CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG59139
(
Lottia gigantea
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
LotgiG59139
T305738_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR
YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.884
0.729
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP59139
Nuclear receptor
7
76
KFCGVCGDRALGYNFNAITCESCKAFFRRNALKKKKMKCLFKGNCIIDVRTRRFCPCCRLQKCLSIGMKE
Links
Other
Nuclear receptor
family TFs
Other
Lottia gigantea
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB005044
Biomphalaria glabrata
BGLB005044
I
0.969
CapteG121837
Capitella teleta
CapteG121837
I
0.947
CapteG224377
Capitella teleta
CapteG224377
I
0.947
Ocbimv22034138m.g
Octopus bimaculoides
Ocbimv22034138m.g
I
0.925
L798_15710
Zootermopsis nevadensis
L798_15710
I
0.916
PPAI005921
Phlebotomus papatasi
PPAI005921
I
0.891
AALB008395
Anopheles albimanus
AALB008395
I
0.888
ADAC003041
Anopheles darlingi
ADAC003041
I
0.888
AFAF019254
Anopheles farauti
AFAF019254
I
0.887
GG11347
Drosophila erecta
FBgn0103647
I
0.884
GF16320
Drosophila ananassae
FBgn0093341
I
0.884
GI22223
Drosophila mojavensis
FBgn0144951
I
0.884
GJ24344
Drosophila virilis
FBgn0211424
I
0.884
GE23543
Drosophila yakuba
FBgn0240719
I
0.884
GA11197
Drosophila pseudoobscura
FBgn0071252
I
0.884
GD21158
Drosophila simulans
FBgn0192609
I
0.884
GM17786
Drosophila sechellia
FBgn0172693
I
0.884
MDOA002084
Musca domestica
MDOA002084
I
0.884
Hr96
Drosophila grimshawi
FBgn0020174
I
0.884
LCUP002913
Lucilia cuprina
LCUP002913
I
0.884
Hr96
Drosophila melanogaster
FBgn0015240
D
0.884
AGAP004224
Anopheles gambiae
AGAP004224
I
0.883
AMEC016766
Anopheles melas
AMEC016766
I
0.883
AMAM022585
Anopheles maculatus
AMAM022585
I
0.883
AFUN010189
Anopheles funestus
AFUN010189
I
0.883
ACUA008166
Anopheles culicifacies
ACUA008166
I
0.883
ACOM033140
Anopheles coluzzii
ACOM033140
I
0.883
ADIR005534
Anopheles dirus
ADIR005534
I
0.883
AMEM008752
Anopheles merus
AMEM008752
I
0.883
AMIN004130
Anopheles minimus
AMIN004130
I
0.883
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
0.883
ASTEI03690
Anopheles stephensi
ASTEI03690
I
0.883
AARA011580
Anopheles arabiensis
AARA011580
I
0.883
AATE006049
Anopheles atroparvus
AATE006049
I
0.881
ASIS011648
Anopheles sinensis
ASIS011648
I
0.881
AEPI000232
Anopheles epiroticus
AEPI000232
I
0.881
GK14276
Drosophila willistoni
FBgn0216282
I
0.880
PHUM460970
Pediculus humanus
PHUM460970
I
0.877
HelroG99849
Helobdella robusta
HelroG99849
I
0.876
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.875
HHAL000201-PA
Halyomorpha halys
HHAL000201-PA
I
0.875
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.873
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.873
GB52904
Apis mellifera
GB52904
I
0.873
CGI_10007907
Crassostrea gigas
CGI_10007907
I
0.873
HR96
Aedes aegypti
AAEL007202
I
0.873
CPIJ016038
Culex quinquefasciatus
CPIJ016038
I
0.873
NV10187
Nasonia vitripennis
NV10187
I
0.873
CpipJ_CPIJ016038
Culex pipiens
CpipJ_CPIJ016038
I
0.873
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
0.863
tetur17g03630
Tetranychus urticae
tetur17g03630
I
0.858
tetur34g00750
Tetranychus urticae
tetur34g00750
I
0.853
YQE_04331
Dendroctonus ponderosae
YQE_04331
I
0.852
TC010645
Tribolium castaneum
TC010645
I
0.850
EEL_0000817201
Elaeophora elaphi
EEL_0000817201
I
0.849
Bm3787
Brugia malayi
Bm3787
I
0.849
WUBG_13334
Wuchereria bancrofti
WUBG_13334
I
0.849
SMAR007355
Strigamia maritima
SMAR007355
I
0.848
ACEP16468
Atta cephalotes
ACEP16468
I
0.843
nAv.1.0.1.g10286
Acanthocheilonema viteae
nAv.1.0.1.g10286
I
0.842
CBN26095
Caenorhabditis brenneri
CBN26095
I
0.836
HMEL016865
Heliconius melpomene
HMEL016865
I
0.835
KGM_05575
Danaus plexippus
KGM_05575
I
0.835
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
0.835
CLEC000589
Cimex lectularius
CLEC000589
I
0.830
Ocbimv22015876m.g
Octopus bimaculoides
Ocbimv22015876m.g
I
0.818
RPRC001794
Rhodnius prolixus
RPRC001794
I
0.816
LotgiG100616
Lottia gigantea
LotgiG100616
I
0.815
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
0.805
Ocbimv22006473m.g
Octopus bimaculoides
Ocbimv22006473m.g
I
0.805
MCINX005291
Melitaea cinxia
MCINX005291
I
0.794
ISCW009328
Ixodes scapularis
ISCW009328
I
0.789
CGI_10027031
Crassostrea gigas
CGI_10027031
I
0.759
Ocbimv22029529m.g
Octopus bimaculoides
Ocbimv22029529m.g
I
0.752
scaffold889-EXSNAP2012.10
Pristionchus exspectatus
scaffold889-EXSNAP2012.10
I
0.750
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.749
L898_g1817
Steinernema monticolum
L898_g1817
I
0.749
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.749
Ppa-nhr-8
Pristionchus pacificus
PPA17111
I
0.747
RSKR_0000789200
Rhabditophanes kr3021
RSKR_0000789200
I
0.747