAT6 Oryctolagus cuniculus ENSOCUG00000007929 I 0.000
ENSNLEG00000017396 Nomascus leucogenys ENSNLEG00000017396 I 0.000
ENSFALG00000000376 Ficedula albicollis ENSFALG00000000376 I 0.000
STAT6 Equus caballus ENSECAG00000008705 I 0.000
STAT6 Dasypus novemcinctus ENSDNOG00000033099 I 0.000
ENSCSAG00000004973 Chlorocebus sabaeus ENSCSAG00000004973 I 0.000
STAT6 Callithrix jacchus ENSCJAG00000010327 I 0.000
STAT6 Canis familiaris ENSCAFG00000000163 I 0.000
STAT6 Bos taurus ENSBTAG00000006335 I 0.000
ENSAMEG00000004487 Ailuropoda melanoleuca ENSAMEG00000004487 I 0.000
STAT6 Felis catus ENSFCAG00000014571 I 0.000
STAT6 Anolis carolinensis ENSACAG00000009680 I 0.000
ENSMPUG00000001746 Mustela putorius furo ENSMPUG00000001746 I 0.000
STAT6 Monodelphis domestica ENSMODG00000019411 I 0.000
STAT6 Myotis lucifugus ENSMLUG00000006689 I 0.000
STAT6 Microcebus murinus ENSMICG00000009087 I 0.000
ENSMGAG00000006798 Meleagris gallopavo ENSMGAG00000006798 I 0.000
ENSMEUG00000016670 Macropus eugenii ENSMEUG00000016670 I 0.000
STAT6 Loxodonta africana ENSLAFG00000005970 I 0.000
ENSGALG00000025956 Gallus gallus ENSGALG00000025956 I 0.000
Pvit_05823 Pogona vitticeps Pvit_05823 N 0.000